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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGGAAACGAGGAAGAAAAAGGAAGTGCAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCAAAGGTAAAAAACCAATACACATAAAACCCTTTTACATCAATTTCTTTATTCTATGATGATGATGATGATGATACGATATTCGATTTCATTTTGATTTGATTTGATTTTTGAATGCGCCTCTCTCTTTGACAAAAACCCTTCCAAAATCCCCTTCAATTACAACTCTTTTTCTCTCTTCTTTTAGATCTCGCTGTTCCTATTTCTTGTTTGTCTGCCTACCAAACGCTTGTTTGTGAAACCCCTTTTCTTCTCTATTGTATCCTCTTTTTGATACAAACGTTATTTGTTGGGTTTTGCCCTTTGCTTGGATGGTGGGGTTTTCCTGCTTTTTTTTTTTCTTTCTTGTATTCTTTTCTTGATTCCTTTAACATATTTTTATCCGTTTCTTTACAGATTCTACTGCTCTTGATTGTATTTCTTTAATTTATAATTCGTGCTTCACGCACCCACATGCATGTTTTTGGGTTTGTCTGATCTGGATTGGATCACAAGGATCTTATGTTCTTTTTCTACTTGCAGAGAGAGATAGAGAGAGAGTAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGAGTCATGGAAGAAGCAAACAGGAGGAGGAGAAGGTAAGTTTTCTTGA mRNA sequence ATGGGGAAACGAGGAAGAAAAAGGAAGTGCAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCAAAGAGAGAGATAGAGAGAGAGTAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGAGTCATGGAAGAAGCAAACAGGAGGAGGAGAAGGTAAGTTTTCTTGA Coding sequence (CDS) ATGGGGAAACGAGGAAGAAAAAGGAAGTGCAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCAAAGAGAGAGATAGAGAGAGAGTAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGAGTCATGGAAGAAGCAAACAGGAGGAGGAGAAGGTAAGTTTTCTTGA Protein sequence MGKRGRKRKCKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLKERDRERVRGWGLGSFPAILVSRERESWKKQTGGGEGKFS*
Homology
BLAST of Chy6G109150.1 vs. ExPASy TrEMBL
Match: A0A0A0L4R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132600 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0 Query: 1 MGKRGRKRKCKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLKERDRERVRG 60 MGKRGRKRK KCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLL+ER ER RG Sbjct: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
Query: 61 WGLGSFPAILVSRERESWKKQTGGGEGKFS 91 WGLGSFPAILVSRER SWKKQTGGG GKFS Sbjct: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 90
BLAST of Chy6G109150.1 vs. NCBI nr
Match: KGN56758.1 (hypothetical protein Csa_009575 [Cucumis sativus]) HSP 1 Score: 169 bits (429), Expect = 8.21e-53 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0 Query: 1 MGKRGRKRKCKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLKERDRERVRG 60 MGKRGRKRK KCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLL+ER ER RG Sbjct: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
Query: 61 WGLGSFPAILVSRERESWKKQTGGGEGKFS 90 WGLGSFPAILVSRER SWKKQTGGG GKFS Sbjct: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 90
BLAST of Chy6G109150.1 vs. NCBI nr
Match: KAG7028774.1 (hypothetical protein SDJN02_09955, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 48.9 bits (115), Expect = 1.66e-04 Identity = 34/59 (57.63%), Postives = 39/59 (66.10%), Query Frame = 0 Query: 15 LLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLKE---RDRERVRGWGLGSFPAIL 70 LL WLTWRLSI D LSSSDF+L S+ FLS+K E R+R+RV GLGSF L Sbjct: 13 LLLWLTWRLSIMDNLSSSDFLLDSSL-FLSDKGFQFAEIILRERKRV---GLGSFSPNL 67
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L4R3 | 3.9e-39 | 92.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132600 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN56758.1 | 8.21e-53 | 92.22 | hypothetical protein Csa_009575 [Cucumis sativus] | [more] |
KAG7028774.1 | 1.66e-04 | 57.63 | hypothetical protein SDJN02_09955, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Chy6G109150.1.exon2 | Chy6G109150.1.exon2 | exon |
Chy6G109150.1.exon1 | Chy6G109150.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Chy6G109150.1.cds2 | Chy6G109150.1.cds2 | CDS |
Chy6G109150.1.cds1 | Chy6G109150.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Chy6G109150.1 | Chy6G109150.1-protein | polypeptide |
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