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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGGTAGTCAACTCAGCTTTAGCTTTGAAAAGGCAGACAACTCGACTTGGACGTGGATAAGGCAACCGACTCGTATACAAATGGATAAGGGAATGAAGACTCTTCCAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA mRNA sequence ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA Coding sequence (CDS) ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA Protein sequence MNKEAVDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLARTSKEGTLLNFGVEKLNLDTVSNEGLVTVGFIERRRMTTGSGLRCQ*
Homology
BLAST of Chy4G075410.1 vs. ExPASy TrEMBL
Match: A0A0A0LE52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633790 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13 Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0
Query: 1 MNKEAVDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLA 60
MN+EA+D V SDKGSMV+GQQGVAAD++YKEGAQL FLL QLE RR GQ RAEKRRL
Sbjct: 1 MNEEAMDNVMSDKGSMVSGQQGVAADSLYKEGAQLSFLLPTQLEWRRVGQHGRAEKRRLT 60
Query: 61 RTS 64
+TS
Sbjct: 61 QTS 63
BLAST of Chy4G075410.1 vs. NCBI nr
Match: KAE8650859.1 (hypothetical protein Csa_000786 [Cucumis sativus]) HSP 1 Score: 79.3 bits (194), Expect = 4.10e-17 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
Query: 6 VDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLARTS 63
+D V SDKGSMV+GQQGVAAD++YKEGAQL FLL QLE RR GQ RAEKRRL +TS
Sbjct: 1 MDNVMSDKGSMVSGQQGVAADSLYKEGAQLSFLLPTQLEWRRVGQHGRAEKRRLTQTS 58
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LE52 | 1.1e-13 | 74.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633790 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650859.1 | 4.10e-17 | 74.14 | hypothetical protein Csa_000786 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy4G075410.1.exon2 | Chy4G075410.1.exon2 | exon |
| Chy4G075410.1.exon1 | Chy4G075410.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy4G075410.1.cds2 | Chy4G075410.1.cds2 | CDS |
| Chy4G075410.1.cds1 | Chy4G075410.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy4G075410.1 | Chy4G075410.1-protein | polypeptide |
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