Chy4G075410 (gene) Cucumber (hystrix) v1

Overview
NameChy4G075410
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 10697416 .. 10697841 (-)
RNA-Seq ExpressionChy4G075410
SyntenyChy4G075410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGGTAGTCAACTCAGCTTTAGCTTTGAAAAGGCAGACAACTCGACTTGGACGTGGATAAGGCAACCGACTCGTATACAAATGGATAAGGGAATGAAGACTCTTCCAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA

mRNA sequence

ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA

Coding sequence (CDS)

ATGAACAAAGAAGCAGTGGACAAAGTCACGTCAGACAAAGGAAGCATGGTCGCTGGGCAACAAGGGGTCGCCGCAGACAACATGTACAAGGAGGGTGCTCAGCTAGGCTTCTTGCTTTCGATGCAGCTTGAACGAAGAAGAGGAGGTCAGCGCAGACGAGCGGAGAAGAGGAGACTAGCACGGACGAGCAAAGAAGGCACGCTACTCAACTTTGGCGTGGAGAAGCTCAACCTTGACACAGTGTCAAACGAAGGACTCGTGACAGTTGGCTTCATCGAACGGAGACGCATGACGACCGGAAGTGGGCTGAGGTGTCAGTGA

Protein sequence

MNKEAVDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLARTSKEGTLLNFGVEKLNLDTVSNEGLVTVGFIERRRMTTGSGLRCQ*
Homology
[Close]
BLAST of Chy4G075410 vs. ExPASy TrEMBL
Match: A0A0A0LE52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633790 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 1  MNKEAVDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLA 60
          MN+EA+D V SDKGSMV+GQQGVAAD++YKEGAQL FLL  QLE RR GQ  RAEKRRL 
Sbjct: 1  MNEEAMDNVMSDKGSMVSGQQGVAADSLYKEGAQLSFLLPTQLEWRRVGQHGRAEKRRLT 60

Query: 61 RTS 64
          +TS
Sbjct: 61 QTS 63

[Close]
BLAST of Chy4G075410 vs. NCBI nr
Match: KAE8650859.1 (hypothetical protein Csa_000786 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 4.10e-17
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0 

Query: 6  VDKVTSDKGSMVAGQQGVAADNMYKEGAQLGFLLSMQLERRRGGQRRRAEKRRLARTS 63
          +D V SDKGSMV+GQQGVAAD++YKEGAQL FLL  QLE RR GQ  RAEKRRL +TS
Sbjct: 1  MDNVMSDKGSMVSGQQGVAADSLYKEGAQLSFLLPTQLEWRRVGQHGRAEKRRLTQTS 58

The following BLAST results are available for this feature:
BLAST of Chy4G075410 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G075410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE521.1e-1374.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G633790 PE=4 SV=1[more]
BLAST of Chy4G075410 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650859.14.10e-1774.14hypothetical protein Csa_000786 [Cucumis sativus][more]
BLAST of Chy4G075410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G075410.1Chy4G075410.1mRNA