Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGATACGGTCATATGAATTCTTGTGATTTCTGTTGCATTTCCCCCTTAAAAAGAAAGATTTTTTTTTTTTTTTTTTTAATTGGGAGGAACAGAGTCAACGACAGAGTTGTGACGGTCGGAAGGGCCGGAAGGAGGAATCGGAACGCCTCTGGGAAGAAAGCTGAAGGTCTGGCCGACATATCGGAAGCCAGTCTTGTAATTGAAATAAGAATTCGACATGTCGGAATTATTCATCCCATGATGTTCCATCATTTTACCCGGCCGAGTTGCAGAGGAAAACCCAGAAAGAAGAAGAAGAAAGATGAAAATGGCGATGGGATTGAGTTTGCATTGGAAGAAAGAAGAAGAAGAAGGCATTGTGTGTTATGAAAGAACTAATTGCATGGGGAATTATTAATATAAAGGAGTATTTATAATAGGGAAATAAAAGGTCAACGGGGATTCTAATGTAAAGGACGTTAATTTCGCAGGATTGCGTTACAAAATTTCAAATATAATTTTGGTTTTTGTTGAATATTGGGAATGGGGTTTTTCGTGGAAAGTTAAATGGGCTAAGTCATGTGAATGGGAAAATTGGAATGTTTTTGGTTTGTGTGGAGAGGGCTTGCTTGTTTAATTGCTTTTGCCTTTCCTCTCCTCTCCTCTTCTTATTTATTAAGCCTTCCCTTATTTGAAACTTTCCTCTTTATTTTATTTCAATACATTTCGTCAAAAC mRNA sequence ATGATACGAGTCAACGACAGAGTTGTGACGGTCGGAAGGGCCGGAAGGAGGAATCGGAACGCCTCTGGGAAGAAAGCTGAAGGTCTGGCCGACATATCGGAAGCCAGTCTTGTAATTGAAATAAGAATTCGACATGTCGGAATTATTCATCCCATGATGTTCCATCATTTTACCCGGCCGAGTTGCAGAGGAAAACCCAGAAAGAAGAAGAAGAAAGATGAAAATGGCGATGGGATTGAGTTTGCATTGGAAGAAAGAAGAAGAAGAAGGCATTGTGTGTTATGAAAGAACTAATTGCATGGGGAATTATTAATATAAAGGAGTATTTATAATAGGGAAATAAAAGGTCAACGGGGATTCTAATGTAAAGGACGTTAATTTCGCAGGATTGCGTTACAAAATTTCAAATATAATTTTGGTTTTTGTTGAATATTGGGAATGGGGTTTTTCGTGGAAAGTTAAATGGGCTAAGTCATGTGAATGGGAAAATTGGAATGTTTTTGGTTTGTGTGGAGAGGGCTTGCTTGTTTAATTGCTTTTGCCTTTCCTCTCCTCTCCTCTTCTTATTTATTAAGCCTTCCCTTATTTGAAACTTTCCTCTTTATTTTATTTCAATACATTTCGTCAAAAC Coding sequence (CDS) ATGATACGAGTCAACGACAGAGTTGTGACGGTCGGAAGGGCCGGAAGGAGGAATCGGAACGCCTCTGGGAAGAAAGCTGAAGGTCTGGCCGACATATCGGAAGCCAGTCTTGTAATTGAAATAAGAATTCGACATGTCGGAATTATTCATCCCATGATGTTCCATCATTTTACCCGGCCGAGTTGCAGAGGAAAACCCAGAAAGAAGAAGAAGAAAGATGAAAATGGCGATGGGATTGAGTTTGCATTGGAAGAAAGAAGAAGAAGAAGGCATTGTGTGTTATGA Protein sequence MIRVNDRVVTVGRAGRRNRNASGKKAEGLADISEASLVIEIRIRHVGIIHPMMFHHFTRPSCRGKPRKKKKKDENGDGIEFALEERRRRRHCVL
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 58..79 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC05G105420.1-exon | CcUC05G105420.1-exon-CicolChr05:32906950..32907572 | exon |
| CcUC05G105420.1-exon | CcUC05G105420.1-exon-CicolChr05:32907658..32907665 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC05G105420.1-three_prime_utr | CcUC05G105420.1-three_prime_utr-CicolChr05:32906950..32907295 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC05G105420.1-cds | CcUC05G105420.1-cds-CicolChr05:32907296..32907572 | CDS |
| CcUC05G105420.1-cds | CcUC05G105420.1-cds-CicolChr05:32907658..32907665 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC05G105420.1 | CcUC05G105420.1-protein | polypeptide |
|
