Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTATTATCCAATTAGGGCTTCATTTGACTATGGAATAAGTTTCCTTCTTCTCCCGCCAACAGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGGTACGTTCAAATTTGAGATGAATAATTACGCTATCTGTTACTGAAGTTGCACGGTCCTTCTCGAAATGCTGATTTATGTGTTAATTCTTCAATGGATTTTAAAATCATTTAGTAGTCTCTAATTTTGAATCCTAAATATAGGCTTGAAAGCATTCTGGAGTAGTAAATTGTAGCATATTTCAGAGAATCGAAGTCCGGAGAAGTTTGGAGTCTGTAAACACATGGTTCAGGATTTTTTTTTTTTTCGTTTACCAGTTGTTTGGGAGCTCTTTGAAAGATAATGAAATTTTCCTAATTGTATTGTAGTTTGTTTGGGTAGATATGGCTTACTTTCTAGAATCGAAGTTGTTCCTTCCTTCTACAGATCATATAGGATCATGAGCACTGGTCTCAAATGTTCAATAAAATCTTACATTCCTAAATAGAACTAGACTTGGAAACTAAATCTTGTAAGGTGCTTCGGAGTTGCAACAATTTGTTGCGTGAGAATACAAGCCTCCGAACCGTCTGGTCGATGTTATATTGTCTTGAACAGTTAAGTTCAAGTTGATACAATTTAGAAGTTCCTTTTGATAATAGTTTTCAAATAGCAAACGCTTAGCCTTCCGTTGGCTGCTTTGTGATAAGATGCCGGGGTGCTAAACTTGGCCTAAGACTTACTTTATGAACTTACTTTATGCTTAATTTTCTTCCAGATTTATCCACCTCTCGGTCTATAAATCCATTCCATTGTTGTCCAATATGATTCTCGTGCAGACTTATTACAATTTTAAGATACCTTTGTATTGAGTCAGATGAAATTTCCCTTTGAGTTCTGAGAGGTACGATTTGATGATGGGATGACATTCTCTTTGAATCGTACAACATATGACTGCATAGTTAGTCATTGAGGTTTACCTTTGAGTAACTCTATGATACTTGTTACTTAACTGATCAATTAGAGCTCTTTTGTATATGATTTGACTATTTGGTTTGGACGTTATCAGAGGGTTTTACTTTATAAATCACTCCCTTAGATTGCTTGTATGGATGTTCCCGTCTACTTTATAAATCATATTTCAGTCAAGGTTACATTTTCACACTAGCTCTCTTGTAGTTATTTGTAACTAAACAAGTAATGAAGTACCCTCGGAATTTTAAAGTATTCGTGTCGTGCTTTGATTTTTATCTCATTTTTAGTTGTGTGTTGCGTTAACCTTTGCCAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATGGTGTCTTGGAAGAGAATAGAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCAGAGATCCTATTTTTCTGTCTCATGTGCTTTAGGATTGCTTTGTAACGTTTATGCAGAAAGATGATGAATTAAAGATATATGATTGGTTCCACGTCAATTATTGACTAATAAACCAAAATGAGGAC
mRNA sequence
CACTATTATCCAATTAGGGCTTCATTTGACTATGGAATAAGTTTCCTTCTTCTCCCGCCAACAGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATGGTGTCTTGGAAGAGAATAGAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCAGAGATCCTATTTTTCTGTCTCATGTGCTTTAGGATTGCTTTGTAACGTTTATGCAGAAAGATGATGAATTAAAGATATATGATTGGTTCCACGTCAATTATTGACTAATAAACCAAAATGAGGAC
Coding sequence (CDS)
ATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAA
Protein sequence
MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNVPNDVPDELVEEASEDDNEITEKPQVKTKKTKVT*
Homology
BLAST of CSPI01G33270.1 vs. ExPASy TrEMBL
Match:
A0A0A0M0V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 5.6e-41
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93
BLAST of CSPI01G33270.1 vs. ExPASy TrEMBL
Match:
A0A5A7SX16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002390 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 19 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 78
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 79 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111
BLAST of CSPI01G33270.1 vs. ExPASy TrEMBL
Match:
A0A5D3DZN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00090 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 1 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93
BLAST of CSPI01G33270.1 vs. ExPASy TrEMBL
Match:
A0A1S3B8U1 (uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 7 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 66
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 67 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99
BLAST of CSPI01G33270.1 vs. ExPASy TrEMBL
Match:
A0A6J1G9M3 (uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC111452065 PE=4 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDA A+E I PRVK S LGSE HLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 1 MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 60
Query: 61 PNDVPDELVEEASE-DDNEITEKPQVKTKKTKVT 94
PNDVPDEL+EEASE DD+E TEKPQVK+KKTK+T
Sbjct: 61 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 94
BLAST of CSPI01G33270.1 vs. NCBI nr
Match:
XP_011660264.1 (uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharacterized protein LOC105436354 [Cucumis sativus] >KGN66757.1 hypothetical protein Csa_007293 [Cucumis sativus])
HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93
BLAST of CSPI01G33270.1 vs. NCBI nr
Match:
TYK29223.1 (uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 1 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93
BLAST of CSPI01G33270.1 vs. NCBI nr
Match:
XP_008443784.1 (PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo])
HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 7 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 66
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 67 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99
BLAST of CSPI01G33270.1 vs. NCBI nr
Match:
KAA0035148.1 (uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa])
HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 19 MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 78
Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 79 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111
BLAST of CSPI01G33270.1 vs. NCBI nr
Match:
KAG7036645.1 (hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
MDA A+E I PRVK S LGSE HLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 104 MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 163
Query: 61 PNDVPDELVEEASE-DDNEITEKPQVKTKKTKVT 94
PNDVPDEL+EEASE DD+E TEKPQVK+KKTK+T
Sbjct: 164 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 197
BLAST of CSPI01G33270.1 vs. TAIR 10
Match:
AT1G47820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
M+ + +P + VKV LG+E++ +++ T+ +QL SMKE+SM ILK++ITKHNV
Sbjct: 1 MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60
Query: 61 P-NDVPDELV---EEASEDDNEITEKPQVKTKKTKV 93
P +DVPD+++ EE +DD P KKTK+
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTKI 96
BLAST of CSPI01G33270.1 vs. TAIR 10
Match:
AT1G47820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 1 MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
M+ + +P + VKV LG+E++ +++ T+ +QL SMKE+SM ILK++ITKHNV
Sbjct: 1 MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60
Query: 61 P-NDVPDELV---EEASEDDNEITEKPQVKTKKTKV 93
P +DVPD+++ EE +DD P KKTK+
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTKI 96
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0M0V3 | 5.6e-41 | 97.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1 | [more] |
A0A5A7SX16 | 4.0e-39 | 94.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DZN8 | 4.0e-39 | 94.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B8U1 | 4.0e-39 | 94.62 | uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=... | [more] |
A0A6J1G9M3 | 1.3e-29 | 80.85 | uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC1114520... | [more] |
Match Name | E-value | Identity | Description | |
XP_011660264.1 | 1.2e-40 | 97.85 | uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharact... | [more] |
TYK29223.1 | 8.2e-39 | 94.62 | uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa] | [more] |
XP_008443784.1 | 8.2e-39 | 94.62 | PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo] | [more] |
KAA0035148.1 | 8.2e-39 | 94.62 | uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa] | [more] |
KAG7036645.1 | 2.7e-29 | 80.85 | hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT1G47820.1 | 7.0e-12 | 41.67 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G47820.2 | 7.0e-12 | 41.67 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |