CSPI01G33270 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G33270
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 28159849 .. 28161945 (+)
RNA-Seq ExpressionCSPI01G33270
SyntenyCSPI01G33270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTATTATCCAATTAGGGCTTCATTTGACTATGGAATAAGTTTCCTTCTTCTCCCGCCAACAGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGGTACGTTCAAATTTGAGATGAATAATTACGCTATCTGTTACTGAAGTTGCACGGTCCTTCTCGAAATGCTGATTTATGTGTTAATTCTTCAATGGATTTTAAAATCATTTAGTAGTCTCTAATTTTGAATCCTAAATATAGGCTTGAAAGCATTCTGGAGTAGTAAATTGTAGCATATTTCAGAGAATCGAAGTCCGGAGAAGTTTGGAGTCTGTAAACACATGGTTCAGGATTTTTTTTTTTTTCGTTTACCAGTTGTTTGGGAGCTCTTTGAAAGATAATGAAATTTTCCTAATTGTATTGTAGTTTGTTTGGGTAGATATGGCTTACTTTCTAGAATCGAAGTTGTTCCTTCCTTCTACAGATCATATAGGATCATGAGCACTGGTCTCAAATGTTCAATAAAATCTTACATTCCTAAATAGAACTAGACTTGGAAACTAAATCTTGTAAGGTGCTTCGGAGTTGCAACAATTTGTTGCGTGAGAATACAAGCCTCCGAACCGTCTGGTCGATGTTATATTGTCTTGAACAGTTAAGTTCAAGTTGATACAATTTAGAAGTTCCTTTTGATAATAGTTTTCAAATAGCAAACGCTTAGCCTTCCGTTGGCTGCTTTGTGATAAGATGCCGGGGTGCTAAACTTGGCCTAAGACTTACTTTATGAACTTACTTTATGCTTAATTTTCTTCCAGATTTATCCACCTCTCGGTCTATAAATCCATTCCATTGTTGTCCAATATGATTCTCGTGCAGACTTATTACAATTTTAAGATACCTTTGTATTGAGTCAGATGAAATTTCCCTTTGAGTTCTGAGAGGTACGATTTGATGATGGGATGACATTCTCTTTGAATCGTACAACATATGACTGCATAGTTAGTCATTGAGGTTTACCTTTGAGTAACTCTATGATACTTGTTACTTAACTGATCAATTAGAGCTCTTTTGTATATGATTTGACTATTTGGTTTGGACGTTATCAGAGGGTTTTACTTTATAAATCACTCCCTTAGATTGCTTGTATGGATGTTCCCGTCTACTTTATAAATCATATTTCAGTCAAGGTTACATTTTCACACTAGCTCTCTTGTAGTTATTTGTAACTAAACAAGTAATGAAGTACCCTCGGAATTTTAAAGTATTCGTGTCGTGCTTTGATTTTTATCTCATTTTTAGTTGTGTGTTGCGTTAACCTTTGCCAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATGGTGTCTTGGAAGAGAATAGAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCAGAGATCCTATTTTTCTGTCTCATGTGCTTTAGGATTGCTTTGTAACGTTTATGCAGAAAGATGATGAATTAAAGATATATGATTGGTTCCACGTCAATTATTGACTAATAAACCAAAATGAGGAC

mRNA sequence

CACTATTATCCAATTAGGGCTTCATTTGACTATGGAATAAGTTTCCTTCTTCTCCCGCCAACAGAAAACCTTCCCAGTTCATTAGTCTTTCAATCGTTCAATTTCCTTTTTTTATCTCTTATCCCCATTTCTTGCTGTTTCCACTCTATTCAAGAACAAGATCGATACTGCAACGGAGTTTATTGATTTGTCCTCTACAGACTCAATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAATTTCTCTCTCTGTTCATGGGCCAAACCCTGAAATTCTAAAGAACAAAAATGGTGTCTTGGAAGAGAATAGAGAACGTAACTTTAAGTTCATTAGTGTTCTCTAAATGTGCTTGGTCTGTGTCATTTGTTCGTTTCAATACCTTGGACCCCTTTTCTGATTCTAAGTTCTAACTAGTTTCCCTCTCCTTCATTTTCATTTTTCATGATTAGGGAAAATTAATAGCATTGAAAGATTCAAACCAATGTGGAATTAGATGTATTTAGTTTAAATTATTAATCAGAGATCCTATTTTTCTGTCTCATGTGCTTTAGGATTGCTTTGTAACGTTTATGCAGAAAGATGATGAATTAAAGATATATGATTGGTTCCACGTCAATTATTGACTAATAAACCAAAATGAGGAC

Coding sequence (CDS)

ATGGATGCCCCAGCTGAAGAAGACATTCCTCTAAGGCCTCGGGTTAAGGTCTCACTTTGCCTAGGATCAGAGACACATTTGGTCAATACAGCTAATAAAGGCACCCTTTCTGAGCAGCTGACTTCCATGAAAGAGGATAGCATGGCCATTTTGAAGGAGTACATAACCAAACATAATGTTCCTAATGATGTCCCGGACGAACTAGTTGAAGAAGCTTCTGAGGACGATAATGAAATCACTGAAAAACCTCAAGTGAAGACAAAGAAGACAAAAGTAACATAA

Protein sequence

MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNVPNDVPDELVEEASEDDNEITEKPQVKTKKTKVT*
Homology
[Close]
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match: A0A0A0M0V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.6e-41
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match: A0A5A7SX16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002390 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 19  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 78

Query: 61  PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
           PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 79  PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111

[Close]
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match: A0A5D3DZN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00090 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match: A0A1S3B8U1 (uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 7  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 66

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 67 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99

[Close]
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match: A0A6J1G9M3 (uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC111452065 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDA A+E I   PRVK S  LGSE HLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 1  MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASE-DDNEITEKPQVKTKKTKVT 94
          PNDVPDEL+EEASE DD+E TEKPQVK+KKTK+T
Sbjct: 61 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 94

[Close]
BLAST of CSPI01G33270 vs. NCBI nr
Match: XP_011660264.1 (uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharacterized protein LOC105436354 [Cucumis sativus] >KGN66757.1 hypothetical protein Csa_007293 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of CSPI01G33270 vs. NCBI nr
Match: TYK29223.1 (uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 1  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 60

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 61 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 93

[Close]
BLAST of CSPI01G33270 vs. NCBI nr
Match: XP_008443784.1 (PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 7  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 66

Query: 61 PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
          PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 67 PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 99

[Close]
BLAST of CSPI01G33270 vs. NCBI nr
Match: KAA0035148.1 (uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           MDAPAEEDIPLRPRVKVS CLGSE HLVNTANKGTLSEQL SMKEDSMAILKEYITKHNV
Sbjct: 19  MDAPAEEDIPLRPRVKVSFCLGSEIHLVNTANKGTLSEQLISMKEDSMAILKEYITKHNV 78

Query: 61  PNDVPDELVEEASEDDNEITEKPQVKTKKTKVT 94
           PNDVPDELVEEASEDD+EITEKPQVK KKTKVT
Sbjct: 79  PNDVPDELVEEASEDDDEITEKPQVKAKKTKVT 111

[Close]
BLAST of CSPI01G33270 vs. NCBI nr
Match: KAG7036645.1 (hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 0 

Query: 1   MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
           MDA A+E I   PRVK S  LGSE HLVNTANKGTLSEQL SMKE+SMAILKEYITKHNV
Sbjct: 104 MDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNV 163

Query: 61  PNDVPDELVEEASE-DDNEITEKPQVKTKKTKVT 94
           PNDVPDEL+EEASE DD+E TEKPQVK+KKTK+T
Sbjct: 164 PNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT 197

[Close]
BLAST of CSPI01G33270 vs. TAIR 10
Match: AT1G47820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+  +   +P +  VKV   LG+E++ +++    T+ +QL SMKE+SM ILK++ITKHNV
Sbjct: 1  MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60

Query: 61 P-NDVPDELV---EEASEDDNEITEKPQVKTKKTKV 93
          P +DVPD+++   EE  +DD      P    KKTK+
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTKI 96

[Close]
BLAST of CSPI01G33270 vs. TAIR 10
Match: AT1G47820.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47813.1); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 1  MDAPAEEDIPLRPRVKVSLCLGSETHLVNTANKGTLSEQLTSMKEDSMAILKEYITKHNV 60
          M+  +   +P +  VKV   LG+E++ +++    T+ +QL SMKE+SM ILK++ITKHNV
Sbjct: 1  MEIESHVSVPGKNLVKVEFKLGTESYTIDSIKGDTVLDQLVSMKEESMKILKDFITKHNV 60

Query: 61 P-NDVPDELV---EEASEDDNEITEKPQVKTKKTKV 93
          P +DVPD+++   EE  +DD      P    KKTK+
Sbjct: 61 PDDDVPDQILSDDEEGDDDDASPVICPVKPPKKTKI 96

The following BLAST results are available for this feature:
BLAST of CSPI01G33270 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G33270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0V35.6e-4197.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1[more]
A0A5A7SX164.0e-3994.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DZN84.0e-3994.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B8U14.0e-3994.62uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=... [more]
A0A6J1G9M31.3e-2980.85uncharacterized protein LOC111452065 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
BLAST of CSPI01G33270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660264.11.2e-4097.85uncharacterized protein LOC105436354 [Cucumis sativus] >XP_031736764.1 uncharact... [more]
TYK29223.18.2e-3994.62uncharacterized protein E5676_scaffold1228G00090 [Cucumis melo var. makuwa][more]
XP_008443784.18.2e-3994.62PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo][more]
KAA0035148.18.2e-3994.62uncharacterized protein E6C27_scaffold57G002390 [Cucumis melo var. makuwa][more]
KAG7036645.12.7e-2980.85hypothetical protein SDJN02_00265, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CSPI01G33270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47820.17.0e-1241.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G47820.27.0e-1241.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..93
NoneNo IPR availablePANTHERPTHR37194T2E6.7-RELATEDcoord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G33270.1CSPI01G33270.1mRNA