Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGACATATTGGCCAAGAAGCATGAGGGCATGATTACCGCCAAAGAAATAATGGATTCTGTGCAGGGTATGTTTGGACAACAATCCACACAAGCCCGACATAATGCCCTAAAGTACATATTCAACTCGAGGATGCCAGAGGGTACATCTGTTCGAGATCATGTCCTGGATATGATGGTGCACTTTAACATCGCGGAGTCGAATGGTGCTTCCATCGATGAGTCGAGCTAG
mRNA sequence
ATGTCTGACATATTGGCCAAGAAGCATGAGGGCATGATTACCGCCAAAGAAATAATGGATTCTGTGCAGGGTATGTTTGGACAACAATCCACACAAGCCCGACATAATGCCCTAAAGTACATATTCAACTCGAGGATGCCAGAGGGTACATCTGTTCGAGATCATGTCCTGGATATGATGGTGCACTTTAACATCGCGGAGTCGAATGGTGCTTCCATCGATGAGTCGAGCTAG
Coding sequence (CDS)
ATGTCTGACATATTGGCCAAGAAGCATGAGGGCATGATTACCGCCAAAGAAATAATGGATTCTGTGCAGGGTATGTTTGGACAACAATCCACACAAGCCCGACATAATGCCCTAAAGTACATATTCAACTCGAGGATGCCAGAGGGTACATCTGTTCGAGATCATGTCCTGGATATGATGGTGCACTTTAACATCGCGGAGTCGAATGGTGCTTCCATCGATGAGTCGAGCTAG
Protein sequence
MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMMVHFNIAESNGASIDESS
Homology
BLAST of Tan0019196 vs. NCBI nr
Match:
XP_022152352.1 (uncharacterized protein LOC111020095 [Momordica charantia])
HSP 1 Score: 120.2 bits (300), Expect = 8.0e-24
Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+SD+LAKKHE ITAKEIMDS+Q MFGQ S+QARH ALK+I+NSRM EG+SVR+HVL++M
Sbjct: 77 ISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNSRMKEGSSVREHVLNLM 136
Query: 61 VHFNIAESNGASIDE 76
VHFN+AESNGA IDE
Sbjct: 137 VHFNVAESNGAVIDE 151
BLAST of Tan0019196 vs. NCBI nr
Match:
XP_022158197.1 (uncharacterized protein LOC111024734 [Momordica charantia])
HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+SD+LAKKHE +T KEIMDS+Q MFGQ S QARH ALK+++NSRM EG+SVR+HVL++M
Sbjct: 77 ISDVLAKKHEDTVTTKEIMDSLQSMFGQPSLQARHEALKFVYNSRMKEGSSVREHVLNLM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AESNG IDE S
Sbjct: 137 VHFNVAESNGIVIDEQS 153
BLAST of Tan0019196 vs. NCBI nr
Match:
KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 77 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 137 VHFNVAEMNGAVIDEAS 153
BLAST of Tan0019196 vs. NCBI nr
Match:
KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 76 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 135
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 136 VHFNVAEMNGAVIDEAS 152
BLAST of Tan0019196 vs. NCBI nr
Match:
TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 77 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 137 VHFNVAEMNGAVIDEAS 153
BLAST of Tan0019196 vs. ExPASy TrEMBL
Match:
A0A6J1DFZ2 (uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020095 PE=4 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 3.9e-24
Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+SD+LAKKHE ITAKEIMDS+Q MFGQ S+QARH ALK+I+NSRM EG+SVR+HVL++M
Sbjct: 77 ISDVLAKKHEDTITAKEIMDSLQSMFGQPSSQARHEALKFIYNSRMKEGSSVREHVLNLM 136
Query: 61 VHFNIAESNGASIDE 76
VHFN+AESNGA IDE
Sbjct: 137 VHFNVAESNGAVIDE 151
BLAST of Tan0019196 vs. ExPASy TrEMBL
Match:
A0A6J1DWL0 (uncharacterized protein LOC111024734 OS=Momordica charantia OX=3673 GN=LOC111024734 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 5.6e-23
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+SD+LAKKHE +T KEIMDS+Q MFGQ S QARH ALK+++NSRM EG+SVR+HVL++M
Sbjct: 77 ISDVLAKKHEDTVTTKEIMDSLQSMFGQPSLQARHEALKFVYNSRMKEGSSVREHVLNLM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AESNG IDE S
Sbjct: 137 VHFNVAESNGIVIDEQS 153
BLAST of Tan0019196 vs. ExPASy TrEMBL
Match:
A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 77 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 137 VHFNVAEMNGAVIDEAS 153
BLAST of Tan0019196 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 77 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 136
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 137 VHFNVAEMNGAVIDEAS 153
BLAST of Tan0019196 vs. ExPASy TrEMBL
Match:
A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 9.6e-23
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query: 1 MSDILAKKHEGMITAKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVRDHVLDMM 60
+S++LAKKHE M+TA+EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SVR+HVL+MM
Sbjct: 194 LSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMM 253
Query: 61 VHFNIAESNGASIDESS 78
VHFN+AE NGA IDE+S
Sbjct: 254 VHFNVAEMNGAVIDEAS 270
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DFZ2 | 3.9e-24 | 76.00 | uncharacterized protein LOC111020095 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6J1DWL0 | 5.6e-23 | 70.13 | uncharacterized protein LOC111024734 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A5A7SMH8 | 9.6e-23 | 70.13 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... | [more] |
A0A5D3CPJ6 | 9.6e-23 | 70.13 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... | [more] |
A0A5A7V4M1 | 9.6e-23 | 70.13 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093... | [more] |
Match Name | E-value | Identity | Description | |