Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAAGTCTAAGCATTCAATTCCCCGTTTCATCTCTTTCCTTATTAATAATCCCCTCTTCTCATTAAATTCCCACCGCTTTCCTTTTCCCTTAAGATCTTCAAATCCAAATCCTCCTTCCTTTTCCAATGGCCTCTCTCGTCCTTCTCCTCTCCGAACTCGTCCGCCACCACAACACCAATCCCGATTACTGGCTCACTCTTCCTCTTCCGCCGCCACCGCCGAGTGACTGTCACAACAACAGCCGGATCTCCGTCGATGAAACTCAAATGGATGAATTTCTCAAGGAATCTAGGGTTTGGGTTGATTTGATTTGGCCCTAGCTAATTTCAATTTCAACTTACTTCCACTCCTGGATTTTGCTTCCTTCTCCTTCTGTTCTTGCTTTGTAATGTCGATTTATTTGTTTTATCCTCAATTTCGAGGGGGAAATTTTCATCGATCTGTAAAGATAATGGTGGAAGTGAGTTCTATTTGCTGAAA
mRNA sequence
TCTAAGTCTAAGCATTCAATTCCCCGTTTCATCTCTTTCCTTATTAATAATCCCCTCTTCTCATTAAATTCCCACCGCTTTCCTTTTCCCTTAAGATCTTCAAATCCAAATCCTCCTTCCTTTTCCAATGGCCTCTCTCGTCCTTCTCCTCTCCGAACTCGTCCGCCACCACAACACCAATCCCGATTACTGGCTCACTCTTCCTCTTCCGCCGCCACCGCCGAGTGACTGTCACAACAACAGCCGGATCTCCGTCGATGAAACTCAAATGGATGAATTTCTCAAGGAATCTAGGGTTTGGGTTGATTTGATTTGGCCCTAGCTAATTTCAATTTCAACTTACTTCCACTCCTGGATTTTGCTTCCTTCTCCTTCTGTTCTTGCTTTGTAATGTCGATTTATTTGTTTTATCCTCAATTTCGAGGGGGAAATTTTCATCGATCTGTAAAGATAATGGTGGAAGTGAGTTCTATTTGCTGAAA
Coding sequence (CDS)
ATGGCCTCTCTCGTCCTTCTCCTCTCCGAACTCGTCCGCCACCACAACACCAATCCCGATTACTGGCTCACTCTTCCTCTTCCGCCGCCACCGCCGAGTGACTGTCACAACAACAGCCGGATCTCCGTCGATGAAACTCAAATGGATGAATTTCTCAAGGAATCTAGGGTTTGGGTTGATTTGATTTGGCCCTAG
Protein sequence
MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISVDETQMDEFLKESRVWVDLIWP
Homology
BLAST of Tan0016707 vs. NCBI nr
Match:
XP_038904495.1 (uncharacterized WD repeat-containing protein C2A9.03-like [Benincasa hispida])
HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPPP---------------PSD-CHNN-SRISV 57
MASLVLLLSEL+RHHNTNPDYWLT+PLPPPP PS+ C++N SRI
Sbjct: 1 MASLVLLLSELLRHHNTNPDYWLTIPLPPPPSPPRTSSSVAGKSLLPSERCYSNKSRICA 60
BLAST of Tan0016707 vs. NCBI nr
Match:
KAE8651190.1 (hypothetical protein Csa_001669 [Cucumis sativus])
HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNS 58
MASL+LLLS+L+RHH+TNPDY LTLP PP P SDC + +
Sbjct: 1 MASLLLLLSQLLRHHDTNPDYSLTLPSPPTTMPSSSSSSSAHGNSVLPRSDCCYANNYKT 60
BLAST of Tan0016707 vs. NCBI nr
Match:
KAG6580906.1 (hypothetical protein SDJN03_20908, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 68.2 bits (165), Expect = 3.0e-08
Identity = 33/36 (91.67%), Postives = 33/36 (91.67%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLP---PPPPS 34
MASLVLLLSELVRHHNTNPDYWLTLPLP PPPPS
Sbjct: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPSPTPPPPS 36
BLAST of Tan0016707 vs. NCBI nr
Match:
PON93800.1 (hypothetical protein TorRG33x02_105030 [Trema orientale])
HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 35/87 (40.23%), Postives = 43/87 (49.43%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS------------------ 60
MASL+LLLSELV HHN +PD+W+ L PP S ++S S
Sbjct: 1 MASLLLLLSELVSHHNEDPDFWVKLSSPPSSSSSSSSSSSSSSSSCAAAFAASSSTSVSK 60
Query: 61 -----VDETQMDEFLKESRVWVDLIWP 65
D + LKESRV VDL+WP
Sbjct: 61 ETKKCYDNVSDENDLKESRVCVDLVWP 87
BLAST of Tan0016707 vs. NCBI nr
Match:
PON39745.1 (hypothetical protein PanWU01x14_302520 [Parasponia andersonii])
HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV----------------- 60
MASL+LLLSELV HHN +PD+W+ L P S ++S +
Sbjct: 1 MASLLLLLSELVSHHNEDPDFWVKLSSPSSSSSSSSSSSSCAAAFAASSSTSPRKETKKC 60
Query: 61 -DETQMDEFLKESRVWVDLIWP 65
D + LKESRV VDL+WP
Sbjct: 61 HDNVSHENDLKESRVCVDLVWP 82
BLAST of Tan0016707 vs. ExPASy TrEMBL
Match:
A0A0A0LHI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822280 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 5.7e-13
Identity = 47/85 (55.29%), Postives = 53/85 (62.35%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNS 60
MASL+LLLS+L+RHH+TNPDY LTLP PP P SDC + +
Sbjct: 1 MASLLLLLSQLLRHHDTNPDYSLTLPSPPTTMPSSSSSSSAHGNSVLPRSDCCYANNYKT 60
Query: 61 RISVDETQMDEFLKESRVWVDLIWP 65
RI DE MDEFLKESRV VDLIWP
Sbjct: 61 RICADENVMDEFLKESRVCVDLIWP 85
BLAST of Tan0016707 vs. ExPASy TrEMBL
Match:
A0A2P5F7L7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_105030 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 5.2e-06
Identity = 35/87 (40.23%), Postives = 43/87 (49.43%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS------------------ 60
MASL+LLLSELV HHN +PD+W+ L PP S ++S S
Sbjct: 1 MASLLLLLSELVSHHNEDPDFWVKLSSPPSSSSSSSSSSSSSSSSCAAAFAASSSTSVSK 60
Query: 61 -----VDETQMDEFLKESRVWVDLIWP 65
D + LKESRV VDL+WP
Sbjct: 61 ETKKCYDNVSDENDLKESRVCVDLVWP 87
BLAST of Tan0016707 vs. ExPASy TrEMBL
Match:
A0A2P5AT80 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302520 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 0
Query: 1 MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV----------------- 60
MASL+LLLSELV HHN +PD+W+ L P S ++S +
Sbjct: 1 MASLLLLLSELVSHHNEDPDFWVKLSSPSSSSSSSSSSSSCAAAFAASSSTSPRKETKKC 60
Query: 61 -DETQMDEFLKESRVWVDLIWP 65
D + LKESRV VDL+WP
Sbjct: 61 HDNVSHENDLKESRVCVDLVWP 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038904495.1 | 8.2e-14 | 64.38 | uncharacterized WD repeat-containing protein C2A9.03-like [Benincasa hispida] | [more] |
KAE8651190.1 | 1.3e-08 | 51.28 | hypothetical protein Csa_001669 [Cucumis sativus] | [more] |
KAG6580906.1 | 3.0e-08 | 91.67 | hypothetical protein SDJN03_20908, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
PON93800.1 | 1.1e-05 | 40.23 | hypothetical protein TorRG33x02_105030 [Trema orientale] | [more] |
PON39745.1 | 2.4e-05 | 40.24 | hypothetical protein PanWU01x14_302520 [Parasponia andersonii] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LHI4 | 5.7e-13 | 55.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822280 PE=4 SV=1 | [more] |
A0A2P5F7L7 | 5.2e-06 | 40.23 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_105030 PE=4 SV... | [more] |
A0A2P5AT80 | 1.2e-05 | 40.24 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302520 PE... | [more] |
Match Name | E-value | Identity | Description | |