Tan0014039 (gene) Snake gourd v1

Overview


Name	Tan0014039
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Transmembrane protein 230
Location	LG11: 30082621 .. 30088666 (-)
RNA-Seq Expression	Tan0014039
Synteny	Tan0014039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGAATCTTTTGAATTGTCTGTTCTCTGGTTATATGGAAGGTTGTAAGATTTGTATGCATGTTCATTTTACCTCTTATTAAAGGAAAGAATAATTATAATAGATTATAGTGGAAAAAATTTATTCAAATTTATCACGGGAATCAGTCAAATCAGTCGAGTCTACCTCATTTTCTACTTTTTCAGGATTTGGGAAGAACCTGAGTAACTTGTTGAGGTTGAATGCATGAGATTTTTTCTTAGAACTATATTTTCACTTGTGCTTTCATTTTTCTCATGTCAATTGGTGGGTGATCATTGTAGTTTATGTGCATTTTGAGAAGGGTTATAATCCACTGTGTGCATTTATCATAAGTAATCATGTGAAAATTACAATTTTTCATCCTCCTCTTGATGTCTTTTTGATGTATTTGGTTTTTGATTTCAAAGGTGGCTTGATTTAGTTGAAATTTGAAGACTCCATTCTTGATAATCGCTGTCATGGCATCTAGACGGAATGTTCGTTACAGTTCCCTTGCCACTGATGATAACGATCTTGATTATGATGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAAATTCCGTGGAAGTCTATTGCTCTGGCTATCTTCTTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTACTGATAAAAAATTATGTTTCATAATTTCTTGAATGTAACTTTATCATTTATTTCCATTTTATGCAAAGTGTCTACTCATTTGGCTTTTGGATTTTGTTTGTTTTCTCTTTTTATAAATGTTGGCTGCTTATTGAGATGGTGAATAATATGAACTTGGCTTCTTTTGATTCTGATGATTTATTGCAGTTAATAAGTTATGAGTGAACTGGCTTCATTTTTTATCATTTGAATGATTTGTAGTATTTGTGGGAGTTGAAGTAAAAGAATTGAAAAGTATGGACTAGTCTATAATGTTGTCCATGGGAAGCCAGATAACCCAAAAGCTCCTCCAGTATTAGTTATCTCGACTGTTGTATTCTTTTTCAATGTGTTGCTCGTAATTATTAATGTAGTAATGTCTTTCTTTTATGAGAACAGCATCATACGAAATCTAGTTATAATGATATGGATTTCTTCCGCATATTTTAAACTCTGTTAAAAACTTAAACCTTCCTTTGTTTCTTATAGCTTCTGTTTTCAAGTAAAAATAGAGACACATCTAATAGGTCTTTCTGTTTCATGTCTTGACACATTTATTTTATGATAGATGGTCATTCAATAGCTATATGTCGTGTATCTTCAAAAGAAAAAAAAAACATAATCTTTTGAATTTTTGGAGATAATAAAATTTTTTCCCTTGATCTAATTTTTTTATGATTTCTCGGAGGATTGTTGGGTGGGTAATAAACCTCTTTGTGTTGTTTGTCCACGGTTATATCATATTTCGAGTAAGAAGTTGCATTTTGTGGGAGTATTACTTTCTTTTGATCCTCCCTTGTCTTTATCTTGGGGTTTTTGTCGTGCTCATACTGATAGAGAAGTGAGAGGTGGTGGATCTTCTTTTTATTATTTGGGAGATGGTTGTGACGCATGGGAGGGAGGAGAGACCTTGGTTTTGGTACCTTGATAGGTCGAGGAATTTTTTGTGTCAGTCTTATTTTAATTTTTTGGTTTTCCTTTCTCCTTCTCTTTCACCCTCTTCTTTCTCTCTGCTCTAGAAGGTTAAAATCCCTTGAAAAGTTAAGTTTTGGGTGTGGCAAGTTTTACATGGAAGAGTCAACAATTTGAACCGAGTTCAACGTCATTCCTGTTTAGTGTTATTCCCATGGTGGTGCGTTGTTCCCATGGTGGCACGTTCTTTTTAGGAGCCAGCTTGAGGACCTGTATCACTTACTTTGGGGTTGTCAGTTTGCTCAATCCTTGAGGGCTCATTCGCTTGTAGTCGTTTGGGTTTTTCTTGGCTTGGAATAGGGATTGTTATGCAGTGGTGGAGGGAGGTGCTTCTGAGCTCGCTCTTCTGTGAGAAGGGCAAAATCTTGTGGCATGCTAGCTTTTTTGCCATTTTGTGGGGTATTTGGCTTGAGCAAAGTAGATCTTTAGGGGCGCGGAGAGGTCTTGTAGTGAGGTTTAGGAGGTGGTGAGGTTTAATGCATAGTTGTGGGTTTTGGTCACAAAGCCTTTTGTGTAATTATGACATTGGCTTGCTGTTGCGTAAAATTATGTTGCAATACCGCAAGTGTACGGGTCAAGTTTTAGTATAGTGATTTAGAGTTCCAAGTATCGTCCTCGGGAATGGGTTTCTAGATTAATTAATTATTAAGGTACTAATTCTCAATTTTAGCTAAAGAAACATAACATGGATAGTTGGTTGAAATAAATACAAACAAACGAACAAACATGTGGAGACACAGATTGATAGATTTGGGAGAAGTGATTTTACAAGTTAAAAACCTAACTAACACATGCATTGAACCAATGAGATGAAATTATAAACAAGAAGTGAAATACTCAAGAAAATCTCTCGATTCTTAGTGAGTCTCACACATGAAATAAACTCATAGTCTCCATATGAACCTACAACATGCATGGCATTAAGCAACTTCTTTATGTGTTTCCCTAAGATTTCTAGGTCACTCGTGCGGACTTCCAAGGGTTTTGACAATTTTGCTCTAATTCAAGCTTTATCTCTCGAGTCCACTTAAATCAACAAATTAAAAAGTAAAGAACGAATTGCCAAAAATAACGACATAACATGCTTCAATACATCACAAGAAAGTCATAACAAGTAATTCAAATCCTAACTACTATGTTTAGCTACTCTAAATCACAAGAAAAACAAACTAAACAAGTAGAAAACGTCTTAGAACGCTATTACAAATTGAAAGAAAGAGAAATAAACTTAGGTATCGATGCCGGTCCTTCGTCTCCGAGCTCCCGTCTTTGATCTCGAACCTCCACGAATGCTTTGGCTCCCAAAATCACTATTTTCTCTCTTCTTACAAGGTGTATTTCGAATTTAGGGCAAAACTCTACCAAATTGTGCTCCCCTTGCAATGAAATCATAAGGATATATTTATAGATATCAATGGGGCAGCGTTGCAACGCTAGGGACAGCGTTGCAACGCTGTACCCTAAACGCGTGGTAAATATGGAAACTATCGGCAGCGTTGCAACGCTAGGGACAGCGTTGCAACGCTGCTACCTCAACGCGCGCTCCTTATCGAAGTAGCGTTGCGACGCTGCAAGGCAGCGTTGCAACGCTACCTGCACGGTCTTCATAAGCGTCTTCTTATCGAGATGGCGTTACAACGCCAGAAGGCAGCGTTGCAACGCCATCGCCTGTAGCCTTCAAAGCCTCTTGGCTGCGCGTTCGGCGTTGCAACGCTCTATATGGCGTTGCAACGCCATCACCTCGGGTCTTAAAGCTTGGTTTGGTTTTCTCTCTTCCATTTGATGTTATATTTAGCTCCAAATAGCCTTGTTTTGATCCCGAGTGATCCAAATTGTCTCCAATAGCTCCGTTTAAGCTCTTAACCTGAAATTGAATAAATTAACCACGTAAAAGCCCTGAAATCATCATAAAACTAGCAATAATTAAGCCTAAGGATAGCACACTTTGTGTGCTATCACTTGCTTTTGTTGGACTGGAGTCCTTTTTTGTAGCTAGTTCTTGGACTCCCTTTTTGTTGGGTTTGTATTTAGTATGCCCTTGTTTCTTTCATCTTTCTCAATGAAAGTTTGGTTTCTTACCAGATTTTTTTTCTATGATATTTGGTATAGGTTAAATCTGTCTAAAATGAAAAAAAGAACTATGGTGTAAAATTGATAATTGTGTACTCTTTAATTTCTTAAATTATTACATGCGAGCTTTGTGTATGTTTCTTTGTTGACCTGTATTGACAACGATGATTTGGTTTAACAGTCAGAGGACAAGATGTAATCCTTAGCGTCATGGTCATGTATAGTAATGATAGAATATAGAAAGAGGGAAATTTTGGTCAAATAAATTTTGAAAACACTCCAATTGGCACACAGATGATGGCAGGAGAATATTTTACAAACGAAATTGTCAATTTTATAAAAAAAATTGTCAAATTTATTAGAAAACTTGAAAGGATGCAAAATTCCCCCAAAGAAAGTTTTTATCAAGATTATTCTAACATATGGACCGTTTTTCACGTGAAGAATAGTTATTAGTGTTGTGGTACCAAGCTTAAGTGGCTATCAATTTTAATTTATTTGGTTCGTGCATCTCATGCTATTATGGTACTTTCTTCTGTCATCCTGTCTTAGACATTCTTCTTAGAATTTTGATGCTTATTTATTTTCGTCTTTTCCTTCCCACAATGCCAAATGTATCCAAAGTCTACAATGGAGTGTAAATCAGGTTCAGGGGAGGGGAGTCTTTTTGTGGTGAGCTGGTGTGTGTGCTATTCTTTGGGAGCTTTGGGGGAGAGAAATAATAGAATCTTTTGAGGGGTTGATCGTTCCTCTTCTGATATTTGGACCCTTAGTAGATTCTATGTTTCTCTTTGGGCCTCGGTGGTCGAGCCTTTTTGTAATTATCCTTTAGATTTTATTCTGCTTGGGTGGAGCACCTTGTTGTAAGCTCCCCTTGTTTTTTGTGGGCTTGTTTTTGTATGCCCCTGTATTCTTTCATTTTTTCTCAATGAAAGCTTGATTTTTCATTAAAAAAAAAAAAAAAAAACAATGGAGTGTAAATCAAAGTTATGTTACTCGTGAATATGACATTGGTGGAAGTGCCTGTTGACTCATCCTGTCTTAGAAGTTTGATAATCTAAGCAACTTTTGCTTTGTCCACGCAGGCTTTTATGAGACTAGGATTGCTTATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCTATTCCCGATTACTAGGTGTTCCTATCTCGATGGTGTATGCTTATCTCATCTCTCTTTCAATGTAAAACTATCATATAAAGTCAGAGAATGGTTTGTACAAAATCACGCCTCTTGAGTTTGTAATATATTCATATTTTATTCTTGTTCATAGCTGGTTAGAAAAACGATAAATTATGTAGCTCTAATTTATTAACTCGATAAGTCTTGTAGCTAAAACTCAAACTTTAGCCTGCAAATGCTTCGAGTGAGATTATTACATGACTAACTGCATGGAGCAAGGTTGTTTAGGTAGGATTTGAACTTTTTATGGATTACATTGTGCAGAAGAGAACATTAAGACCAGACCTAGATTGTTTCATACCGAAGCACTAGACAAATCTTAAGTTGCAGCTGATGCTTTTGTGAATGCTTTTCAAAAAGTCAGATGCAGATTGAAGAATTGTTTTAGCACATTGTAATTTTTGTTACAAATGGACGAATTAAAAAGATTTGTCCACTTTGTCTTTAAATGTCTTGATGGGATCCCTATAATCCCACAACCTTATATTACAACATTTAATCATTTTGTTTTCTAGGAAGCTGTTGAATGCTGGACGGGGAAGCCCAAGCAAACTAGAAAGAAAAAAAAAAAAACCCTCTTCTGTGCGAATTAAATTCTTTTTGTAACAAGAGAGAGAGTAGGCTATGTTTGGTATATGTGTATATTCTTTGCTTATGCAAGAAGGGGACAATTAT

mRNA sequence

CTGGAATCTTTTGAATTGTCTGTTCTCTGGTTATATGGAAGGTGGCTTGATTTAGTTGAAATTTGAAGACTCCATTCTTGATAATCGCTGTCATGGCATCTAGACGGAATGTTCGTTACAGTTCCCTTGCCACTGATGATAACGATCTTGATTATGATGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAAATTCCGTGGAAGTCTATTGCTCTGGCTATCTTCTTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCTTATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCTATTCCCGATTACTAGGTGTTCCTATCTCGATGGTGTATGCTTATCTCATCTCTCTTTCAATGTAAAACTATCATATAAAGTCAGAGAATGGTTTGTACAAAATCACGCCTCTTGAGTTTGTAATATATTCATATTTTATTCTTGTTCATAGCTGGTTAGAAAAACGATAAATTATGTAGCTCTAATTTATTAACTCGATAAGTCTTGTAGCTAAAACTCAAACTTTAGCCTGCAAATGCTTCGAGTGAGATTATTACATGACTAACTGCATGGAGCAAGGTTGTTTAGGTAGGATTTGAACTTTTTATGGATTACATTGTGCAGAAGAGAACATTAAGACCAGACCTAGATTGTTTCATACCGAAGCACTAGACAAATCTTAAGTTGCAGCTGATGCTTTTGTGAATGCTTTTCAAAAAGTCAGATGCAGATTGAAGAATTGTTTTAGCACATTGTAATTTTTGTTACAAATGGACGAATTAAAAAGATTTGTCCACTTTGTCTTTAAATGTCTTGATGGGATCCCTATAATCCCACAACCTTATATTACAACATTTAATCATTTTGTTTTCTAGGAAGCTGTTGAATGCTGGACGGGGAAGCCCAAGCAAACTAGAAAGAAAAAAAAAAAAACCCTCTTCTGTGCGAATTAAATTCTTTTTGTAACAAGAGAGAGAGTAGGCTATGTTTGGTATATGTGTATATTCTTTGCTTATGCAAGAAGGGGACAATTAT

Coding sequence (CDS)

ATGGCATCTAGACGGAATGTTCGTTACAGTTCCCTTGCCACTGATGATAACGATCTTGATTATGATGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAAATTCCGTGGAAGTCTATTGCTCTGGCTATCTTCTTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCAGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCTTATTATGCATGGAGGGGTGCTAATGGATATCGCTTCGCTTCTATTCCCGATTACTAG

Protein sequence

MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY

Homology

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BLAST of Tan0014039 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-14
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS LA TDD  +D    +  P          KIP+K+IALA+ L ++G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Tan0014039 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.9e-14
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 7   VRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVL 66
           V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L
Sbjct: 17  VKYSRLSSTDD------GYIDLQFKKTP---PKIPYKAIALATVLFLIGAFLIIIGSLLL 76

Query: 67  TGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           +G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  SGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Tan0014039 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.9e-14
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS LA TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Tan0014039 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 7   VRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVL 66
           V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L
Sbjct: 17  VKYSRLSSTDD------GYIDLQFKKTP---PKIPYKAIALATGLFLIGAFLIIIGSLLL 76

Query: 67  TGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           +G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  SGYISKGGADRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Tan0014039 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSL-ATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L +TDD  +D    +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of Tan0014039 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 1.7e-57
Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. NCBI nr
Match: XP_022990725.1 (transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022990727.1 transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 5.4e-56
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of Tan0014039 vs. NCBI nr
Match: XP_022939930.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembrane protein 230-like [Cucurbita moschata] >XP_022993688.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993689.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022993690.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023549544.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023549545.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6578563.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.9 bits (577), Expect = 9.2e-56
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 109/116 (93.97%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+D +GS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. ExPASy TrEMBL
Match: A0A6J1JQW3 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-56
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSLA DDNDLDY+GSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGY FASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of Tan0014039 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. ExPASy TrEMBL
Match: A0A6J1FP54 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL+TDDNDLD DG+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.9e-56
Identity = 109/116 (93.97%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDYDGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+D +GS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of Tan0014039 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 164.1 bits (414), Expect = 6.8e-41
Identity = 79/121 (65.29%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDY-----DGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLG 60
           MASRR+VRY+ L  D++D  Y     +   +DPRF Y+PKAFD++PWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPD 117
            LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYETRIAYY+WRGA GYRFA+IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

[Close]

BLAST of Tan0014039 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

[Close]

BLAST of Tan0014039 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 41  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEIALAVALLVFGTLGIVSGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

The following BLAST results are available for this feature:

BLAST of Tan0014039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	4.0e-14	41.07	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	6.9e-14	41.44	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q8CIB6	6.9e-14	41.96	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q5R8X3	1.2e-13	41.44	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q5BJP5	1.5e-13	41.07	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]

BLAST of Tan0014039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521905.1	1.7e-57	97.41	transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran...	[more]
XP_022961740.1	4.9e-57	96.55	transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran...	[more]
XP_022990725.1	5.4e-56	95.69	transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane ...	[more]
XP_022939930.1	9.2e-56	94.83	transmembrane protein 230-like [Cucurbita moschata] >XP_022939931.1 transmembran...	[more]
XP_008459349.1	2.0e-55	93.97	PREDICTED: transmembrane protein 230 [Cucumis melo]	[more]

BLAST of Tan0014039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAY7	2.4e-57	96.55	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=...	[more]
A0A6J1JQW3	2.6e-56	95.69	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1	[more]
A0A6J1K312	4.4e-56	94.83	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1	[more]
A0A6J1FP54	4.4e-56	94.83	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111445649 PE=3 SV=...	[more]
A0A1S3C9X7	9.9e-56	93.97	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1	[more]

BLAST of Tan0014039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29170.1	6.8e-41	65.29	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	8.7e-12	43.24	Eukaryotic protein of unknown function (DUF872)	[more]
AT4G29850.1	1.5e-11	43.24	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 40..116 e-value: 1.3E-25 score: 89.8
None	No IPR available	PANTHER	PTHR15664:SF0	TRANSMEMBRANE PROTEIN 230	coord: 1..116
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014039.1	Tan0014039.1	mRNA
Tan0014039.2	Tan0014039.2	mRNA
Tan0014039.3	Tan0014039.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane