Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGTGGATGGCTCGGGTGACATGGGAGGACTTGGGACAGTGGTCAGTGGGAGGACGGTGGTAGTGGTAGAGGGCTCGGTGGCGGATGGTGGGAGGACGGTGGTAGTGGTGGAGGGATCAGTGGCAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCGGATTGTGGGAGGACGGTGGAAGTGGTGGAGGGATCAGTGGAAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAAATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAGATGGTGGGAGGACGGTGGGAGTAGTGGAGGGATCAGTGGCGGATTGTGGAGGACGGTGGGAGTGGTGGAGGGATCAATGGCGGATTGTGGGAGGACGGTGGGAGTGGTGAAGGGATCAGTGAGAGTGGGGGTTAGGTCATGTATGGGAGTGGTGACATCAGTGGCTTTATCCACTTCCATATTGTAA
mRNA sequence
ATGGAAGTAGTGGATGGCTCGGGTGACATGGGAGGACTTGGGACAGTGGTCAGTGGGAGGACGGTGGTAGTGGTAGAGGGCTCGGTGGCGGATGGTGGGAGGACGGTGGTAGTGGTGGAGGGATCAGTGGCAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCGGATTGTGGGAGGACGGTGGAAGTGGTGGAGGGATCAGTGGAAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAAATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAGATGGTGGGAGGACGGTGGGAGTAGTGGAGGGATCAGTGGCGGATTGTGGAGGACGGTGGGAGTGGTCATGTATGGGAGTGGTGACATCAGTGGCTTTATCCACTTCCATATTGTAA
Coding sequence (CDS)
ATGGAAGTAGTGGATGGCTCGGGTGACATGGGAGGACTTGGGACAGTGGTCAGTGGGAGGACGGTGGTAGTGGTAGAGGGCTCGGTGGCGGATGGTGGGAGGACGGTGGTAGTGGTGGAGGGATCAGTGGCAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCGGATTGTGGGAGGACGGTGGAAGTGGTGGAGGGATCAGTGGAAGATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAAATGGTGGGAGGACGGTGGGAGTGGTGGAGGGATCGGTGGCAGATGGTGGGAGGACGGTGGGAGTAGTGGAGGGATCAGTGGCGGATTGTGGAGGACGGTGGGAGTGGTCATGTATGGGAGTGGTGACATCAGTGGCTTTATCCACTTCCATATTGTAA
Protein sequence
MEVVDGSGDMGGLGTVVSGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCGRTVEVVEGSVEDGGRTVGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADCGGRWEWSCMGVVTSVALSTSIL
Homology
BLAST of Tan0011000 vs. NCBI nr
Match:
CAD7265340.1 (unnamed protein product, partial [Timema shepardi])
HSP 1 Score: 69.7 bits (169), Expect = 2.2e-08
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 5 DGSGDMGG--LGTVVS-GRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCG 64
+GSG GG +G S G+ VV+ EG A GG+ VV+ EGS A GG+ V + EGS A G
Sbjct: 1150 EGSGASGGKFVGLEASGGKFVVLFEGLEASGGKCVVLFEGSEASGGKFVVLFEGSEASGG 1209
Query: 65 RTVEVVEGSVEDGGRTVGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADCG 118
+ V + EGS GG+ V + EGS A+GG+ V + EGS A GG+ V + EGS A G
Sbjct: 1210 KFVVLFEGSEASGGKFVVLFEGSEASGGKFVVLFEGSEASGGKFVVLFEGSEASGG 1265
BLAST of Tan0011000 vs. NCBI nr
Match:
AAF97429.1 (VsaE2, partial [Mycoplasmopsis pulmonis])
HSP 1 Score: 62.0 bits (149), Expect = 4.6e-06
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query: 18 SGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCGRTVEVVEGSVEDGGRT 77
SG+T EGS ++ G+T EGS ++ G+T G EGS ++ G+T EGS + G+T
Sbjct: 24 SGKTKGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSGKT 83
Query: 78 VGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADCG 118
G EGS +N G+T G EGS ++ G+T G EGS ++ G
Sbjct: 84 QGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSG 123
BLAST of Tan0011000 vs. NCBI nr
Match:
XP_012905976.1 (PREDICTED: diffuse panbronchiolitis critical region protein 1 [Mustela putorius furo])
HSP 1 Score: 61.6 bits (148), Expect = 6.1e-06
Identity = 43/111 (38.74%), Postives = 57/111 (51.35%), Query Frame = 0
Query: 15 TVVSGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGS-------VADCGRTVEVV 74
T+ SG+T +GS D G+T E S D G+T GV++GS G+T +
Sbjct: 605 TLASGKTTRAPQGSTEDAGKTTGAPERSTEDAGKTTGVLKGSNNSGQETTLANGKTTRAL 664
Query: 75 EGSVEDGGRTVGVVEGS------VANGGRTVGVVEGSVADGGRTVGVVEGS 113
EGS ED G+T G +EGS G+T EGS D G+T G +EGS
Sbjct: 665 EGSTEDAGKTTGAIEGSKDHVGTTLASGKTTRAPEGSTEDAGKTTGALEGS 715
BLAST of Tan0011000 vs. NCBI nr
Match:
XP_019665102.2 (mucin-like protein 3 [Ailuropoda melanoleuca])
HSP 1 Score: 58.2 bits (139), Expect = 6.7e-05
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 0
Query: 11 GGLGTVVSGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCGRTVEVVEGS 70
G T+ + RT EGS GG+T EGS GG+T G E S G+T +EGS
Sbjct: 75 GQNSTLSNRRTTRAPEGSKDHGGKTTGAPEGSKDHGGKTTGAPEVSKDHGGKTTGALEGS 134
Query: 71 VEDGGRTVGVVEGSVANG-------GRTVGVVEGSVADGGRTVGVVEGS 113
++GG+T GV+EGS +G G+ G EGS GG T G +EGS
Sbjct: 135 KDNGGKTTGVLEGSKDHGEKTTLANGKITGAPEGSKDHGGMTTGALEGS 183
BLAST of Tan0011000 vs. NCBI nr
Match:
MBN8722465.1 (hypothetical protein [Acidobacteria bacterium])
HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 0
Query: 4 VDGS-GDMGGLGTVVSGRTVVV------VEGSVADGGRTVVVVEGSVADGGRTVGVVEGS 63
VDG+ D+G L T V G + V+G++AD G+ V+G++AD G+ V+G+
Sbjct: 35 VDGAIADIGKLETKVDGAIADIGKLETKVDGAIADIGKLEAKVDGAIADIGKLEAKVDGA 94
Query: 64 VADCGRTVEVVEGSVEDGGRTVGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADC 118
+AD G+ V+G++ D G+ V+G++A+ G+ V+G++AD G+ V+G++AD
Sbjct: 95 IADIGKLETKVDGAIADIGKLEAKVDGAIADIGKLEAKVDGAIADIGKLETKVDGAIADI 154
BLAST of Tan0011000 vs. ExPASy TrEMBL
Match:
A0A7R9B475 (Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS9381 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 5 DGSGDMGG--LGTVVS-GRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCG 64
+GSG GG +G S G+ VV+ EG A GG+ VV+ EGS A GG+ V + EGS A G
Sbjct: 1150 EGSGASGGKFVGLEASGGKFVVLFEGLEASGGKCVVLFEGSEASGGKFVVLFEGSEASGG 1209
Query: 65 RTVEVVEGSVEDGGRTVGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADCG 118
+ V + EGS GG+ V + EGS A+GG+ V + EGS A GG+ V + EGS A G
Sbjct: 1210 KFVVLFEGSEASGGKFVVLFEGSEASGGKFVVLFEGSEASGGKFVVLFEGSEASGG 1265
BLAST of Tan0011000 vs. ExPASy TrEMBL
Match:
M3YJN4 (Uncharacterized protein OS=Mustela putorius furo OX=9669 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07
Identity = 45/116 (38.79%), Postives = 59/116 (50.86%), Query Frame = 0
Query: 15 TVVSGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGS-------VADCGRTVEVV 74
T+ SG+T +GS D G+T E S D G+T GV++GS G+T +
Sbjct: 483 TLASGKTTRAPQGSTEDAGKTTGAPERSTEDAGKTTGVLKGSNNSGQETTLANGKTTRAL 542
Query: 75 EGSVEDGGRTVGVVEGS------VANGGRTVGVVEGSVADGGRTVGVVEGSVADCG 118
EGS ED G+T G +EGS G+T EGS D G+T G +EGS D G
Sbjct: 543 EGSTEDAGKTTGAIEGSKDHVGTTLASGKTTRAPEGSTEDAGKTTGALEGSTEDAG 598
BLAST of Tan0011000 vs. ExPASy TrEMBL
Match:
Q9FCT4 (VsaE2 (Fragment) OS=Mycoplasma pulmonis OX=2107 GN=vsaE2 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query: 18 SGRTVVVVEGSVADGGRTVVVVEGSVADGGRTVGVVEGSVADCGRTVEVVEGSVEDGGRT 77
SG+T EGS ++ G+T EGS ++ G+T G EGS ++ G+T EGS + G+T
Sbjct: 24 SGKTKGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSGKT 83
Query: 78 VGVVEGSVANGGRTVGVVEGSVADGGRTVGVVEGSVADCG 118
G EGS +N G+T G EGS ++ G+T G EGS ++ G
Sbjct: 84 QGQAEGSGSNSGKTQGQAEGSGSNSGKTQGQAEGSGSNSG 123
BLAST of Tan0011000 vs. ExPASy TrEMBL
Match:
A0A2U3WJV3 (diffuse panbronchiolitis critical region protein 1 OS=Odobenus rosmarus divergens OX=9708 GN=DPCR1 PE=4 SV=1)
HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 0
Query: 5 DGSGDMGGLGTVVSGRTVVVVEGSVADG-------GRTVVVVEGSVADGGRTVGVVEGS- 64
+GS D G T+ +G+T+ EG G G+T EGS GG+T G +EGS
Sbjct: 265 EGSKDHGEKTTLANGKTIRASEGPKDHGEKTTLANGKTTRAPEGSKDHGGKTTGALEGSK 324
Query: 65 ------VADCGRTVEVVEGSVEDGGRTVGVVEGSVANGGRTVGVVEGSVADGGRT 106
G+T EGS + GG+T G +EGS +GG+T G +EGS G +T
Sbjct: 325 DHGEKTTLASGKTTRAPEGSKDHGGKTTGALEGSKDHGGKTTGALEGSKDHGAKT 379
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7R9B475 | 1.1e-08 | 47.41 | Hypothetical protein OS=Timema shepardi OX=629360 GN=TSIB3V08_LOCUS9381 PE=4 SV=... | [more] |
M3YJN4 | 2.7e-07 | 38.79 | Uncharacterized protein OS=Mustela putorius furo OX=9669 PE=4 SV=1 | [more] |
Q9FCT4 | 2.2e-06 | 42.00 | VsaE2 (Fragment) OS=Mycoplasma pulmonis OX=2107 GN=vsaE2 PE=4 SV=1 | [more] |
A0A2U3WJV3 | 1.6e-04 | 37.39 | diffuse panbronchiolitis critical region protein 1 OS=Odobenus rosmarus divergen... | [more] |
Match Name | E-value | Identity | Description | |