Tan0010921 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGAGCAAAAGCGGCAAAACAAAAACCCCTGAACCCACCGTCGTCTTCCTCGTAGCAAAATGGCGTCAGGTCTTAGCAATGGAACCAAGTTATTCAGAGCTTGCAGAACCCTCTTGGATTCACTCAAATCCCCCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCCCAAGGGAAAGCTAAAAGCTTCAACTTCCGGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGTCAATCGTTCGTCGGGGATTTTTAAGTCCGTCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGCCCCAGACTTCGCGTTCCGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATAACCTCCAGGTTCATTTCATTTCTCTATTGTTTTTCCTGATATGACCTAATTTTTCTTTTGCGTATCGTTGTTCTAGTTCCTTGTTTCCTGCAGTGTGTTCGTTTGTCTCGTGAATGGAATGCCTTGAGAGTTAATTTTAACTTAGCTTAGAGCTTGAAGTTTTGGGTGTAGTGTTGATTTCGTAGAGTTTCTTCCTTTTAGTTCTCAGTTGCTGAATCTAAGGTCTCTGAAATGGAAGTTCTGAATTTGAAAATTAGGTTAAATCATAGGTGGCATCCCACATTGAAAAAGTTGAGTGAAACACTCACAATATATAAGATATATGGACTCTCCTCCCCTTGCCAATTGATTTTGAGATGAAATCCCATGTAATCTAATATAGTATCAGAGCCCATTAAGCCCATATGGGCATTCGGTCGGCATTCGGTAAAAAAAAAAATAATGGTAAACCAAAAAACGCACCATCGTGAGAGGGCATGTTGAGACATTGGAACAGTGGAGAGAAACCTCACAATATATAAGATATATGGCTACTACTCCCATTACCAATTGGTGTTGAGATGAAACTCCATATAATCTAATAAACTCTACTCTTTTATAGTTCACGAATTAAATAATCCTAAAACTATAAGGGTTAAATTTATAATTTATAAGATGAACATGGAGCATCTTTTCCCTCTGTAAGGTGCAATTTTGAACCTTCCACGTTTTTTGTAATTCATTAAAAAGAACCATTTAACGTACTTCATTTTTTTTTCGTTTAGGGTATTGTAACAAATATATGCGTTTAGTCCAGAGGAATCAATCACGATGCTGTATTTATACCTCTTCTTAAGTTTCATTTGCCTTGAATAATCAACAAGCTATTTTGGCCATAAATGCATTTTTTGAACAAGGTAGTTTAAAGGATTGAATGCTACTGTGAGCTTTTTCTTTTCACATGGATTTGGGTTTGTGCTCTGCTCCAAAAAAGTTAGCTACTACTCAGAGCTGGGAGCACCTACCCAAATCCCTGTCCAATACATTTGAGGGAAGCCCCCCGATGTCCGGTCCAATTTTTGGGTGTAAATACTTCAGTTGAAGTTCATGAAAGGCTAAACCAGGATTTTCTGCCTCTTGATCAAATGAAATGGGTATGTTTGCTATGAGTTTCTAAAGGGTGTGTGAGTATACACTGATTACTTCTCCCATCTTGCCCTAGAATGTGAATATTTAAGCCTTGTTTGATAACCATTTGGTTTTTTTTTTTTTTTTTTTTTTTTTAATTAGGTTTGTTTTTTCACAATTTCTTTTCATTTTCTCTACCATGATTTCCATCTTTCTTGACGTAAGACTTAAGTTCCTAACGAAATTTCAACAACAAAAACAAAATTTTGAAATCTACTTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTGAAAACATATGTACAAAGTAGATAAAACATAGAAACTCATTGGTAGAAGTTGTATTCTTAATTTTCAAAGACCAAAAACCAAATAGATATCACTTATTTATTTTTGTTTGAAACACCCTAGAAGTGAACTAATTTAGCCTGCCATTGCTCTTCAATTAACATTGTGGTTAAATGAGAATGAAAATGTTGGTAAATGTATCAATATAATGTTGCTACTATTTAAAAAAAAGTCTTGCAATGTACATAAACTCCTAAACATAGTTTAAAATAGTTACAAATTATCTTTATTAGTAGTTGTAATAGTAGTTGTCTGCCACACCAAACCAATTTAGTCAAAATTTATTTAATGGGGTATGTCATATTAGTATTCTATTAATGGTGTTAACAGTAGACATTGAATATTAGTATAATTTAACATTGAGAGGTATAGTCTTCAATATATATGAACTGAAATTATAATTTAACCTAGTATTACTTTTCTTTTTCTTTTTTGGTAAGGTTTTGCTGATATAACACTCTCACACACACACACACAATTTGGTGTGCAGAACCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGACTATATTTGATGGAAGAGAGAAAGTGGGGTTCTTAGAGATTGGAAAATTGCTATCCCCTCATTTTGTGAAGTCTAGTTAACCATCAAACTTCCAGTGCCATGCATCGACTTAGTTGTTCTAACAGTTCTCTCTCAACCTGTCTTCCAAATCCTTGATGATGTTTTGGCTAATCCTATGGCTTCAGTGTACTCTTTGGTTTGCCTCTGATTTAAGAAAAAAGAGGTATTTCTTACTCAGACATTGTTGTTGATTATGCTTTTAGCTTTTAAATGGTTTGTTACATTCAATGTTAGTCTCCTTGGAAGAACTAGAAGACAAGAAAAACCCACAAGAACTGGCTTGAACTGGGGATATCTGCTTTGCTGCTACCCTAAACATTTTGAAGATTAGGTGTTCTTTCTGTTTTCTTTTTATGTATGGCCTGTTTTTCTTTTTTTGTTTTTTACAACTGTTTTATAGAGCTGTTTAAAGAAAACTGTATGGCCATTCACTAGTTCACTTATTATATGTCTTTTCCCCCCTCTTTGCCTCTCCTGTACTTTATTTTCAAAACTGAAAAATGTTCTCTATAAGATTTTTTTTTAAGGAATGAATTATGTTAAATTAAATGGGGAGAACACTATGAAAGAAAGGAAGAAGAATGAGTGAAAAGTGATTGATAATTTGAC GTCGAGCAAAAGCGGCAAAACAAAAACCCCTGAACCCACCGTCGTCTTCCTCGTAGCAAAATGGCGTCAGGTCTTAGCAATGGAACCAAGTTATTCAGAGCTTGCAGAACCCTCTTGGATTCACTCAAATCCCCCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCCCAAGGGAAAGCTAAAAGCTTCAACTTCCGGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGTCAATCGTTCGTCGGGGATTTTTAAGTCCGTCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGCCCCAGACTTCGCGTTCCGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATAACCTCCAGAACCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGACTATATTTGATGGAAGAGAGAAAGTGGGGTTCTTAGAGATTGGAAAATTGCTATCCCCTCATTTTGTGAAGTCTAGTTAACCATCAAACTTCCAGTGCCATGCATCGACTTAGTTGTTCTAACAGTTCTCTCTCAACCTGTCTTCCAAATCCTTGATGATGTTTTGGCTAATCCTATGGCTTCAGTGTACTCTTTGGTTTGCCTCTGATTTAAGAAAAAAGAGGTATTTCTTACTCAGACATTGTTGTTGATTATGCTTTTAGCTTTTAAATGGTTTGTTACATTCAATGTTAGTCTCCTTGGAAGAACTAGAAGACAAGAAAAACCCACAAGAACTGGCTTGAACTGGGGATATCTGCTTTGCTGCTACCCTAAACATTTTGAAGATTAGGTGTTCTTTCTGTTTTCTTTTTATGTATGGCCTGTTTTTCTTTTTTTGTTTTTTACAACTGTTTTATAGAGCTGTTTAAAGAAAACTGTATGGCCATTCACTAGTTCACTTATTATATGTCTTTTCCCCCCTCTTTGCCTCTCCTGTACTTTATTTTCAAAACTGAAAAATGTTCTCTATAAGATTTTTTTTTAAGGAATGAATTATGTTAAATTAAATGGGGAGAACACTATGAAAGAAAGGAAGAAGAATGAGTGAAAAGTGATTGATAATTTGAC ATGGCGTCAGGTCTTAGCAATGGAACCAAGTTATTCAGAGCTTGCAGAACCCTCTTGGATTCACTCAAATCCCCCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCCCAAGGGAAAGCTAAAAGCTTCAACTTCCGGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGTCAATCGTTCGTCGGGGATTTTTAAGTCCGTCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGCCCCAGACTTCGCGTTCCGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATAACCTCCAGAACCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGACTATATTTGATGGAAGAGAGAAAGTGGGGTTCTTAGAGATTGGAAAATTGCTATCCCCTCATTTTGTGAAGTCTAGTTAA MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS Homology
BLAST of Tan0010921 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.5e-10 Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.7e-10 Identity = 37/104 (35.58%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy Swiss-Prot
Match: Q9P7S3 (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr3 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06 Identity = 24/68 (35.29%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy Swiss-Prot
Match: Q6STE5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 OS=Homo sapiens OX=9606 GN=SMARCD3 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.5e-05 Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0
BLAST of Tan0010921 vs. NCBI nr
Match: XP_023000110.1 (upstream activation factor subunit spp27-like [Cucurbita maxima]) HSP 1 Score: 231.9 bits (590), Expect = 3.5e-57 Identity = 123/146 (84.25%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Tan0010921 vs. NCBI nr
Match: KAG6593744.1 (hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231.9 bits (590), Expect = 3.5e-57 Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Tan0010921 vs. NCBI nr
Match: XP_023514456.1 (upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.1 bits (588), Expect = 6.0e-57 Identity = 123/146 (84.25%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Tan0010921 vs. NCBI nr
Match: XP_023000111.1 (upstream activation factor subunit spp27-like [Cucurbita maxima]) HSP 1 Score: 230.7 bits (587), Expect = 7.8e-57 Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Tan0010921 vs. NCBI nr
Match: KAG6593745.1 (hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229.6 bits (584), Expect = 1.7e-56 Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy TrEMBL
Match: A0A6J1KHF5 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111494404 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 123/146 (84.25%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy TrEMBL
Match: A0A6J1KEZ2 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111494406 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 3.8e-57 Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy TrEMBL
Match: A0A5D3DMJ2 (Protein TRI1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00610 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.9e-46 Identity = 101/145 (69.66%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy TrEMBL
Match: A0A1S3CBA0 (protein TRI1-like OS=Cucumis melo OX=3656 GN=LOC103499003 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.9e-46 Identity = 101/145 (69.66%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of Tan0010921 vs. ExPASy TrEMBL
Match: A0A0A0KCY9 (SWIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078570 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 4.5e-42 Identity = 98/145 (67.59%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Tan0010921 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 124.4 bits (311), Expect = 7.4e-29 Identity = 69/136 (50.74%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Tan0010921 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 5.5e-24 Identity = 63/135 (46.67%), Postives = 79/135 (58.52%), Query Frame = 0
BLAST of Tan0010921 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.7e-23 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of Tan0010921 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20 Identity = 55/124 (44.35%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of Tan0010921 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 57/142 (40.14%), Postives = 85/142 (59.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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