Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAATCTATACATAAAAATTTAAAAACATTAAAATATGAAACTTAAAAGGGGAAATTGGAGCCCCCACCAAGAAACAGCTCCGAATTCTTGTTCATTCCATCTTCTTCTTTTTCTTATTATTATTGTAATCTCACAGTGATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTCAACTTCTTCTCTCACATATTCTCTTTTCATTTTCTGTCATGTTTCTTCATCATCTTTTCTTTCTCACCTTCTTCTTCTTTCATACTCTTGTCTGCAACTGCATCAGTTTCTTTTACAACAAACAACTTTATAGAAGTAAATAATTGTACTAAGGGAATCTTATCCTCTCCCTCTACTAACCGTTGATACACGATCCAAGTCATTAATTTTGTTCTATTTGTTATTATCTTTATTCTTACCGAATCAATGTAGATAGTTGATAGGATGACTCTGTTTTTATGAATCATTCAATCCTAGAATGCTAGTGATTAGTACCTGATTATCAAGTTTGACGAAGAACAAATAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGGTAAATGAATCACTGTTCTTAACCTACAAAAAGTTCTGAAAAGAAATTTTGTGAGAGCTGTTGGATTGATACATGTTTTTTCTTTTTGTTTCATCTTTTGGCCACAATTAGAGAGACAGAGATTATTGATCTCCTACTAAAACAGAGTTGGATTCATCTAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGAAAAGGGTGTTGCTGTTAAAAAAGACTTGAACATTAATGGCTTCAACTCGTTCTACTAATCCAAATATGGTCTAACTCTTTCGGGTCATACTCAAACGTCGAATGTATGTACTTCCTATGTCGAATGTATACAGACATTGTTTTAATTCGAGTAGTTTTGAGTAAATGTACTTTCTTCTGTATCTGAATCACATAATCAAATTCACTGCTCAAAATTTCATAGTAATTTCCTCATGGTAGTGAAATTCAAACCCAAAATTGCATAGCTTACACCCTCCAATTCATAAACTTCTTGATCAATGGGGTAGTTCTATCATATTTCAAC
mRNA sequence
TTTTAATCTATACATAAAAATTTAAAAACATTAAAATATGAAACTTAAAAGGGGAAATTGGAGCCCCCACCAAGAAACAGCTCCGAATTCTTGTTCATTCCATCTTCTTCTTTTTCTTATTATTATTGTAATCTCACAGTGATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGAAAAGGGTGTTGCTGTTAAAAAAGACTTGAACATTAATGGCTTCAACTCGTTCTACTAATCCAAATATGGTCTAACTCTTTCGGGTCATACTCAAACGTCGAATGTATGTACTTCCTATGTCGAATGTATACAGACATTGTTTTAATTCGAGTAGTTTTGAGTAAATGTACTTTCTTCTGTATCTGAATCACATAATCAAATTCACTGCTCAAAATTTCATAGTAATTTCCTCATGGTAGTGAAATTCAAACCCAAAATTGCATAGCTTACACCCTCCAATTCATAAACTTCTTGATCAATGGGGTAGTTCTATCATATTTCAAC
Coding sequence (CDS)
ATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGA
Protein sequence
MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWRRSQAC
Homology
BLAST of Tan0008379 vs. NCBI nr
Match:
XP_031744837.1 (uncharacterized protein LOC101211901 isoform X2 [Cucumis sativus])
HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39
Identity = 88/111 (79.28%), Postives = 103/111 (92.79%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALTSSSSSSSSSLNFSLLK+G+SVS KP++RIWM+KP++ PL K+ F L+IRSS+KNKV
Sbjct: 1 MALTSSSSSSSSSLNFSLLKTGLSVSFKPITRIWMVKPTRLPL-KNSFSLRIRSSMKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWRRSQAC 112
FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGN+QR+R W R++ C
Sbjct: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNNQRERCWGRAEPC 110
BLAST of Tan0008379 vs. NCBI nr
Match:
XP_008462240.1 (PREDICTED: uncharacterized protein LOC103500644 [Cucumis melo])
HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 87/102 (85.29%), Postives = 96/102 (94.12%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALTSSSSSSSS LNFS LK+G+SVS KP++RIWMLKP++FPL SL PL+IRSSIKNKV
Sbjct: 1 MALTSSSSSSSSPLNFSHLKTGLSVSFKPVTRIWMLKPTRFPLKNSL-PLRIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRK 103
FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGNHQR+
Sbjct: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNHQRE 101
BLAST of Tan0008379 vs. NCBI nr
Match:
XP_022149736.1 (uncharacterized protein LOC111018083 isoform X2 [Momordica charantia])
HSP 1 Score: 164.5 bits (415), Expect = 5.3e-37
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0
Query: 1 MALT-SSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSK-FPLNKSLFPLQIRSSIKN 60
MALT SSSSSSSSS N LLKSG +S+KP+SR+WML+P+K FPL KSL PLQIRSSIKN
Sbjct: 1 MALTSSSSSSSSSSFNVCLLKSG--LSIKPMSRVWMLRPTKFFPLKKSL-PLQIRSSIKN 60
Query: 61 KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
KVFEDQSEGVICYADENGEIICEGYDEGPRFHQN SEK NHQRKRWWR
Sbjct: 61 KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNPSEKANHQRKRWWR 105
BLAST of Tan0008379 vs. NCBI nr
Match:
XP_023548904.1 (uncharacterized protein LOC111807416 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 164.1 bits (414), Expect = 7.0e-37
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALT SSSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1 MALT-CCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPAKFPLKKSL-PLQIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
FEDQSEGVICY DENGEI+CEGYDEGPRFH NL EKGNHQRKRW R
Sbjct: 61 FEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQRKRWRR 104
BLAST of Tan0008379 vs. NCBI nr
Match:
XP_022953823.1 (uncharacterized protein LOC111456239 isoform X2 [Cucurbita moschata])
HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 87/106 (82.08%), Postives = 91/106 (85.85%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALT SSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1 MALT-CCCCCSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSL-PLQIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
FEDQSEGVICY DENGEI+CEGYDEGPRFH NL EKGNHQRKRW R
Sbjct: 61 FEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQRKRWRR 104
BLAST of Tan0008379 vs. ExPASy TrEMBL
Match:
A0A1S3CGF5 (uncharacterized protein LOC103500644 OS=Cucumis melo OX=3656 GN=LOC103500644 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38
Identity = 87/102 (85.29%), Postives = 96/102 (94.12%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALTSSSSSSSS LNFS LK+G+SVS KP++RIWMLKP++FPL SL PL+IRSSIKNKV
Sbjct: 1 MALTSSSSSSSSPLNFSHLKTGLSVSFKPVTRIWMLKPTRFPLKNSL-PLRIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRK 103
FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGNHQR+
Sbjct: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNHQRE 101
BLAST of Tan0008379 vs. ExPASy TrEMBL
Match:
A0A6J1D9A7 (uncharacterized protein LOC111018083 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018083 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 2.6e-37
Identity = 91/108 (84.26%), Postives = 97/108 (89.81%), Query Frame = 0
Query: 1 MALT-SSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSK-FPLNKSLFPLQIRSSIKN 60
MALT SSSSSSSSS N LLKSG +S+KP+SR+WML+P+K FPL KSL PLQIRSSIKN
Sbjct: 1 MALTSSSSSSSSSSFNVCLLKSG--LSIKPMSRVWMLRPTKFFPLKKSL-PLQIRSSIKN 60
Query: 61 KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
KVFEDQSEGVICYADENGEIICEGYDEGPRFHQN SEK NHQRKRWWR
Sbjct: 61 KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNPSEKANHQRKRWWR 105
BLAST of Tan0008379 vs. ExPASy TrEMBL
Match:
A0A6J1GPD7 (uncharacterized protein LOC111456239 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456239 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 87/106 (82.08%), Postives = 91/106 (85.85%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALT SSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1 MALT-CCCCCSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSL-PLQIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
FEDQSEGVICY DENGEI+CEGYDEGPRFH NL EKGNHQRKRW R
Sbjct: 61 FEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQRKRWRR 104
BLAST of Tan0008379 vs. ExPASy TrEMBL
Match:
A0A6J1JXJ2 (uncharacterized protein LOC111488739 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488739 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36
Identity = 86/106 (81.13%), Postives = 90/106 (84.91%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALT SSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1 MALT----CCSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSL-PLQIRSSIKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRKRWWR 107
FEDQSEGVICY DENGEI+CEGYDEGPRF NL EKGNHQRKRW R
Sbjct: 61 FEDQSEGVICYTDENGEIVCEGYDEGPRFQPNLPEKGNHQRKRWRR 101
BLAST of Tan0008379 vs. ExPASy TrEMBL
Match:
A0A0A0K9A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448010 PE=4 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 82/102 (80.39%), Postives = 95/102 (93.14%), Query Frame = 0
Query: 1 MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
MALT SSSSSSSLNFSLLK+G+SVS KP++RIWM+KP++ PL K+ F L+IRSS+KNKV
Sbjct: 1 MALT--SSSSSSSLNFSLLKTGLSVSFKPITRIWMVKPTRLPL-KNSFSLRIRSSMKNKV 60
Query: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRK 103
FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGN+QR+
Sbjct: 61 FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNNQRE 99
BLAST of Tan0008379 vs. TAIR 10
Match:
AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query: 49 PLQIRSSIKNKVFEDQSEGVICYADENGEIICEGYDEGPR 89
P IR S KN VFED +G+ICY D+NGE+ICEGYDEGPR
Sbjct: 45 PQPIRYSTKNIVFEDPIQGIICYTDDNGEVICEGYDEGPR 84
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_031744837.1 | 3.3e-39 | 79.28 | uncharacterized protein LOC101211901 isoform X2 [Cucumis sativus] | [more] |
| XP_008462240.1 | 1.1e-37 | 85.29 | PREDICTED: uncharacterized protein LOC103500644 [Cucumis melo] | [more] |
| XP_022149736.1 | 5.3e-37 | 84.26 | uncharacterized protein LOC111018083 isoform X2 [Momordica charantia] | [more] |
| XP_023548904.1 | 7.0e-37 | 83.02 | uncharacterized protein LOC111807416 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022953823.1 | 2.7e-36 | 82.08 | uncharacterized protein LOC111456239 isoform X2 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3CGF5 | 5.2e-38 | 85.29 | uncharacterized protein LOC103500644 OS=Cucumis melo OX=3656 GN=LOC103500644 PE=... | [more] |
| A0A6J1D9A7 | 2.6e-37 | 84.26 | uncharacterized protein LOC111018083 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
| A0A6J1GPD7 | 1.3e-36 | 82.08 | uncharacterized protein LOC111456239 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1JXJ2 | 2.9e-36 | 81.13 | uncharacterized protein LOC111488739 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A0A0K9A8 | 1.6e-34 | 80.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448010 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G14280.1 | 2.4e-11 | 70.00 | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bac... | [more] |
