Tan0008379.2 (mRNA) Snake gourd v1

Overview


Name	Tan0008379.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG06: 766975 .. 768285 (+)
Sequence length	851
RNA-Seq Expression	Tan0008379.2
Synteny	Tan0008379.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATCTATACATAAAAATTTAAAAACATTAAAATATGAAACTTAAAAGGGGAAATTGGAGCCCCCACCAAGAAACAGCTCCGAATTCTTGTTCATTCCATCTTCTTCTTTTTCTTATTATTATTGTAATCTCACAGTGATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTCAACTTCTTCTCTCACATATTCTCTTTTCATTTTCTGTCATGTTTCTTCATCATCTTTTCTTTCTCACCTTCTTCTTCTTTCATACTCTTGTCTGCAACTGCATCAGTTTCTTTTACAACAAACAACTTTATAGAAGTAAATAATTGTACTAAGGGAATCTTATCCTCTCCCTCTACTAACCGTTGATACACGATCCAAGTCATTAATTTTGTTCTATTTGTTATTATCTTTATTCTTACCGAATCAATGTAGATAGTTGATAGGATGACTCTGTTTTTATGAATCATTCAATCCTAGAATGCTAGTGATTAGTACCTGATTATCAAGTTTGACGAAGAACAAATAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGGTAAATGAATCACTGTTCTTAACCTACAAAAAGTTCTGAAAAGAAATTTTGTGAGAGCTGTTGGATTGATACATGTTTTTTCTTTTTGTTTCATCTTTTGGCCACAATTAGAGAGACAGAGATTATTGATCTCCTACTAAAACAGAGTTGGATTCATCTAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGAAAAGGGTGTTGCTGTTAAAAAAGACTTGAACATTAATGGCTTCAACTCGTTCTACTAATCCAAATATGGTCTAACTCTTTCGGGTCATACTCAAACGTCGAATGTATGTACTTCCTATGTCGAATGTATACAGACATTGTTTTAATTCGAGTAGTTTTGAGTAAATGTACTTTCTTCTGTATCTGAATCACATAATCAAATTCACTGCTCAAAATTTCATAGTAATTTCCTCATGGTAGTGAAATTCAAACCCAAAATTGCATAGCTTACACCCTCCAATTCATAAACTTCTTGATCAATGGGGTAGTTCTATCATATTTCAAC

mRNA sequence

TTTTAATCTATACATAAAAATTTAAAAACATTAAAATATGAAACTTAAAAGGGGAAATTGGAGCCCCCACCAAGAAACAGCTCCGAATTCTTGTTCATTCCATCTTCTTCTTTTTCTTATTATTATTGTAATCTCACAGTGATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGAGAGACAGAGATTATTGATCTCCTACTAAAACAGAGTTGGATTCATCTAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGAAAAGGGTGTTGCTGTTAAAAAAGACTTGAACATTAATGGCTTCAACTCGTTCTACTAATCCAAATATGGTCTAACTCTTTCGGGTCATACTCAAACGTCGAATGTATGTACTTCCTATGTCGAATGTATACAGACATTGTTTTAATTCGAGTAGTTTTGAGTAAATGTACTTTCTTCTGTATCTGAATCACATAATCAAATTCACTGCTCAAAATTTCATAGTAATTTCCTCATGGTAGTGAAATTCAAACCCAAAATTGCATAGCTTACACCCTCCAATTCATAAACTTCTTGATCAATGGGGTAGTTCTATCATATTTCAAC

Coding sequence (CDS)

ATGGCACTGACTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCAATTTTTCTCTTTTGAAATCTGGTGTTTCAGTTTCAGTTAAGCCTTTAAGCAGAATTTGGATGCTCAAACCTTCAAAGTTTCCTCTCAACAAGTCTCTTTTCCCACTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACGCAGACGAGAACGGGGAGATCATCTGCGAAGGATACGATGAGGGTCCTCGCTTTCACCAAAACCTTTCCGAAAAAGGCAACCATCAAAGAGAGACAGAGATTATTGATCTCCTACTAAAACAGAGTTGGATTCATCTAGGAAAAGGTGGTGGAGGAGATCTCAGGCATGCTGAAAAGGGTGTTGCTGTTAAAAAAGACTTGAACATTAATGGCTTCAACTCGTTCTACTAA

Protein sequence

MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKGGGGDLRHAEKGVAVKKDLNINGFNSFY

Homology

[Close]

BLAST of Tan0008379.2 vs. NCBI nr
Match: XP_008462240.1 (PREDICTED: uncharacterized protein LOC103500644 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALTSSSSSSSS LNFS LK+G+SVS KP++RIWMLKP++FPL  SL PL+IRSSIKNKV
Sbjct: 1   MALTSSSSSSSSPLNFSHLKTGLSVSFKPVTRIWMLKPTRFPLKNSL-PLRIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGNHQRETEIIDLLLKQSWI LGKG
Sbjct: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNHQRETEIIDLLLKQSWIQLGKG 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
            GG+  HAEKGVAV+KDLNINGFNSF
Sbjct: 121 VGGERSHAEKGVAVRKDLNINGFNSF 145

[Close]

BLAST of Tan0008379.2 vs. NCBI nr
Match: XP_004141732.2 (uncharacterized protein LOC101211901 isoform X1 [Cucumis sativus] >KAE8646488.1 hypothetical protein Csa_016259 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 6.6e-59
Identity = 121/146 (82.88%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALTSSSSSSSSSLNFSLLK+G+SVS KP++RIWM+KP++ PL K+ F L+IRSS+KNKV
Sbjct: 1   MALTSSSSSSSSSLNFSLLKTGLSVSFKPITRIWMVKPTRLPL-KNSFSLRIRSSMKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGN+QRE EIIDLLLKQ+WI LGKG
Sbjct: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNNQREAEIIDLLLKQTWIQLGKG 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
            GG+L HAEK VAV+KDLNINGFNSF
Sbjct: 121 VGGELSHAEKEVAVRKDLNINGFNSF 145

[Close]

BLAST of Tan0008379.2 vs. NCBI nr
Match: XP_038897486.1 (uncharacterized protein LOC120085537 [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 121/145 (83.45%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MA+T S   SSSS N SLLKSG+SVSVKP+SRIWML+P++FPL  SL PLQIRSSIKNKV
Sbjct: 1   MAIT-SCCCSSSSFNVSLLKSGLSVSVKPISRIWMLQPTRFPLKNSL-PLQIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICYADENGEIICEGYDEGPR HQ+L EKGNHQRETEIID LLKQSWIHLGK 
Sbjct: 61  FEDQSEGVICYADENGEIICEGYDEGPRIHQSLPEKGNHQRETEIID-LLKQSWIHLGKA 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNS 146
           GGG+L HAEKGVAVKKD N NGFNS
Sbjct: 121 GGGELSHAEKGVAVKKDFNANGFNS 142

[Close]

BLAST of Tan0008379.2 vs. NCBI nr
Match: XP_022149729.1 (uncharacterized protein LOC111018083 isoform X1 [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 6.8e-56
Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 0


Query: 1   MALT-SSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSK-FPLNKSLFPLQIRSSIKN 60
           MALT SSSSSSSSS N  LLKSG  +S+KP+SR+WML+P+K FPL KSL PLQIRSSIKN
Sbjct: 1   MALTSSSSSSSSSSFNVCLLKSG--LSIKPMSRVWMLRPTKFFPLKKSL-PLQIRSSIKN 60

Query: 61  KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLG 120
           KVFEDQSEGVICYADENGEIICEGYDEGPRFHQN SEK NHQRETEIIDLLLKQSWIHLG
Sbjct: 61  KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNPSEKANHQRETEIIDLLLKQSWIHLG 120

Query: 121 KGGGGDLRHAEKGVAVKKDLNINGFNSFY 148
           K GGG+L  AEKG  +KKD N+NGFNSFY
Sbjct: 121 K-GGGELSRAEKGAPLKKDFNVNGFNSFY 145

[Close]

BLAST of Tan0008379.2 vs. NCBI nr
Match: XP_023548903.1 (uncharacterized protein LOC111807416 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 6.8e-56
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALT     SSSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1   MALT-CCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPAKFPLKKSL-PLQIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICY DENGEI+CEGYDEGPRFH NL EKGNHQRETEIIDLLLKQSWIHLG+ 
Sbjct: 61  FEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQRETEIIDLLLKQSWIHLGR- 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
           GGG+L  A+KGVAV+ D N+NGFNSF
Sbjct: 121 GGGELSQADKGVAVQNDSNVNGFNSF 143

[Close]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL
Match: A0A1S3CGF5 (uncharacterized protein LOC103500644 OS=Cucumis melo OX=3656 GN=LOC103500644 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.9e-62
Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALTSSSSSSSS LNFS LK+G+SVS KP++RIWMLKP++FPL  SL PL+IRSSIKNKV
Sbjct: 1   MALTSSSSSSSSPLNFSHLKTGLSVSFKPVTRIWMLKPTRFPLKNSL-PLRIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGNHQRETEIIDLLLKQSWI LGKG
Sbjct: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNHQRETEIIDLLLKQSWIQLGKG 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
            GG+  HAEKGVAV+KDLNINGFNSF
Sbjct: 121 VGGERSHAEKGVAVRKDLNINGFNSF 145

[Close]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL
Match: A0A0A0K9A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448010 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.0e-57
Identity = 119/146 (81.51%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALT  SSSSSSSLNFSLLK+G+SVS KP++RIWM+KP++ PL K+ F L+IRSS+KNKV
Sbjct: 1   MALT--SSSSSSSLNFSLLKTGLSVSFKPITRIWMVKPTRLPL-KNSFSLRIRSSMKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICYADENGEIICEGYDEGPRFHQN+SEKGN+QRE EIIDLLLKQ+WI LGKG
Sbjct: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNVSEKGNNQREAEIIDLLLKQTWIQLGKG 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
            GG+L HAEK VAV+KDLNINGFNSF
Sbjct: 121 VGGELSHAEKEVAVRKDLNINGFNSF 143

[Close]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL
Match: A0A6J1D7W7 (uncharacterized protein LOC111018083 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018083 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 0


Query: 1   MALT-SSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSK-FPLNKSLFPLQIRSSIKN 60
           MALT SSSSSSSSS N  LLKSG  +S+KP+SR+WML+P+K FPL KSL PLQIRSSIKN
Sbjct: 1   MALTSSSSSSSSSSFNVCLLKSG--LSIKPMSRVWMLRPTKFFPLKKSL-PLQIRSSIKN 60

Query: 61  KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLG 120
           KVFEDQSEGVICYADENGEIICEGYDEGPRFHQN SEK NHQRETEIIDLLLKQSWIHLG
Sbjct: 61  KVFEDQSEGVICYADENGEIICEGYDEGPRFHQNPSEKANHQRETEIIDLLLKQSWIHLG 120

Query: 121 KGGGGDLRHAEKGVAVKKDLNINGFNSFY 148
           K GGG+L  AEKG  +KKD N+NGFNSFY
Sbjct: 121 K-GGGELSRAEKGAPLKKDFNVNGFNSFY 145

[Close]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL
Match: A0A6J1JZ71 (uncharacterized protein LOC111488739 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488739 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.3e-56
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALT      SSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1   MALT----CCSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSL-PLQIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICY DENGEI+CEGYDEGPRF  NL EKGNHQRETEIIDLLLKQSWIHLG+ 
Sbjct: 61  FEDQSEGVICYTDENGEIVCEGYDEGPRFQPNLPEKGNHQRETEIIDLLLKQSWIHLGR- 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
           GGG+L  A+KGVAV+KD N+NGFNSF
Sbjct: 121 GGGELSQADKGVAVQKDSNVNGFNSF 140

[Close]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL
Match: A0A6J1GPC1 (uncharacterized protein LOC111456239 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456239 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55
Identity = 119/146 (81.51%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MALTSSSSSSSSSLNFSLLKSGVSVSVKPLSRIWMLKPSKFPLNKSLFPLQIRSSIKNKV 60
           MALT      SSS N SLLKSG+SVS KP+SRIWMLKP+KFPL KSL PLQIRSSIKNKV
Sbjct: 1   MALT-CCCCCSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSL-PLQIRSSIKNKV 60

Query: 61  FEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDLLLKQSWIHLGKG 120
           FEDQSEGVICY DENGEI+CEGYDEGPRFH NL EKGNHQRETEIIDLLLKQSWIHLGK 
Sbjct: 61  FEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQRETEIIDLLLKQSWIHLGK- 120

Query: 121 GGGDLRHAEKGVAVKKDLNINGFNSF 147
           GGG+L  A+KGVAV+ D N NGFNSF
Sbjct: 121 GGGELSQADKGVAVQNDSNANGFNSF 143

[Close]

BLAST of Tan0008379.2 vs. TAIR 10
Match: AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 49  PLQIRSSIKNKVFEDQSEGVICYADENGEIICEGYDEGPRFHQNLSEKGNHQRETEIIDL 108
           P  IR S KN VFED  +G+ICY D+NGE+ICEGYDEGPR         ++ RE EI+DL
Sbjct: 45  PQPIRYSTKNIVFEDPIQGIICYTDDNGEVICEGYDEGPRCPTQSPMVASYSREVEILDL 104

Query: 109 L 110
           L
Sbjct: 105 L 105

The following BLAST results are available for this feature:

BLAST of Tan0008379.2 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008379.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462240.1	1.4e-61	86.30	PREDICTED: uncharacterized protein LOC103500644 [Cucumis melo]	[more]
XP_004141732.2	6.6e-59	82.88	uncharacterized protein LOC101211901 isoform X1 [Cucumis sativus] >KAE8646488.1 ...	[more]
XP_038897486.1	1.4e-56	83.45	uncharacterized protein LOC120085537 [Benincasa hispida]	[more]
XP_022149729.1	6.8e-56	82.55	uncharacterized protein LOC111018083 isoform X1 [Momordica charantia]	[more]
XP_023548903.1	6.8e-56	81.51	uncharacterized protein LOC111807416 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0008379.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGF5	6.9e-62	86.30	uncharacterized protein LOC103500644 OS=Cucumis melo OX=3656 GN=LOC103500644 PE=...	[more]
A0A0A0K9A8	3.0e-57	81.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448010 PE=4 SV=1	[more]
A0A6J1D7W7	3.3e-56	82.55	uncharacterized protein LOC111018083 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JZ71	7.3e-56	80.82	uncharacterized protein LOC111488739 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GPC1	1.6e-55	81.51	uncharacterized protein LOC111456239 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Tan0008379.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14280.1	1.8e-14	57.38	unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34206:SF1	OS06G0193300 PROTEIN	coord: 1..141
None	No IPR available	PANTHER	PTHR34206	OS06G0193300 PROTEIN	coord: 1..141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0008379	Tan0008379	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008379.2-five_prime_utr	Tan0008379.2-five_prime_utr-LG06:766975..767115	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008379.2-exon	Tan0008379.2-exon-LG06:766975..767292	exon
Tan0008379.2-exon	Tan0008379.2-exon-LG06:767642..767766	exon
Tan0008379.2-exon	Tan0008379.2-exon-LG06:767878..768285	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008379.2-cds	Tan0008379.2-cds-LG06:767116..767292	CDS
Tan0008379.2-cds	Tan0008379.2-cds-LG06:767642..767766	CDS
Tan0008379.2-cds	Tan0008379.2-cds-LG06:767878..768019	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008379.2-three_prime_utr	Tan0008379.2-three_prime_utr-LG06:768020..768285	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0008379.2	Tan0008379.2-protein	polypeptide