Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACTTAGATCCAAACAAACACCGTAACCATCACCGTCACTAATGTCAGGACTCCTCACGAAATATGGAGGAAAGATCCAAGACTACATAGTCGAGGAGCACAAGGGCGAGCATCACGAGGCGCACAAAGGCGAGCACCACGAGGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGATAAGATCAAAGATAAGATCCATGGAGATGATCATGATGAGAAAGGTGAGAAGTAAAAGGGCGATGGCGAGCACCACCACCACGAAGGCGGTGGCCATAGCAGCAGCAGCCACAGCGATAGCGACTGATCTATCATTCCGATCGTGATTTCGCGTCCCTCTGTGTGTGTCTTTAATAAACTTCCCTAATCTCCCTGTTGCTCTTTATATCAGCCTCTGTTTTTCCACTTCTACTCGTTTTTAATGTAAAATCCAGTGTGGTGTATAATAAAAGATCCCAATGTTAGGAC
mRNA sequence
CAAACTTAGATCCAAACAAACACCGTAACCATCACCGTCACTAATGTCAGGACTCCTCACGAAATATGGAGGAAAGATCCAAGACTACATAGTCGAGGAGCACAAGGGCGAGCATCACGAGGCGCACAAAGGCGAGCACCACGAGGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGATAAGATCAAAGATAAGATCCATGGAGATGATCATGATGAGAAAGGTGAGAAGTAAAAGGGCGATGGCGAGCACCACCACCACGAAGGCGGTGGCCATAGCAGCAGCAGCCACAGCGATAGCGACTGATCTATCATTCCGATCGTGATTTCGCGTCCCTCTGTGTGTGTCTTTAATAAACTTCCCTAATCTCCCTGTTGCTCTTTATATCAGCCTCTGTTTTTCCACTTCTACTCGTTTTTAATGTAAAATCCAGTGTGGTGTATAATAAAAGATCCCAATGTTAGGAC
Coding sequence (CDS)
ATGTCAGGACTCCTCACGAAATATGGAGGAAAGATCCAAGACTACATAGTCGAGGAGCACAAGGGCGAGCATCACGAGGCGCACAAAGGCGAGCACCACGAGGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGATAAGATCAAAGATAAGATCCATGGAGATGATCATGATGAGAAAGGTGAGAAGTAA
Protein sequence
MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDDHDEKGEK
Homology
BLAST of Tan0007238 vs. ExPASy Swiss-Prot
Match:
O04132 (Protein SRC1 OS=Glycine max OX=3847 GN=SRC1 PE=2 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 5.0e-12
Identity = 46/78 (58.97%), Postives = 52/78 (66.67%), Query Frame = 0
Query: 1 MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLI 60
MSG++ K GG ++ EH GEH HKGEHH EHKGEH G+ EHKEGL+
Sbjct: 1 MSGIIHKIEETLHVGGHKKEEHKGEHHGEHKGEHKGEHHGEHKGEHKGEQHHGEHKEGLV 60
Query: 61 DKIKDKIHGDDHDEKGEK 70
DKIKDKIHGD HD KGEK
Sbjct: 61 DKIKDKIHGDGHD-KGEK 77
BLAST of Tan0007238 vs. NCBI nr
Match:
XP_008443295.1 (PREDICTED: protein SRC1 [Cucumis melo] >KAA0053854.1 zinc transporter ZIP6 [Cucumis melo var. makuwa] >TYK25548.1 zinc transporter ZIP6 [Cucumis melo var. makuwa])
HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIK 60
MSG + K G K+ +I +HKGEHH+AHKGEHH+EH K EH G+ HKEG+I+KIK
Sbjct: 1 MSGFIEKIGEKL--HIGGDHKGEHHDAHKGEHHDEHKKHEKKEEHHGEG-HKEGIIEKIK 60
Query: 61 DKIHGDD--HDEKGEK 70
DKIHG D HDEKGEK
Sbjct: 61 DKIHGGDGHHDEKGEK 73
BLAST of Tan0007238 vs. NCBI nr
Match:
KAG7028450.1 (Protein SRC1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 74.3 bits (181), Expect = 4.5e-10
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIK 60
M+G++ K G K+ +I +HKGEHHE K EH EH+ +HG KSE HKEGL++KIK
Sbjct: 1 MAGIMEKIGEKL--HIGGDHKGEHHEKDKHEHEHEHEKKHGEKSEHHGEGHKEGLMEKIK 60
Query: 61 DKIHGDDHDEKGEK 70
DKIHGD HDEKGEK
Sbjct: 61 DKIHGDHHDEKGEK 72
BLAST of Tan0007238 vs. NCBI nr
Match:
XP_011652200.1 (protein SRC1 [Cucumis sativus] >KAE8651191.1 hypothetical protein Csa_001440 [Cucumis sativus])
HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEA----HKGEHHEEHK--GEHGGKSEHKEGLIDKI 60
MSG + K G K+ +I +HKGEHH+A HKGEHH+EHK EH G+ HKEG++DKI
Sbjct: 1 MSGFIEKIGEKL--HIGGDHKGEHHDAHKGEHKGEHHDEHKKHEEHHGEGAHKEGIMDKI 60
Query: 61 KDKIH-GDDHDEKGEK 70
KDKIH GD H+EKGEK
Sbjct: 61 KDKIHGGDHHEEKGEK 74
BLAST of Tan0007238 vs. NCBI nr
Match:
XP_038903205.1 (protein SRC1 [Benincasa hispida])
HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09
Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEH-KGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKI 60
MSG + K G K+ +I +H KGEHH+ HKGEHH+EHK +HG E HKEGLI+KI
Sbjct: 1 MSGFIEKIGEKL--HIGGDHNKGEHHDGHKGEHHDEHK-KHGKSEEHHGEGHKEGLIEKI 60
Query: 61 KDKIHGDDHDEKGEK 70
KDKIHG DHDEKGEK
Sbjct: 61 KDKIHG-DHDEKGEK 71
BLAST of Tan0007238 vs. NCBI nr
Match:
KAG4933739.1 (hypothetical protein JHK87_047741 [Glycine soja])
HSP 1 Score: 71.2 bits (173), Expect = 3.8e-09
Identity = 46/78 (58.97%), Postives = 52/78 (66.67%), Query Frame = 0
Query: 1 MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLI 60
MSG++ K GG ++ EH GEH HKGEHH EHKGEH G+ EHKEGL+
Sbjct: 1 MSGIIHKIEETLHVGGHKKEEHKGEHHGEHKGEHKGEHHGEHKGEHKGEQHHGEHKEGLV 60
Query: 61 DKIKDKIHGDDHDEKGEK 70
DKIKDKIHGD HD KGEK
Sbjct: 61 DKIKDKIHGDGHD-KGEK 77
BLAST of Tan0007238 vs. ExPASy TrEMBL
Match:
A0A5A7UF86 (Zinc transporter ZIP6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007000 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIK 60
MSG + K G K+ +I +HKGEHH+AHKGEHH+EH K EH G+ HKEG+I+KIK
Sbjct: 1 MSGFIEKIGEKL--HIGGDHKGEHHDAHKGEHHDEHKKHEKKEEHHGEG-HKEGIIEKIK 60
Query: 61 DKIHGDD--HDEKGEK 70
DKIHG D HDEKGEK
Sbjct: 61 DKIHGGDGHHDEKGEK 73
BLAST of Tan0007238 vs. ExPASy TrEMBL
Match:
A0A1S3B8E4 (protein SRC1 OS=Cucumis melo OX=3656 GN=LOC103486916 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIK 60
MSG + K G K+ +I +HKGEHH+AHKGEHH+EH K EH G+ HKEG+I+KIK
Sbjct: 1 MSGFIEKIGEKL--HIGGDHKGEHHDAHKGEHHDEHKKHEKKEEHHGEG-HKEGIIEKIK 60
Query: 61 DKIHGDD--HDEKGEK 70
DKIHG D HDEKGEK
Sbjct: 61 DKIHGGDGHHDEKGEK 73
BLAST of Tan0007238 vs. ExPASy TrEMBL
Match:
A0A0B2SHK1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_035393 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 1.9e-09
Identity = 46/78 (58.97%), Postives = 52/78 (66.67%), Query Frame = 0
Query: 1 MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLI 60
MSG++ K GG ++ EH GEH HKGEHH EHKGEH G+ EHKEGL+
Sbjct: 1 MSGIIHKIEETLHVGGHKKEEHKGEHHGEHKGEHKGEHHGEHKGEHKGEQHHGEHKEGLV 60
Query: 61 DKIKDKIHGDDHDEKGEK 70
DKIKDKIHGD HD KGEK
Sbjct: 61 DKIKDKIHGDGHD-KGEK 77
BLAST of Tan0007238 vs. ExPASy TrEMBL
Match:
A0A0R0FQD3 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G187600 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 1.9e-09
Identity = 46/78 (58.97%), Postives = 52/78 (66.67%), Query Frame = 0
Query: 1 MSGLLTK------YGGKIQDYIVEEHKGEHHEAHKGEHHEEHKGEHGGK---SEHKEGLI 60
MSG++ K GG ++ EH GEH HKGEHH EHKGEH G+ EHKEGL+
Sbjct: 1 MSGIIHKIEETLHVGGHKKEEHKGEHHGEHKGEHKGEHHGEHKGEHKGEQHHGEHKEGLV 60
Query: 61 DKIKDKIHGDDHDEKGEK 70
DKIKDKIHGD HD KGEK
Sbjct: 61 DKIKDKIHGDGHD-KGEK 77
BLAST of Tan0007238 vs. ExPASy TrEMBL
Match:
A0A1B5FL75 (Cold and drought regulatory protein (Fragment) OS=Cajanus cajan OX=3821 GN=CdCDR PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 3.2e-09
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 1 MSGLLTKYGGKIQDYIVEEHKGEHHEA-HKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIH 60
MSG++ K + EEHKGEHH+ HKGEHH EHKGEH G EHKEG +DK+KDKIH
Sbjct: 1 MSGIIHKIEETFHGHKNEEHKGEHHKGEHKGEHHGEHKGEHHG--EHKEGFMDKVKDKIH 60
Query: 61 GDDHDEKGEK 70
GD + KGEK
Sbjct: 61 GDG-EHKGEK 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| O04132 | 5.0e-12 | 58.97 | Protein SRC1 OS=Glycine max OX=3847 GN=SRC1 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008443295.1 | 2.6e-10 | 61.84 | PREDICTED: protein SRC1 [Cucumis melo] >KAA0053854.1 zinc transporter ZIP6 [Cucu... | [more] |
| KAG7028450.1 | 4.5e-10 | 59.46 | Protein SRC1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_011652200.1 | 7.7e-10 | 60.53 | protein SRC1 [Cucumis sativus] >KAE8651191.1 hypothetical protein Csa_001440 [Cu... | [more] |
| XP_038903205.1 | 2.9e-09 | 62.67 | protein SRC1 [Benincasa hispida] | [more] |
| KAG4933739.1 | 3.8e-09 | 58.97 | hypothetical protein JHK87_047741 [Glycine soja] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UF86 | 1.3e-10 | 61.84 | Zinc transporter ZIP6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35... | [more] |
| A0A1S3B8E4 | 1.3e-10 | 61.84 | protein SRC1 OS=Cucumis melo OX=3656 GN=LOC103486916 PE=4 SV=1 | [more] |
| A0A0B2SHK1 | 1.9e-09 | 58.97 | Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_035393 PE=4 SV=1 | [more] |
| A0A0R0FQD3 | 1.9e-09 | 58.97 | Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G187600 PE=4 SV=1 | [more] |
| A0A1B5FL75 | 3.2e-09 | 61.43 | Cold and drought regulatory protein (Fragment) OS=Cajanus cajan OX=3821 GN=CdCDR... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
