Tan0000845 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCATATATAAAAGTAAAAGTGCTTCTTCTCTTGCATATAAATCATCACCAAAACTATAGCCATCTAAGTCATTATTTGGTGGTGAATTGAAGCGCTTTGAAGAAGTGATTTTGCCATTTTGTTCACGTTTTTTGAACAGAAGCGAAGAAAGATGTCGAGTCCGAGTATGAGGCAAAGTTGGAGAAATGTAATTCAATCAAATCAGCCGTTTTCTCCAGAAAAAAGTTGGGAAGAAGGGAACGATGGCAGCCATAAGTTGAGCATGAAACTCACAGGTAAATTTAATTACCCTCAATTATAAATAAATAAATAAATTACAAAAATATCCTTATTTTTTCAAAAGTTACGATTTTATCTTCACCCTTCATAAACCTCTCAAAACCACCTTTGAAGTAGAAATTTATTAGAGACCGTAGTTTTTTTTTCCTCTTTAAACCGACTGACTGGTTGGTTCAGTCGGTTTATATATATATATATTATTTATAATTATTGCTTAATATATTTGTGAGATATAATATCAATATAAGAAAATCTATATGATTTTTGTTTTTTTTAATAATAATAATAATTATTATTATTTTATATATATTAAAAAAAAATCGGTCAGTTTGGTCGGGTGGGGCTTTTGCCCCAAACCGACTCTGACCGAAAAGACACAAAAATCGACCGACCGACCTTGGTTCAGCTGATTTCGATCGGTCGAATCAATTTTTGGTCTTTTTTTGCTCACCCTTACCTAAAACGATGTGACAGTAACTTGGATGCTTGTAAGTTTAAAAGACCAGGGGCATGCCGGTCTAATGATTTTTTTCTACTTCAATGGTAGTTTTGAAACATTTTAGGAAAGGTTGAGGGTAATGTTGCAACTCATTGAAATATTTTAAAAAAGGTTAAGGGTAATATTGCAACTTTTAAAACAATATGAGTATTTTTTTATATATATATTTTAGCAATTTAATTAAAATCTAGGTTAAAATACCATATTAGTCTCTTTCAATAAGTATAAAATTGGTCTCTATTGTTATTTTATTATTAACTATTTGTCTTCACTCCTATACATTTTTTGAAAATACATTCACTTGATGTCTTTTTAAAATTATTATTATTATTTAACTAATTTCAATAAAAAGTAACTTCAAACTACCAATAGAGACAATTTTTAAAATTTATAAATACAAGGGTAAAATTAAAACATTTGAGGTCATGTTCGATAACCATTTGGTTTTTTATTTTTTAAAATTAATCCAAAAAATACTATTTTTACCCATGAATTTCTATGTTTTCTTGCATACTTTGTACATATGTTTTCAAAAACCAAGCTAAGTTAAAAAAAAATAATAATAAATCAAAAACTTATTTTTGTTTTTGAAATTTGGCTAGAACCTTAAATGACACCTCAAAAAGGATGAAAATCATTGTAGAGAATATGAAAAAAACAAAAAAAAAAATTGGGGGAAAAACAAGCATAATTTTCAAAACAAAAAATCAAATTATTATCAAACGGTTCTAAAAGTTCACGGACTAAAGTGAATTGAAGTGAAACCCAAAGGAGAGAGAGAGACAAAATTATATTTATTTACACCTAAAATGTAATTAAATTAATTAGATTTAATATTTAATTAATGACTTGCAATTGATTTTTGTATAGGTTTTTCAAAGGATCAACTACGAATAAACTTGAATACAAGATCAAAGACTCTTATAGTTACGGGAATGAAAACAGATGGCTTCAATGTGACTCGTTTAAATGAACGCATTCAAATTAAAGAAGCATGTTCATTAGATGGAGTCTCAGCAAAATTATTTTCTGATCATACTCTTACTGTTACATTCCCCAAAAACCAATAAATTAAATTAATCTTCATTTTATTTCTATCCAAATCAAAAAATTTACTTTGTTTAAATTAGTGAATAAATATCAACTTCTATATATGTGAGTTGGTGTATAAATTTGTTTTCTAAAGTTGTAATCAAATTGTGGGTAAAGGATCGATATCGATCAATGATGTTATATTGTGTACCAATGAAACCACGTTATCTAATATTATCAATCGACTCGTGTGGTTGTGTTTGTGGAATGAAGAAAAACCTATATTTGTTTGTTGTTTTTGAAATTGGTCACGCGAGATTTAATTTTACTTGAACAAATAATAGTATTGTGTATTTGTTTGTTATGAATAAAGTGAACCTTTATATATCTCTACATGCGAGAAACTATTTGTTGAAACTTTTCTTTGGGAATCGAAGGGTGCTTTTGATTGGGGATTCAAAAACAGAATTTTGAAAACAATAGATTTAATGGAAAAAAAAAAAGATATGGTTGTGTTTTATATGTTTCATTGTTTTTTTTAATGTATGTATTTAGTGGTAGATTTTGAATCGGAAAACAAATAGAAACATATAGATGTTTTTTTCTTTTTTTCTTTTTTGTCAAAGAGAGCATAGTTTAATTGACATCTCGAATGTATTAATGAGTAATGAC GGCATATATAAAAGTAAAAGTGCTTCTTCTCTTGCATATAAATCATCACCAAAACTATAGCCATCTAAGTCATTATTTGGTGGTGAATTGAAGCGCTTTGAAGAAGTGATTTTGCCATTTTGTTCACGTTTTTTGAACAGAAGCGAAGAAAGATGTCGAGTCCGAGTATGAGGCAAAGTTGGAGAAATGTAATTCAATCAAATCAGCCGTTTTCTCCAGAAAAAAGTTGGGAAGAAGGGAACGATGGCAGCCATAAGTTGAGCATGAAACTCACAGGTTTTTCAAAGGATCAACTACGAATAAACTTGAATACAAGATCAAAGACTCTTATAGTTACGGGAATGAAAACAGATGGCTTCAATGTGACTCGTTTAAATGAACGCATTCAAATTAAAGAAGCATGTTCATTAGATGGAGTCTCAGCAAAATTATTTTCTGATCATACTCTTACTGTTACATTCCCCAAAAACCAATAAATTAAATTAATCTTCATTTTATTTCTATCCAAATCAAAAAATTTACTTTGTTTAAATTAGTGAATAAATATCAACTTCTATATATGTGAGTTGGTGTATAAATTTGTTTTCTAAAGTTGTAATCAAATTGTGGGTAAAGGATCGATATCGATCAATGATGTTATATTGTGTACCAATGAAACCACGTTATCTAATATTATCAATCGACTCGTGTGGTTGTGTTTGTGGAATGAAGAAAAACCTATATTTGTTTGTTGTTTTTGAAATTGGTCACGCGAGATTTAATTTTACTTGAACAAATAATAGTATTGTGTATTTGTTTGTTATGAATAAAGTGAACCTTTATATATCTCTACATGCGAGAAACTATTTGTTGAAACTTTTCTTTGGGAATCGAAGGGTGCTTTTGATTGGGGATTCAAAAACAGAATTTTGAAAACAATAGATTTAATGGAAAAAAAAAAAGATATGGTTGTGTTTTATATGTTTCATTGTTTTTTTTAATGTATGTATTTAGTGGTAGATTTTGAATCGGAAAACAAATAGAAACATATAGATGTTTTTTTCTTTTTTTCTTTTTTGTCAAAGAGAGCATAGTTTAATTGACATCTCGAATGTATTAATGAGTAATGAC ATGTCGAGTCCGAGTATGAGGCAAAGTTGGAGAAATGTAATTCAATCAAATCAGCCGTTTTCTCCAGAAAAAAGTTGGGAAGAAGGGAACGATGGCAGCCATAAGTTGAGCATGAAACTCACAGGTTTTTCAAAGGATCAACTACGAATAAACTTGAATACAAGATCAAAGACTCTTATAGTTACGGGAATGAAAACAGATGGCTTCAATGTGACTCGTTTAAATGAACGCATTCAAATTAAAGAAGCATGTTCATTAGATGGAGTCTCAGCAAAATTATTTTCTGATCATACTCTTACTGTTACATTCCCCAAAAACCAATAA MSSPSMRQSWRNVIQSNQPFSPEKSWEEGNDGSHKLSMKLTGFSKDQLRINLNTRSKTLIVTGMKTDGFNVTRLNERIQIKEACSLDGVSAKLFSDHTLTVTFPKNQ Homology
BLAST of Tan0000845 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 5.2e-21 Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Tan0000845 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of Tan0000845 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata]) HSP 1 Score: 105.5 bits (262), Expect = 2.8e-19 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of Tan0000845 vs. NCBI nr
Match: KAG6578833.1 (Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07 Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of Tan0000845 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.0 bits (149), Expect = 3.6e-06 Identity = 32/99 (32.32%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of Tan0000845 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21 Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Tan0000845 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of Tan0000845 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 9.5e-05 Identity = 26/89 (29.21%), Postives = 49/89 (55.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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