Sgr022040 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr022040
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	replication factor C subunit 2
Location	tig00153874: 186028 .. 199089 (-)
RNA-Seq Expression	Sgr022040
Synteny	Sgr022040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTTCTTCTTCTGGCAACAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTGGGCAACGAAGATGCAGTTTCAAGGCTCCAAGTTATTGCTCGCGACGGCAACATGCCCAATCTCATATTATCTGTATTTCTCCATCTCTAATCCCCATCCAACATTTTTGCAGTTCAATTTTTATTGCAGCCATTAATGACATAGTTCAGCTAGGTTCATGGGATTGAGTTACTTTTTAATTTAGTTTTGAACTTATTTCCAAGATGGTAGTGGACTACTATTTAGTTATGTGAAGAAAAAATCATACAGCTCCGACGTTCTGTTTCTTTGAACTGTTTCCATGGCTGCTGGGGGATGTGGGAACTAGGAAGGCCGGGATATTGTCCTGTTTTTGGCAATCATTTTGGGTTTTTGAAAGCATTGCTGTCAAACGTGCAAAATTTTTCAGCCACCATGGGTTACGGGCGAAGTAAAAGTAGTTTGGGGAATTGGTTAAAACTGGATGGTGGCATCTGCCTAGATATTAAAATACTATGCTCTGATAACCAAATTTTCTAGAATCGGATGAGTTGTCTTGTGAGATTAGTCGAGGTGCCGTAAGCTAGCTCAACCACTTTTGTTCATTAAAAAAGAATGCACAATTTTTCCTTTTGTCTTGCTGTTGGTGCTAATCTACGTAGTTGCTATATACTTGTGTTCTAGGGTCCGCCAGGAACTGGGAAAACGACCAGTATTCTGGCTCTTGCTCACGAGCTCTTGGGACCAAATTACAAGGAGGCTGTACTGGAGCTCAATGCATCAGATGATAGGTGAGATATTCTGTCCGTTCTAAACTTAGGACTTCTCAACTGTTACTTGATCTGTATGTTTTTCTAATCTACGTTCTTATTTAGGGGAATAGATGTTGTGAGGAACAAAATCAAAATGTTTGCCCAAAAGAAAGTTACTTTACCTCCTGGTCGACACAAAGTGGTCATATTGGATGAAGCTGACAGGTAGGTTTTTAATAGATAATGTGATATATCTCATAGCGTATACGGTGCAACAATATCCAAAAATCCGTTTTATGTGTGTGCTAATTCCACTTTCTAGGCACTATTTGTTTCTAAAAGGAACCAGGAGCCCTTTCTCCGATGTTTTCTATTTTAATTTCCCCCTCCCTTTTTGCATTCTTATCCCTCATGTATTTTTGTTTTCTTTTGCGTTGTTCTTCATTTTCTTACTTCATTGATTATTTATTTATTTTGGTGATGTTTATGATTGTGAAAATAATTCAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGAACAATGGAAATATATTCAAACACAACTCGTTTTGCCCTTGCATGTAATACCTCTTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCGATTGTCCGATTTTCAAGATTAACAGATCAGGAGATTCTTGGTCGCCTAATGGTGGTGCTTCAAGCAGAAAAGGTATCAATTGTTTGGACAATGATTAGATCTGCGTTCCTTACTATTGATTTATGTTGGTATAATCACAATCATTCTGATAAATTTAATTGTTGTCATTGGAAATTTCATTCTGCTTAATTATTTTTTGGAGGCAGTATCACTTCTTATTGAAAGCTTGAAAGAAGTACTACTCTAGATCTCATGTAATTTGATTTATTATGCATTGGTCTCATAGTCCTTGGGATGGGAATGACTAGCTTGTTTAGTTATCTCCGTTTATATTCTTAAACTGTATTGTCTATACGGATAAAGAACCTTGTTCCTCTTAAAGTTACTTCTGTTAGGACTGAATTTCTAATAGATATGTGTCTTATACCATTGCCATTTGAACAAAAGTATAACGATGTAATTGCTGATTTTGCATGTTACATCAATATCTTTTCAACATTTGGGAATGGATTCATGGGCATACTTTTTGAGAATTTTTTTCATCTAATGTTGGAGGTAGATTATTATTATTATTATTATTTTTAATGGTGTTGTTGGAGATCATCAGCACCTGTCATGGTAAGTCTATCAACACCTTTGGAAAGCAGGTCTAGTGCTCAAGAATTTTTTTTTCAGAATACATTGAAAATGGAGCGCACATTTGGGATCTTTCTTAGTTGGAAACTAATGGGAGTCTAGACTAACTTGTAAAACAACATTGTAAACTTAGAAAATTATGAAAGACTCATGAAGGTAGTGATAGTCCTTCCATGTTTCATATTCTTGAGAGTGCTAAATGTTCAGATTTTGTAACAAGTCTTTCTTCTCCACATTTGAGAGAACGTGAACATTTTAAACCATTATTATGTCACTAGATGAATTCATGGAAAACCTATAGGTAGAAAGGGTAAAAATATATGTAATGATTCAATAAAATCATTGAGCAGTTAAGCTTATTGATGTCCCTTTAAAAATGGTTGATGCATGTGGTCTAATATTGTAGGAATTTTCTTCTTGGTGTCGCATGACAGATTTATCGTTTCTCCTAATTGAACTTCTTCCTTCGAAATTCTAGTCTCTAGAATGTCAGCATGCTACCTTTTATCATTGTCCCATCTTAGTAGAGGCAAGTTCCTGCTAGTTGAGTCTTGGACCCTTTTAATTTGAGAAAAAGTGGTTGAACTTGAAAGTTGAAACTTTGAAGAGAAGTTGTTGGAGATAGGTGGAACTCTACGTAGGTTAAGAGCTGGTCAAAGTTTCTCCTTTATTAGAAAGCTCGATTTGTTCAAAAGCAATTTTAGTTTGTGGAACAAAGAGGTAATTGGGATGAGGTGAGTATTGAAGATTCCATCCCATGAGAATTGATGTGAAACCCTAGGGTTTGCAGATTAAAAACCCTTCCACTTAAGGAGGACCCCCAATTGTCAAAACCCTAAAACCCCAAATCGATTTAAAATCAACCCCAAGGGAAGAGATAGATTGGAATTACCTTGATGATCAAAGATCCAAGATAAGGAAGACAGGTACTTACCTAGGATTCGAACACTCCACAAGAAGGATGATCAGACCTACCTGAATGTTCTGGTTTGCAACCCTAGTTCAAGAATTGCAAAGGAGAAGATGAGCTCTCAGTCATCACAAAAGCAAAACTGCTCAAATTTCATTCTGTCAAATTCATTCGTCAACAACCTAATGGTGAGGCTTTATATGACCTCCCAATTAAACCCTAAATGCCACATCATTGGCTACATAAAAAAAAAGACGAAGATACCCCTAATTAATATTCTCTAAACAAGATAAAATTGGAAAATAATAAAATTACATCAAAATTCAAAAATAAAATGTGGATCATAATTTGAAGTCCCTGGGCGGTTCATATCATCCCCTCCCCCTTTTGAAGGATTCGTCCTCGAATCCAAACCGATACCTTGTAAAGCAGTTTTAAAGTCGTGAGAAGAAAATTGTGTGACTCTTCTCGGGCTTCTCTCAAAAGGTCTCCCTTGTAAAATAACTTTATAGTCAGAAGATGTCAAAGACTCATCTATTCTTAGATTCCATCTCTTTTGGAAAGAATGTTGATCCTTCCAATTCTCTTGTAGCTTGTGGCCATGGATGGAATTTGAAGCAAGTTTGGAGTTTGGCTTGAGTTGTTCCTTCATTTTGTACTCCACCTCATGCTCTCGGTTATGGTTAGATTTATGGCCAATCTTTGAGCTTTTCTTCATAATCAATGCATTAACAACCTGCAAAAACTCAAAAGAAAAACTAGGAAAACTTGGTTGAAGCTCTACTGTTAGAAAACAAACTCTTTTGTTAAAAAGTTCGAGAATGTTTTGTTTTGAAATTAAGAATGATTGGACCTCACAAGCTTTCAAACTAACATTCTTGGCTTTTATCTCATTTTGATCGCTAGACCGAGTACTACTCACTTGCTTTTCTCTCTCATTCACGTTTTCACACTTTTCTTTTTCAGATATTTCTATTGTTTTTGTCTCAATCTCATGCCTTTTGTTTTCCAACTCACACACATCAAGCTTTACTTCTCTCGGAAGGAATGTTACAAGAGTAGAACCATATGTTACTTTGTGATCTAATGTACTCACAATGTCATCACAAAGTATCATAGTTTCAAGCTCACTATTATCTACTTTCTCTACTTTACTACCATCAACACATGTTTCTCCATAAATAGGTGGTACAAAAGTATTAGTAGGATTACAATCATGTGATTCCTTGCTACCTAATGACCTACTAAGCAAAATATCATCATCATGCATAGGTACAAAATTAGCAATATTCTCTTTACTACTTTCTACCTTATGAAAATACTCAAATATAGTAGGTAAACTAACCTTTTCCATGGGTGTGTTGGCATTGGAACGAGGCGTAGAGTTAGTGTACCTTAAAAATCTCTTTTGAAGCTTCTTTTCTATCTTGATGGCTATGTGCACCATCTCTTCCAAACTATCACAAGGTCGAATTTCTTCTCGTTCGGCAATCACCTCGGCAATCTTTTCACTAAGTCCTTTGTAGAATCGGTCCATGGTAGCTTCCTCATCCTCGCAAAAGTTAATTTCCTCAAGTAATAAGAGCATCTCCTCGTAGTAGCTTTCCACACTCTTGCTCCCTTGTTTCAAAGTTCGCAATTTGTGGAAAGACTTAGGAACAAAACGCTTCCTCATTAGAAGTTTGATCTCTTTCCATGAGGGAATTGCATGGTTTTCACTCCTCCTTCTTTTTGACAACAAAATATTCCACCATGTTAGAGCATAATCCTTGAATGTAGAGACGACAAGTTTTACCTTTCCCTTTTCGCTATATTGGTGGAGATCAAATATGGCATCAATTTCCTCCTCCCAACAAAGGTACTTCTCCGGATTTGAAATATTTCCAAAGAACAATGTAGGCATATTTTCGTCAAAATGATGCTTTGGAACTCTTCTTTGAGTGTACATGGCTGCAAAAAGAGGTTCACATAAAGAAAATTGGGTCTCACAGTCACTCCCTCACATGTTTCACTATAAGATGGTAGTTCACTCGTGTTTACACTCTATAATAATTCTCTTCCTCACAATATTCAATCTCTCTCAAATATAGAGAGTGAAGGACTGAGAGTTTGCAATCAAGAATCTAAGAAAGCAAACAAGTAACAACTCAAGCAAGTATACTTGTAGAGTGTCAAACGTAAGTAAGCAACCCGTGAATGAAAGAAAAAAAAAATAGCTATGACTTCCCTAGGCTTTAAGACCCTAGGTGAGGACTTTATGCACGGACAACTATGCACAATTGGAAACAATGAATCCTAAATAAGATCTAAAACCAAGGACAGAAACAAGAGTAAGAATAATATAAGAACAGAATATTATTGATGAATAAGAAACAAGAGAACAAAAGATTAAATGACGAATTAATTTTTTTTTTTTTTTTTTTAAGCTGCCAAGTACCCAAACCCCGAATCTTAGGATCGTCAACAATATTGTTTTAGAGATTCTTAGAAGTCTCAAACTTAATTTAGCCTTTTAGGACTTTAATCTTGCAACTCAAATTTAGGTTGGGATAGAATTGAAGTACAATAATTGAAAAAAATAAAAGAATTGTGAAGCAGAAAAAAAAATAATAAATAATAGTAATTCTTTTTTTTTGTATTGCAGGCACCTCCTTTTTCCTTTTTCTTTTTTTTTTTTTTTGTTTTCTTCTTTCCTTCTTCCTGCCGCCTACGGCTTTCCTTTTCCTTTTTTTTTTTTTTTTTCTTCTTCTTTCCTTCTTCTTGCCGCCTACGGCTTTCCTTTTCCTTTTTTTTTTTTTTTTTTTTCCTTCTTCCTGCCGCCTACGGCTTTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTACGATAGGACCAACAAATATATATATATAGAATGATAGAGATATAGCAAGATCAAGATCTAAAGTCTAAATAAGAGATCAACAACGAAGAACCCTAAAATTTAAAGCAAACAAACCCTAAGATGGAATTTATTTTTTTTTTGAAAAGAAAAAAAAAAATAAGAATACAAAATCCTAATGATGCAAGTTCTAGACTCAATGAAAAAAAAAAAAAGGCAAGACAAAAATATACCCAATCTAGAGCCTAGGCTCTGATACCAAATGATGTGAAACCCTAGGGTTTGCAGATTAAAAACCCTTCCACTTAAGGAGGACCCCCAATTGTCAAAACCCTAAAACCCCAAATCGATTTAAAATCAACCCCAAGGGAAGAGATAGATTGGAATTACCTTGATGATCAAAGATCCAAGATAAGGAAGACAGGTACTTACCTAGGATTCGAACACTCCACAAGAAGGATGATCAGACCTACCTGAATGTTCTGGTTTGCAACCCTAGTTCAAGAATTGCAAAGGAGAAGATGAGCTCTCAGTCATCACAAAAGCAAAACTGCTCAAATTTCATTCTGTCAAATTCATTCGTCAACAACCTAATGGTGAGGCTTTATATGACCTCCCAATTAAACCCTAAATGCCACATCATTGGCTACATAAAAAAAAAGACGAAGATACCCCTAATTAATATTCTCTAAACAAGATAAAATTGGAAAATAATAAAATTACATCAAAATTCAAAAATAAAATGTGGATCATAATTTGAAGTCCCTGGGCGGTTCATATCCCTCTTATTTCAGGTTTACGTGTTACAACTCCTCTTATCCCATGGACTGAGAAAACTAAGGAATCTTCATTGCTTTTTAATTATGAAAGGCAGGAAGCTGGTTCTTTGGAGGGGAGAGTTAGTTCTCGTTGATTATTCTCTCGTGGAATGTGAGGGAGATGCTTGGGTTCCCTGGCATGAAGAATTGTTGCTAAAGATACTTTGCTCAAGTTTAATCTTGACTTTGCCATTTTCCTAAAAAAGCTGAAGTCCATTGATAAGAGGCTTATCAAGTTCATTTGGAGTTCCATAGGTGTTGCGTGGACTTCTTATAATGTTGTGGGTTCCTCTTGTGGCATAATTATTTTCTGGAAGAACCCTTTTGTTTGTGTTACCCAGGTGGTAAAAGGTTTGTTCTCTCTATGCCATTGGTTATGACTGATATAGTTTGTTGGTGGCTCTCATGCGTCTAAGCCAGCAGGTAGAAGGGATAGACACAAGTTGTAGACGCTATATGACTTGCAAGGCTAGTCCCTTGTCTTTGACATTGATATAGAAAGCATGTTGTTGGCGTTCTTTAAAGGCATTTATACAAAAGAGGAAACCTTAAAGACTCCCTTCTAACTTATCTTGGGATCTTATTTTGGATGTAGATGGTGATTACCTTGAAAGGCCTTCTTTGGAGGAGATTAATTGGGTTGTGGACAACTTGGGAAACAACAAAGCCACCAGTTTGAATGGTTATATTGTCCATTTTTCCAGAAAGGGGTGGACCATGTTTAAAATTGATTTCTTGGACGCATGCCTAGACTTCTTCCAGAAAAATGTTGATGAATTAATGAGGCTTTCATAGCTCTAATTCCTAAAAGAGAGAATGCTTTCAGGGTGGTTGAGTATATACCTATTAATCTCTCTACAATCTACAAACTTTTGATTGAAGTCCTTGAGCGACTTAAAGAAGTCCTTCTTTGTTCCATTTCTGCTAGCCAATTGTATAAGGAAGGACTCCTTTAAGGTGGAAATGCAAAACAAGGGAAGGGATAATTTTAAATCTTGATATTTAAAATGCCTATAGATTTCTTTGATAGTGTCCTAGCTACTAAAAGTTTTGGCAATAGGTGGAGGTGATGGATGTATGATTGTATCGCTAGTGTCACCTATTCTATGATAATTATCGGTAGATCAATTAGGAGGATTAAGGCTTCTAGAGGACTTCCCTCTTTCCACTTTTCTTTCCTTCTAGTTGTAGTGGTTGATTACTTTAGCAGGCTGGTTGAAAAGAGAATCAGCAACAATCTTATTGCGGGGTATTGAGCTAATCTTATGGCGTTCGTATTGCAAATCTTCAATTCACTTATGTTATGATACCCACATTGGTTTTCCTTGTGGTGGATGAGGAGAAAATTCTTAACCTGCACAGTCATGGACACACGACATGGAACAATATGTCACCGACATGATGGCACGTCAATTTCTAAAAATGTAGGATACAAACACATTAGGGACACAATTTTTTATTATTATTTTTTAAAAGAATATACTTGTATATATTGATATATTTAAAACTTCAAAGCAGATAAAATGTGTAAATTTAACATAAAAGAAAGAATCTACTTCACTAAGAATATAAAAATTAAGTCAATTGAATGTTTTTTTTAGAGGTTGCAATTGTAGCAATCTTTTAGGCCATTGCAGTATATAAATGGGCTCTCATATGGGCTTTTTCTTATTTGTGAATGGGTAGCCACAACAGCGACCTTTTTTTTGGTTTTTTAAAGAAAACTTGTCATTATTATTTTTAGAGGGATGTAACCACATGTTTGGATGTGTCCATGACATGTCTGAACGTGTCTGAAATTCCAAAAAAAAATGCAGACACTCTTTTTTGCGAGTTAGATCCATGTCCAGCACATGTTCAAACATATCTTAAACGCAGTGTCCGTGTTTCCATGAAAGCTTTTGAAGCAGTTTCTAGTCTCAAGATTAACCTTTTGAAGTCATTGGTGGTAGGTGTCTTTGAAGAGACAAGACAATTAGGTTGATTTATGTGGGGTTGTAGGGTGGCCTCTGGTCCTTTGACTTGGGGCTTCCTCCTAGAGATAATCCAAGATCCTTGTGCTTTTGGAACCCCATTATTCAGAAAATTGAAAGAGGTTGAGTTTTCGCCAATGTTTTAAAAGAGATAGCTTACACTTATTCAAGCTGTTCTTCTGACCTTGCCTACTTATTTTCAATTAGTTCTCTCAGTCTCCTCTTCAATCACTTTAAAATTGATAGATTGGTGAGAAAATTTTCTTGGGAAAATGGGGCTTCTTTGGATGGTGGTTCTCACTAAATTATCTAAAAGATTACTTCCTTGCTACAGAATCGGGGGTGGGGGTGGGTGTGGGAGTTGATATTAGCATAACTAAGGAAAGCCCTACTGGCTAAGTGGCTTTGGCGTTTTGGTAATGAGCCTTCTGACTTCGGAGAAAGGTGCTTGGTGGCTCCTTAAACTCAGTAAATTGAACTGCCTCAAGAGCCTATGGACAAATCTTATTTAGATGGAGGTCCTGTTCAATAGCCAATTTGAAGCTAAAATTGTGGATGGAAGTGCTATGTTTTTTTGGTTGGATGATTGGTGTGGTCAGGGTAGGCTCACGGACCTTTATCCCAGATTTTTCCCCATCTTTCTACTTAAAAGATGCCGAAGGCTAAGGATGTTTGGAATAGTAGCTGGAACTTTCTTTTCAAGAGACCTTTTTTGTTCACAGGGAGATGGAGGAGTGGGAGGGCCTTATGAGAAGCCTTGACAGTAGGAAACCCTCTCATGGGAGAGATCATAGAGTCTGGAAGCCGGAGAGTTGTGGCTGTTATACTATGAAATCAAGGAGAACTTGTCCTTCCAGCTCTCTTTTGTAATTACCTTTGGAGTCTCAAGGTCCCTATGGAGTGTAAAGTTTTCTTCTGGTTGTTCTCGGTGGCCTTCATACCAATGATAAAATTCAAAGTAAAAATTGATAGCAACCAACAAATAATTTAGTGAAAATTAGTGTGTAAAGGTTTTAACAATTAAGCAGATGATATTTGACAATAGATAAAGTTGTCAACACTTTATTAATGATCATTGAGAGATTTTATAAATCATTGATAATTTAACAAGATAATATTAATAAACAACTTATAACTATGGTCGTTTTATTAGTATATAAAAAATATTAATTCAAATAGGCCATGACCATAGTTATACGGTTTTATAGGTTTTAACTATGTTACCCTTTGACAAACTATACTAATTATTTACAAATGTGTTTATACTCAATTTATTATAAAGCACATGAATACAATGATATAATCTTAAATTGCTTTGTCTATATATTTGTTGAACTTGTGGCATTTGACCATTAGTTAAAAGACTACATTATTACTATAAATAATCATTATTATATCTTTTTTTGTAATTCTAAATTATGGTTACATTACCCTAATGACTCTAATATATAGGGTTATCATTAATTACTTATTAGATTAACTTAAATTATAATATAATATAATTAGATTATATTATGGTTAAAACATAAAAAGTTCCATTTATAATCATTATTATAACAGACAAACTATTATAACAGACAAATTTAAAAAATACAGTAAAGTATCCCAAGTAATTTGAGGGACTTGAACACCTTCCCTCTTGAGCAAGCTAAATCTCAAACAACTAAACAATTGCTTGATTTTACCTCAAAATTCATTCTAGTTATGGTTGCCACTACAATTTTCTTGCTAATACATAATATGCTCTTAATTTTCCTGATATTTTTCTACTAATATTTCTAATATTACTCCACCCTAAACCACCTTGTCCTCAAGGTTTGATTGATCAACGGGTTTTCTTGAAGCAAAGTAAAAATTTGTAGATGGGGAAAATCCATAAAAAGGTGACAACCTTTCTTCCCCTCCTTTTATTTTGCTTCTTTCTTTTTTTCCTCTCTCACTTATTTTTCTTTTTTAATTTAAAATATAGAATTCTCTACATGCCTCTCAACCTTCTTACTCCTTTTTAGTCCAAGATTTAGAAAGTAAGCAAAAGTTCCACTCCTGAAGATAGGTTTGATTGTTGGTTCCCAAGTAGGCTTAGAAGTCCACAAAAACATCGAATCAAGCAACTTGGAGATCTATGCCCAAGAGATCAGCAAGTTAATTGAGGGAGTTTGATGTTTGGGGCAAAAGAAAGACTGAGCATGCATATCAGGACATTGTCGGATCACCCTTTATCTCCAGCATGAGCTGGGGTCAATCCCTTGTCGCATTTCTCTACACCAAAGTCTGATCTGTATGATGGATTAGGTGACCCTATCGACCATTAGTTTCATTTTTGGTAACTTAAATCGGCCATTTGCATCCCAAATAATGATACACATGCATTAACTCGTCCATGCCTCAAGCCTTAATGGATTACCCATTGGGCGGTTGAATTGGCTGAAAGAGGAATTCATAAGAGATTTACTGAGTTATCTCGAGTCTTCACTTGAAAATTTGCAATTAGTCACAAGCACGACAAGGAGATATTCAACATGTTTAATGTCTTCCAAGAAGAAAATGAAAACCTGAAAGATTGCATGAAACACTTCAACAAAGCAAATTGCAAGGTGGTTAACTGCAATGACCATGTGTAAGTGCTGCCTTTAGGTGCGATTTTTTTCCAAGTATGGATCTCTTCCACTCTCTTGCTAAGTTGCACCCTGCCAACTTGGAGGAGATGTACCTTGCAGCAAGAAGAGTTAGCCTCTAGAAGAGCCCGAATCATACAGAAACAGAGGAGTCTAGTCAAGGCAAAGGTTCAGACAAGCTATATATTCATGAGCGTGGGGGCCAATTTATGCGCACCTCGGCTAATTTCACGGGACAACTATTTGACCCTACAACATTTAGTTGTCAAGAAACTTGTAGGATTTTAATATCTTTAGTAGGTGACCACCACGAAGTTTGAACCCATTTGCCAAAGTTCCTTTACTTTTTCACACGCTTCAATGCCACTAGGCCAACGTATGGTGGTTGAGAAGCCATATAGATTAATGAAATAGAGAAGGAATGACCAAATAGGTAAGCTCTGTCTTGTGCCACTCAACTTAACATTTCATATGCTAACCTCATCGCCTAGGCAGAGAGTATGTTAGGTGGCCAAGATGGTTGGATGCTAATCATTCTCGCATAGTATGTGGGTTCTACTACAAATTCCGTAGAGGTATGAGCTGAAACAAATGATTGCCCTGTTTTGAAGTGAGAAGTAGAATGTTTATGATTACAGTGTTTTGAAGTGGGCATGAAACAGTATTTGCTATGCTAAAGGGCGACAGAAGACTTAAATCATATGCTATGGAGCCATGAAGGGATATGATAGGAGGAGGTGCTTATCAATCCTCCCTTTCGTAACAGTGGTTGGTTTTGTTGGTAGGCTAAATAAAAGAATTTCCAAGGGATCAGAGGGATCTTGGGTATTTCTTACAAAATTTTTTAGTTTGTTTTGTTTTGTTTTGTTCTTTTTTTTGTGTTGTGATTATCATTTATTTATGATCCTTAACAATAGCTTGAGCCGTTTTTTGTAATTGTTTTGTTTTGTGGACTACTAAGTTTGGGTTTGTTTTTCTTGTAGGCTTTTTCTTTTTAAAATTTATTTAACTTGATGAAAGCTGGTTTCTTATATATATATAAAACTAATAAGCATTTTTTAGCACTTCATTCAGTAGATTATAGAATGATTGTGGATGCATAGCTCTCTGACTGTATTTTTACTACTCTAGTTGATAAGTCCTCTCTTTCCATTTGTTTTCTGTATACACAAGAATTCGTTTAGGTAGTTTAGAATTTATTGTTGTTGCAAAATATGAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGTTGAATAATTTGCAAGCTACATACAGCGGATTCCACTTTGTAAACCAAGACAATGTTTTCAAGGTTCCTATTATGCGTTTTTGTTTTTGCTTACTTTTTATAAACTCAGAAAGCTCCATAAGATATTGCTTGACATGCTTGTTGGCTGTCAGGTCTGCGATCAACCTCATCCACTGCATGTGAAGAATGTGGTGCGTAATGTGCTTGAAGGTAAATTTGATGATGCTTGTGCAGGTCTGAAGCAACTCTACGACTTGGGCTATTCTCCCACCGACATAATAACCACCCTTTTCCGTATCATTAAGAACTATGATATGGCTGAATATCTGAAACTGGAATTCATGAAGGTACGTTAACAACCCGAGTCATCATTTGCCATACCTGAGTTCTGAGTAGCTAAGTTACTCACTCTTTTGATGAATTTACAGGAAACTGGGTTTGCCCATATGAGAATTTGTGATGGAGTTGGTTCTTACCTTCAGCTGTGTGGTCTCTTGGCCAAGCTTTCCGTTGTTCGCGAGACGGCCAAAGCGCCATGA

mRNA sequence

ATGGCGTCTTCTTCTTCTGGCAACAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTGGGCAACGAAGATGCAGTTTCAAGGCTCCAAGTTATTGCTCGCGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCAGGAACTGGGAAAACGACCAGTATTCTGGCTCTTGCTCACGAGCTCTTGGGACCAAATTACAAGGAGGCTGTACTGGAGCTCAATGCATCAGATGATAGGGGAATAGATGTTGTGAGGAACAAAATCAAAATGTTTGCCCAAAAGAAAGTTACTTTACCTCCTGGTCGACACAAAGTGGTCATATTGGATGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGAACAATGGAAATATATTCAAACACAACTCGTTTTGCCCTTGCATGTAATACCTCTTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCGATTGTCCGATTTTCAAGATTAACAGATCAGGAGATTCTTGGTCGCCTAATGGTGGTGCTTCAAGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGTTGAATAATTTGCAAGCTACATACAGCGGATTCCACTTTGTAAACCAAGACAATGTTTTCAAGGTCTGCGATCAACCTCATCCACTGCATGTGAAGAATGTGGTGCGTAATGTGCTTGAAGGTAAATTTGATGATGCTTGTGCAGGTCTGAAGCAACTCTACGACTTGGGCTATTCTCCCACCGACATAATAACCACCCTTTTCCGTATCATTAAGAACTATGATATGGCTGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATATGAGAATTTGTGATGGAGTTGGTTCTTACCTTCAGCTGTGTGGTCTCTTGGCCAAGCTTTCCGTTGTTCGCGAGACGGCCAAAGCGCCATGA

Coding sequence (CDS)

ATGGCGTCTTCTTCTTCTGGCAACAGCAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGCAAGGTCGCTGACATTGTGGGCAACGAAGATGCAGTTTCAAGGCTCCAAGTTATTGCTCGCGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCAGGAACTGGGAAAACGACCAGTATTCTGGCTCTTGCTCACGAGCTCTTGGGACCAAATTACAAGGAGGCTGTACTGGAGCTCAATGCATCAGATGATAGGGGAATAGATGTTGTGAGGAACAAAATCAAAATGTTTGCCCAAAAGAAAGTTACTTTACCTCCTGGTCGACACAAAGTGGTCATATTGGATGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGAACAATGGAAATATATTCAAACACAACTCGTTTTGCCCTTGCATGTAATACCTCTTCAAAAATTATCGAGCCTATTCAGAGTAGATGTGCGATTGTCCGATTTTCAAGATTAACAGATCAGGAGATTCTTGGTCGCCTAATGGTGGTGCTTCAAGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGTTGAATAATTTGCAAGCTACATACAGCGGATTCCACTTTGTAAACCAAGACAATGTTTTCAAGGTCTGCGATCAACCTCATCCACTGCATGTGAAGAATGTGGTGCGTAATGTGCTTGAAGGTAAATTTGATGATGCTTGTGCAGGTCTGAAGCAACTCTACGACTTGGGCTATTCTCCCACCGACATAATAACCACCCTTTTCCGTATCATTAAGAACTATGATATGGCTGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATATGAGAATTTGTGATGGAGTTGGTTCTTACCTTCAGCTGTGTGGTCTCTTGGCCAAGCTTTCCGTTGTTCGCGAGACGGCCAAAGCGCCATGA

Protein sequence

MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSVVRETAKAP

Homology

[Close]

BLAST of Sgr022040 vs. NCBI nr
Match: XP_022152824.1 (replication factor C subunit 2 [Momordica charantia])

HSP 1 Score: 653.7 bits (1685), Expect = 8.7e-184
Identity = 327/332 (98.49%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 1   MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSSSGNSSSYDMPWVEK+RP+KVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 1   MASSSSGNSSSYDMPWVEKFRPTKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLH 240
           MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 332

[Close]

BLAST of Sgr022040 vs. NCBI nr
Match: XP_038905731.1 (replication factor C subunit 2 [Benincasa hispida])

HSP 1 Score: 644.8 bits (1662), Expect = 4.0e-181
Identity = 322/330 (97.58%), Postives = 326/330 (98.79%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           +SSSG+SSSYDMPWVEKYRPS V DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 2   ASSSGSSSSYDMPWVEKYRPSTVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEAD
Sbjct: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKMVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLHVK
Sbjct: 182 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 241

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           MRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of Sgr022040 vs. NCBI nr
Match: XP_008448956.1 (PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 643.7 bits (1659), Expect = 9.0e-181
Identity = 320/330 (96.97%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           +SSSG+SS+YD+PWVEKYRP+KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLHVK
Sbjct: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 241

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           MRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of Sgr022040 vs. NCBI nr
Match: KAG6577570.1 (Replication factor C subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 641.3 bits (1653), Expect = 4.5e-180
Identity = 319/332 (96.08%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 1   MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSS  +SSSYDMPWVEKYRPSKVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLH 240
           MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDACA LKQLYD+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNMVRNVLEGKFDDACAALKQLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 332

[Close]

BLAST of Sgr022040 vs. NCBI nr
Match: XP_022923473.1 (replication factor C subunit 2 [Cucurbita moschata])

HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-179
Identity = 318/332 (95.78%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 1   MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSS  +SSSYDMPWVEKYRPSKVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLH 240
           MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDACA LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 332

[Close]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot
Match: Q9CAM7 (Replication factor C subunit 2 OS=Arabidopsis thaliana OX=3702 GN=RFC2 PE=1 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-173
Identity = 302/331 (91.24%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 2   ASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 61
           +SSS+     Y+ PWVEKYRPSKV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 3   SSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 62

Query: 62  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 63  TSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 122

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGRL+
Sbjct: 123 DSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLL 182

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHV 241
           VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 183 VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHV 242

Query: 242 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVLE KFD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 243 KNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 302

Query: 302 HMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           HMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 303 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot
Match: Q7XRX1 (Replication factor C subunit 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC4 PE=2 SV=2)

HSP 1 Score: 585.5 bits (1508), Expect = 3.8e-166
Identity = 286/330 (86.67%), Postives = 315/330 (95.45%), Query Frame = 0


Query: 2   ASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 61
           +SS+   + +YD+PWVEKYRP++VAD+ GN DAV+RLQ IARDGNMPNLILSGPPGTGKT
Sbjct: 5   SSSAPDLADAYDIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKT 64

Query: 62  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSIL+LAHELLGP+Y+EAVLELNASDDRG+DVVRNKIKMFAQKKVTL PGRHK+VILDEA
Sbjct: 65  TSILSLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEA 124

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRL+DQEILGRLM
Sbjct: 125 DSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLM 184

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHV 241
           +V+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 185 IVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHV 244

Query: 242 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+V+NVL+GKFD+AC+ LKQLYDLGYSPTDIITTLFR+IKNYDMAEYLKLE +KETGFA
Sbjct: 245 KNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFA 304

Query: 302 HMRICDGVGSYLQLCGLLAKLSVVRETAKA 332
           HMRICDGVGS+LQL GLLAK ++VRETAKA
Sbjct: 305 HMRICDGVGSFLQLSGLLAKFALVRETAKA 334

[Close]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot
Match: Q05B83 (Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.7e-127
Identity = 219/320 (68.44%), Postives = 267/320 (83.44%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           S + G++  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTT
Sbjct: 23  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 82

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SIL LA  LLGP  K+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 83  SILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 142

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RL+ 
Sbjct: 143 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDMQILARLLS 202

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           V++ EKV Y  +GLEAIIFTA GDMRQALNNLQ+TYSGF F+N +NVFKVCD+PHPL VK
Sbjct: 203 VIEKEKVQYTDDGLEAIIFTAQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVK 262

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
            ++++ +    D+A   L  L+ LGYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 263 EMIQHCVSADIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 322

Query: 303 MRICDGVGSYLQLCGLLAKL 323
           M+I +GV S LQ+ GLLA+L
Sbjct: 323 MKIAEGVNSLLQMAGLLARL 342

[Close]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot
Match: P35250 (Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3)

HSP 1 Score: 455.7 bits (1171), Expect = 4.6e-127
Identity = 218/320 (68.12%), Postives = 268/320 (83.75%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           S + G++  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTT
Sbjct: 25  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 84

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SIL LA  LLGP  K+A+LELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 85  SILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 144

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RLM 
Sbjct: 145 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMN 204

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           V++ E+VPY  +GLEAIIFTA GDMRQALNNLQ+T+SGF F+N +NVFKVCD+PHPL VK
Sbjct: 205 VIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVK 264

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
            ++++ +    D+A   L  L+ LGYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 265 EMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 324

Query: 303 MRICDGVGSYLQLCGLLAKL 323
           M+I +GV S LQ+ GLLA+L
Sbjct: 325 MKIAEGVNSLLQMAGLLARL 344

[Close]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot
Match: Q641W4 (Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-126
Identity = 215/317 (67.82%), Postives = 266/317 (83.91%), Query Frame = 0


Query: 6   SGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 65
           S  +  Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTTSIL
Sbjct: 23  SKTTGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 82

Query: 66  ALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 125
            LA  LLGP  K+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEADSMT
Sbjct: 83  CLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 142

Query: 126 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQ 185
            GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD ++L RLM V++
Sbjct: 143 DGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLMNVIE 202

Query: 186 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVKNVV 245
            EKVPY  +GLEAIIFTA GDMRQALNNLQ+T+SGF ++N +NVFKVCD+PHPL VK ++
Sbjct: 203 KEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPHPLLVKEMI 262

Query: 246 RNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 305
           ++ ++   D+A   L  L+ LGYSP D+I  +FR+ K + MAEYLKLEF+KE G+ HM++
Sbjct: 263 QHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFPMAEYLKLEFIKEIGYTHMKV 322

Query: 306 CDGVGSYLQLCGLLAKL 323
            +GV S LQ+ GLLA+L
Sbjct: 323 AEGVNSLLQMAGLLARL 339

[Close]

BLAST of Sgr022040 vs. ExPASy TrEMBL
Match: A0A6J1DH57 (replication factor C subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020446 PE=3 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.2e-184
Identity = 327/332 (98.49%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 1   MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSSSGNSSSYDMPWVEK+RP+KVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
Sbjct: 1   MASSSSGNSSSYDMPWVEKFRPTKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLH 240
           MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 332

[Close]

BLAST of Sgr022040 vs. ExPASy TrEMBL
Match: A0A1S3BLV0 (replication factor C subunit 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490969 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.4e-181
Identity = 320/330 (96.97%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           +SSSG+SS+YD+PWVEKYRP+KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLHVK
Sbjct: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 241

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           MRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of Sgr022040 vs. ExPASy TrEMBL
Match: A0A6J1E9R2 (replication factor C subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111431154 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.2e-180
Identity = 318/332 (95.78%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 1   MASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSS  +SSSYDMPWVEKYRPSKVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGK
Sbjct: 1   MASSSGSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL
Sbjct: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180

Query: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLH 240
           MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLH
Sbjct: 181 MVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDACA LKQL+D+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNMVRNVLEGKFDDACAALKQLHDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           AHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 332

[Close]

BLAST of Sgr022040 vs. ExPASy TrEMBL
Match: A0A0A0L763 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038730 PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 317/330 (96.06%), Postives = 326/330 (98.79%), Query Frame = 0


Query: 3   SSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62
           +SSSG+SS+YD+PWVEKYRP+KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61

Query: 63  SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122
           SILALAHELLGPNYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121

Query: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181

Query: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVK 242
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQDNVFKVCDQPHPLHVK
Sbjct: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVK 241

Query: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302
           NVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 242 NVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301

Query: 303 MRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           MRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of Sgr022040 vs. ExPASy TrEMBL
Match: A0A6J1HQ24 (replication factor C subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111465064 PE=3 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.1e-179
Identity = 316/331 (95.47%), Postives = 324/331 (97.89%), Query Frame = 0


Query: 2   ASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 61
           +SS S +SSSYDMPWVEKYRPSKVADIVGNE+AVSRLQVIARDGNMPN ILSGPPGTGKT
Sbjct: 3   SSSGSSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTGKT 62

Query: 62  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLGPNYK+ VLELNASD+RGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 63  TSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 122

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 123 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 182

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHV 241
           VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGF FVNQDNVFKVCDQPHPLHV
Sbjct: 183 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 242

Query: 242 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVLEGKFDDACA LKQLYD+GYSPTDIITTLFRIIKNYDMAEYLKLEFMKE GFA
Sbjct: 243 KNMVRNVLEGKFDDACAALKQLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKEIGFA 302

Query: 302 HMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           HMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 303 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of Sgr022040 vs. TAIR 10
Match: AT1G63160.1 (replication factor C 2 )

HSP 1 Score: 610.1 bits (1572), Expect = 1.0e-174
Identity = 302/331 (91.24%), Postives = 318/331 (96.07%), Query Frame = 0


Query: 2   ASSSSGNSSSYDMPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 61
           +SSS+     Y+ PWVEKYRPSKV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 3   SSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 62

Query: 62  TSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 121
           TSILALAHELLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 63  TSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 122

Query: 122 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 181
           DSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGRL+
Sbjct: 123 DSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLL 182

Query: 182 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHV 241
           VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHV
Sbjct: 183 VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHV 242

Query: 242 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 301
           KN+VRNVLE KFD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 243 KNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 302

Query: 302 HMRICDGVGSYLQLCGLLAKLSVVRETAKAP 333
           HMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 303 HMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of Sgr022040 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-54
Identity = 127/312 (40.71%), Postives = 170/312 (54.49%), Query Frame = 0


Query: 15  PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 74
           PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L GP
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 75  N-YKEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTT 134
             YK  VLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT 
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 135 GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQA 194
            AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 195 EKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVKNVVR 254
           E +    E L  +   + GD+R+A+  LQ+    F                PL V N + 
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLF 249

Query: 255 NVLE-GKFDDACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHM 314
              + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDK 309

Query: 315 RICDGVGSYLQL 316
           R+ DG   YLQL
Sbjct: 310 RLVDGADEYLQL 321

[Close]

BLAST of Sgr022040 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 206.1 bits (523), Expect = 4.5e-53
Identity = 116/322 (36.02%), Postives = 184/322 (57.14%), Query Frame = 0


Query: 15  PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 74
           PWVEKYRP  + D+  + D +  +  +  +  +P+L+L GPPGTGKT++ILA+A +L GP
Sbjct: 40  PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGP 99

Query: 75  NYKEAVLELNASDDRGIDVVRNKIKMFAQ-KKVTLPPGRHKVVILDEADSMTTGAQQALR 134
            Y+  +LELNASDDRGIDVVR +I+ FA  +  +L     K+V+LDEAD+MT  AQ ALR
Sbjct: 100 KYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALR 159

Query: 135 RTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAEKVPYVP 194
           R +E Y+ +TRFAL  N  +KII  +QSRC   RF+ L    +  RL  V++AE++    
Sbjct: 160 RVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSD 219

Query: 195 EGLEAIIFTADGDMRQALNNLQATYSG--------FHFVNQDNVFKVCDQPHPLHVKNVV 254
            GL A++  ++GDMR+ALN LQ+T+             + +++V+     P P  ++ + 
Sbjct: 220 CGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQIS 279

Query: 255 RNVLEGKFDDACAGLKQLYD-LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 314
             +L   FD+    + ++    G +  DI+  +   I    M   ++++ + +      R
Sbjct: 280 HWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYR 339

Query: 315 ICDGVGSYLQLCGLLAKLSVVR 327
           +  G    LQL  +++  +  R
Sbjct: 340 LSFGCNDKLQLGAIISTFTHAR 361

[Close]

BLAST of Sgr022040 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-51
Identity = 125/312 (40.06%), Postives = 166/312 (53.21%), Query Frame = 0


Query: 15  PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 74
           PWVEKYRP +V D+   E+              P+++  GPPGTGKTT+ LA+AH+L GP
Sbjct: 10  PWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 75  N-YKEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTT 134
             YK  VLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT 
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 135 GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQA 194
            AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 195 EKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVKNVVR 254
           E +    E L  +   + GD+R+A+  LQ+    F                PL V N + 
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLF 249

Query: 255 NVLE-GKFDDACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHM 314
              + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDK 309

Query: 315 RICDGVGSYLQL 316
           R+ DG   YLQL
Sbjct: 310 RLVDGADEYLQL 309

[Close]

BLAST of Sgr022040 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-51
Identity = 124/311 (39.87%), Postives = 167/311 (53.70%), Query Frame = 0


Query: 15  PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 74
           PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L G 
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFG- 69

Query: 75  NYKEAVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTTG 134
                VLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT  
Sbjct: 70  -----VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTED 129

Query: 135 AQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAE 194
           AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   E
Sbjct: 130 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 189

Query: 195 KVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQDNVFKVCDQPHPLHVKNVVRN 254
            +    E L  +   + GD+R+A+  LQ+    F                PL V N +  
Sbjct: 190 GLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFT 249

Query: 255 VLE-GKFDDACAGLKQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMR 314
             + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       R
Sbjct: 250 ACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDKR 309

Query: 315 ICDGVGSYLQL 316
           + DG   YLQL
Sbjct: 310 LVDGADEYLQL 314

The following BLAST results are available for this feature:

BLAST of Sgr022040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152824.1	8.7e-184	98.49	replication factor C subunit 2 [Momordica charantia]	[more]
XP_038905731.1	4.0e-181	97.58	replication factor C subunit 2 [Benincasa hispida]	[more]
XP_008448956.1	9.0e-181	96.97	PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo]	[more]
KAG6577570.1	4.5e-180	96.08	Replication factor C subunit 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923473.1	1.7e-179	95.78	replication factor C subunit 2 [Cucurbita moschata]	[more]

BLAST of Sgr022040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAM7	1.4e-173	91.24	Replication factor C subunit 2 OS=Arabidopsis thaliana OX=3702 GN=RFC2 PE=1 SV=1	[more]
Q7XRX1	3.8e-166	86.67	Replication factor C subunit 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC4 ...	[more]
Q05B83	2.7e-127	68.44	Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1	[more]
P35250	4.6e-127	68.13	Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3	[more]
Q641W4	1.0e-126	67.82	Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1	[more]

BLAST of Sgr022040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH57	4.2e-184	98.49	replication factor C subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020446 PE...	[more]
A0A1S3BLV0	4.4e-181	96.97	replication factor C subunit 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349096...	[more]
A0A6J1E9R2	8.2e-180	95.78	replication factor C subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111431154 PE=...	[more]
A0A0A0L763	1.1e-179	96.06	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038730 PE=3 SV...	[more]
A0A6J1HQ24	9.1e-179	95.47	replication factor C subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111465064 PE=3 ...	[more]

BLAST of Sgr022040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63160.1	1.0e-174	91.24	replication factor C 2	[more]
AT1G21690.1	2.4e-54	40.71	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	4.5e-53	36.02	replication factor C subunit 3	[more]
AT1G21690.2	1.1e-51	40.06	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	1.4e-51	39.87	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 46..178 e-value: 3.0E-12 score: 56.7
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 236..321 e-value: 1.7E-20 score: 73.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..171 e-value: 1.7E-57 score: 195.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..234
None	No IPR available	GENE3D	1.10.8.60		coord: 172..235 e-value: 3.0E-20 score: 73.5
None	No IPR available	GENE3D	1.20.272.10		coord: 236..328 e-value: 8.1E-30 score: 104.6
None	No IPR available	PANTHER	PTHR11669:SF5	REPLICATION FACTOR C SUBUNIT 2	coord: 7..330
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 7..330
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 171..233 e-value: 3.6896E-19 score: 77.9545
None	No IPR available	CDD	cd00009	AAA	coord: 29..166 e-value: 3.2066E-26 score: 99.9131
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 50..168 e-value: 4.7E-15 score: 56.2
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 235..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr022040.1	Sgr022040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity