Sgr020667 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr020667
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Descriptioncytochrome c oxidase subunit 6a, mitochondrial-like
Locationtig00153552: 1001753 .. 1001992 (+)
RNA-Seq ExpressionSgr020667
SyntenySgr020667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACCCTGCTCAGCCTAAACGTGGCTTCGCTTCCTCTGCTCACGACGATGCCCGTAAATTTCTCTCGCTGTCTTGCACTCGCACACATACACGCAGCGTATCTGCCCACGAAGAGATAATTTTGTTTGTAATCGAAATCTCTTTGGTATTTCTGATCGTGGTCGTTATGCGCTGCAATTGA

mRNA sequence

ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACCCTGCTCAGCCTAAACGTGGCTTCGCTTCCTCTGCTCACGACGATGCCCGTAAATTTCTCTCGCTGTCTTGCACTCGCACACATACACGCAGCGTATCTGCCCACGAAGAGATAATTTTGTTTGTAATCGAAATCTCTTTGGTATTTCTGATCGTGGTCGTTATGCGCTGCAATTGA

Coding sequence (CDS)

ATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCTCGAAACCCTGCTCAGCCTAAACGTGGCTTCGCTTCCTCTGCTCACGACGATGCCCGTAAATTTCTCTCGCTGTCTTGCACTCGCACACATACACGCAGCGTATCTGCCCACGAAGAGATAATTTTGTTTGTAATCGAAATCTCTTTGGTATTTCTGATCGTGGTCGTTATGCGCTGCAATTGA

Protein sequence

MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARKFLSLSCTRTHTRSVSAHEEIILFVIEISLVFLIVVVMRCN
Homology
[Close]
BLAST of Sgr020667 vs. NCBI nr
Match: XP_022984430.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMA IRSNLLRAAFRGASRNPAQPKRGFASSAHDDAR+
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. NCBI nr
Match: KAG7015416.1 (Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMATIRSNLLRAAFRGASRN AQPKRGFASSAHDDAR+
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. NCBI nr
Match: XP_022929363.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6577328.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMATIRSNLLRAAFRGASRN AQPKRGFASSAHDDAR+
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. NCBI nr
Match: XP_022941809.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG6600678.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031316.1 Cytochrome c oxidase subunit 6a, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDA 38
          MAMATIRSNLLRAAFRGASRN AQPKRGFASSAHDDA
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA 37

[Close]
BLAST of Sgr020667 vs. NCBI nr
Match: XP_023551866.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-08
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMATIRSNLLRAA RGASRN AQPKRGFASSAHDDAR+
Sbjct: 1  MAMATIRSNLLRAALRGASRNSAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMA IRSNLLRAAFRGASRNPAQPKRGFASSAHDDAR+
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMATIRSNLLRAAFRGASRN AQPKRGFASSAHDDAR+
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARE 39

[Close]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match: A0A6J1FPI8 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111447063 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.1e-09
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDA 38
          MAMATIRSNLLRAAFRGASRN AQPKRGFASSAHDDA
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDA 37

[Close]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match: A0A6J1C3V4 (cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008246 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-08
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARK 40
          MAMATIRSNLLRAAFRGAS+N AQPKRGFASSAHDD R+
Sbjct: 1  MAMATIRSNLLRAAFRGASQNSAQPKRGFASSAHDDVRE 39

[Close]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.0e-08
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1  MAMATIRSNLLRAAFRGASRNPAQPKRGFASSAHDDA 38
          MAMATIRSNLLRAA RGASRN AQPKRGFASSAHDDA
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDA 37

The following BLAST results are available for this feature:
BLAST of Sgr020667 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984430.12.6e-0994.87cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima][more]
KAG7015416.14.4e-0994.87Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma ... [more]
XP_022929363.14.4e-0994.87cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG657... [more]
XP_022941809.11.7e-0897.30cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata] >KAG660... [more]
XP_023551866.12.2e-0892.31cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
BLAST of Sgr020667 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J8L11.2e-0994.87cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1ERW32.1e-0994.87cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1FPI88.1e-0997.30cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366... [more]
A0A6J1C3V41.8e-0889.74cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN... [more]
A0A6J1KMD34.0e-0894.59cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ... [more]
BLAST of Sgr020667 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr020667.1Sgr020667.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity