Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAGTAAGATCTTCTCTTCCTTTCTCTATTCTGCATTTAAACCATAAATTATTCCACGAGCCTGCGACAATAGGTAGAAAAGAAATCCTCTCGTGAACTCTGAATCTCTTGAGATGCATTAGTTAGAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA
mRNA sequence
ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA
Coding sequence (CDS)
ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA
Protein sequence
DYGDPSFTQSSSPSLLRRSRSGRNSEPWVSLLKNQRKMHFTNFSVIDRIVRSIRFEPSRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD
Homology
BLAST of Sgr019366 vs. NCBI nr
Match:
XP_004148954.1 (uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_015820 [Cucumis sativus])
HSP 1 Score: 170.2 bits (430), Expect = 1.5e-38
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAA-ARDGEEEVFARLLKE 117
++FWSSR E WPRM PE+AT +K+FGSRAHERYGSEMTLMEAAA A D EEEVF R++KE
Sbjct: 41 AQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKE 100
Query: 118 ATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
ATAALLNSY RR FPYSAWEVKTL IKALVS+EAA LQSQRFA ANESC+
Sbjct: 101 ATAALLNSYTRRRVFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Sgr019366 vs. NCBI nr
Match:
TYK08167.1 (uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa])
HSP 1 Score: 167.9 bits (424), Expect = 7.3e-38
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
++FWSSR E WPRM PETAT +K+FGSRA ERYGSEMTLMEAA EEEVF R++KEA
Sbjct: 40 AQFWSSRSEAWPRMAPETATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99
Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
TAALLNSYARR FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Sgr019366 vs. NCBI nr
Match:
XP_038899192.1 (uncharacterized protein LOC120086555 [Benincasa hispida])
HSP 1 Score: 167.5 bits (423), Expect = 9.5e-38
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARL 117
++FWSS RE WPRM PE+AT +K+FGSRAHERYGSEMTLMEAA AA D EEE F R+
Sbjct: 45 AQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAATVAAADEEEEAFGRV 104
Query: 118 LKEATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
+KEAT ALLNSYARR +FPYSAWEVKTL IKALVS+EAA LQS+RFA ANESC+
Sbjct: 105 VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAVLQSRRFAFANESCN 158
BLAST of Sgr019366 vs. NCBI nr
Match:
XP_008451248.2 (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo] >KAA0059636.1 uncharacterized protein E6C27_scaffold54G00680 [Cucumis melo var. makuwa])
HSP 1 Score: 166.4 bits (420), Expect = 2.1e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA EEEVF R++KEA
Sbjct: 40 AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99
Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
TAALLNSYARR FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Sgr019366 vs. NCBI nr
Match:
KAG6576062.1 (hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 165.2 bits (417), Expect = 4.7e-37
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0
Query: 60 FWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARLLK 119
FWSSRRE WPRM PE+AT +K+FGSRAHERYG+EMTL+ AA A + EEE F R++K
Sbjct: 44 FWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVK 103
Query: 120 EATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
EATAALLNSYARRD FPYSAWEVKTLLIKALVS+EAAALQSQRFA ANESC+
Sbjct: 104 EATAALLNSYARRD-FPYSAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154
BLAST of Sgr019366 vs. ExPASy TrEMBL
Match:
A0A0A0K735 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 7.1e-39
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAA-ARDGEEEVFARLLKE 117
++FWSSR E WPRM PE+AT +K+FGSRAHERYGSEMTLMEAAA A D EEEVF R++KE
Sbjct: 41 AQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKE 100
Query: 118 ATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
ATAALLNSY RR FPYSAWEVKTL IKALVS+EAA LQSQRFA ANESC+
Sbjct: 101 ATAALLNSYTRRRVFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151
BLAST of Sgr019366 vs. ExPASy TrEMBL
Match:
A0A5D3C871 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00560 PE=4 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 3.5e-38
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
++FWSSR E WPRM PETAT +K+FGSRA ERYGSEMTLMEAA EEEVF R++KEA
Sbjct: 40 AQFWSSRSEAWPRMAPETATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99
Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
TAALLNSYARR FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Sgr019366 vs. ExPASy TrEMBL
Match:
A0A5A7UZL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00680 PE=4 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA EEEVF R++KEA
Sbjct: 40 AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99
Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
TAALLNSYARR FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Sgr019366 vs. ExPASy TrEMBL
Match:
A0A1S3BQF6 (uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=4 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0
Query: 58 SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA EEEVF R++KEA
Sbjct: 40 AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99
Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
TAALLNSYARR FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146
BLAST of Sgr019366 vs. ExPASy TrEMBL
Match:
A0A6J1JR18 (uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0
Query: 60 FWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARLLK 119
FWSSRRE WPRM PE+AT +K+FGSRAHERYGSEMTL+ AA A + EEE F R++K
Sbjct: 42 FWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVK 101
Query: 120 EATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
EATAALLNSYARRD FPY+AWEVKTLLIKALVS+EAAALQSQRFA ANESC+
Sbjct: 102 EATAALLNSYARRD-FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 152
BLAST of Sgr019366 vs. TAIR 10
Match:
AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 116.7 bits (291), Expect = 1.8e-26
Identity = 60/110 (54.55%), Postives = 81/110 (73.64%), Query Frame = 0
Query: 59 RFWSSRREHWPRMVPETATASKVFGSR-AHERYGSEMTLMEAAAARDGEEEVFARLLKEA 118
++WSS+RE WPRMVPE +T K+FG A ER+ S++TL+E+ A D E + LLK+
Sbjct: 47 QYWSSQREAWPRMVPERSTVEKIFGVMVAKERWRSDLTLVESTARNDEEGNAYGALLKQG 106
Query: 119 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
AAL+NSYAR+ F Y+ WEVKT+LI+A+VSE AA Q++ FAVAN +CD
Sbjct: 107 IAALINSYARK-SFSYAPWEVKTMLIQAMVSESAARRQAEHFAVANVACD 155
BLAST of Sgr019366 vs. TAIR 10
Match:
AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 0
Query: 65 REHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEATAALLNS 124
R +W + P+T A FG A YG++MT+ EA DG E + LL+EAT ALLNS
Sbjct: 254 RCYWRAIGPDTKVA-VAFGLVAGRIYGTDMTVREAL---DGRGEAYKTLLREATTALLNS 313
Query: 125 YARRDQFPYSAWEVKTLLIKALV--SEEAAALQSQRFAVAN 164
Y FPY++ V T AL+ SE + + RF AN
Sbjct: 314 YNSLG-FPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_004148954.1 | 1.5e-38 | 79.28 | uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical ... | [more] |
| TYK08167.1 | 7.3e-38 | 79.82 | uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa] | [more] |
| XP_038899192.1 | 9.5e-38 | 75.44 | uncharacterized protein LOC120086555 [Benincasa hispida] | [more] |
| XP_008451248.2 | 2.1e-37 | 78.90 | PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo] >KAA0059636.1 unc... | [more] |
| KAG6576062.1 | 4.7e-37 | 77.68 | hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K735 | 7.1e-39 | 79.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1 | [more] |
| A0A5D3C871 | 3.5e-38 | 79.82 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7UZL8 | 1.0e-37 | 78.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A1S3BQF6 | 1.0e-37 | 78.90 | uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=... | [more] |
| A0A6J1JR18 | 2.3e-37 | 77.68 | uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G20515.1 | 1.8e-26 | 54.55 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT2G16630.1 | 2.1e-06 | 40.59 | Pollen Ole e 1 allergen and extensin family protein | [more] |
