Sgr019366.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr019366.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Protodermal factor 1 like
Location	tig00153346: 849467 .. 850095 (-)
Sequence length	506
RNA-Seq Expression	Sgr019366.1
Synteny	Sgr019366.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAGTAAGATCTTCTCTTCCTTTCTCTATTCTGCATTTAAACCATAAATTATTCCACGAGCCTGCGACAATAGGTAGAAAAGAAATCCTCTCGTGAACTCTGAATCTCTTGAGATGCATTAGTTAGAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA

mRNA sequence

ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA

Coding sequence (CDS)

ATGATTATGGAGACCCCTCGTTTACTCAATCTTCTTCTCCTTCTCTGCTTCGCCGGAGCAGGAGCGGCCGCAACTCGGAGCCCTGGGTTTCTCTTCTCAAGAACCAGAGGAAGATGCACTTCACAAATTTTTCAGTGATCGATCGGATTGTGAGATCGATCCGATTTGAGCCGTCCAGGTTCTGGAGCAGCAGGAGAGAGCATTGGCCTCGGATGGTGCCGGAAACGGCGACGGCGTCGAAGGTTTTCGGATCGAGAGCACACGAACGGTACGGATCTGAGATGACGTTAATGGAGGCGGCGGCGGCGAGGGACGGCGAGGAGGAGGTTTTCGCTAGACTGCTGAAGGAGGCAACTGCAGCGCTGCTGAACTCGTATGCTAGAAGGGATCAGTTTCCATACTCGGCTTGGGAGGTGAAGACATTGTTGATTAAAGCTTTGGTGTCGGAGGAGGCTGCGGCTCTTCAGTCTCAACGTTTTGCTGTGGCCAATGAATCGTGTGATTGA

Protein sequence

DYGDPSFTQSSSPSLLRRSRSGRNSEPWVSLLKNQRKMHFTNFSVIDRIVRSIRFEPSRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD

Homology

[Close]

BLAST of Sgr019366.1 vs. NCBI nr
Match: XP_004148954.1 (uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_015820 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-38
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAA-ARDGEEEVFARLLKE 117
           ++FWSSR E WPRM PE+AT +K+FGSRAHERYGSEMTLMEAAA A D EEEVF R++KE
Sbjct: 41  AQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKE 100

Query: 118 ATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
           ATAALLNSY RR  FPYSAWEVKTL IKALVS+EAA LQSQRFA ANESC+
Sbjct: 101 ATAALLNSYTRRRVFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of Sgr019366.1 vs. NCBI nr
Match: TYK08167.1 (uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 7.3e-38
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
           ++FWSSR E WPRM PETAT +K+FGSRA ERYGSEMTLMEAA     EEEVF R++KEA
Sbjct: 40  AQFWSSRSEAWPRMAPETATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99

Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
           TAALLNSYARR  FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146

[Close]

BLAST of Sgr019366.1 vs. NCBI nr
Match: XP_038899192.1 (uncharacterized protein LOC120086555 [Benincasa hispida])

HSP 1 Score: 167.5 bits (423), Expect = 9.5e-38
Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARL 117
           ++FWSS RE WPRM PE+AT +K+FGSRAHERYGSEMTLMEAA    AA D EEE F R+
Sbjct: 45  AQFWSSGREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAATVAAADEEEEAFGRV 104

Query: 118 LKEATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
           +KEAT ALLNSYARR +FPYSAWEVKTL IKALVS+EAA LQS+RFA ANESC+
Sbjct: 105 VKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAVLQSRRFAFANESCN 158

[Close]

BLAST of Sgr019366.1 vs. NCBI nr
Match: XP_008451248.2 (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo] >KAA0059636.1 uncharacterized protein E6C27_scaffold54G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
           ++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA     EEEVF R++KEA
Sbjct: 40  AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99

Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
           TAALLNSYARR  FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146

[Close]

BLAST of Sgr019366.1 vs. NCBI nr
Match: KAG6576062.1 (hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.2 bits (417), Expect = 4.7e-37
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 60  FWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARLLK 119
           FWSSRRE WPRM PE+AT +K+FGSRAHERYG+EMTL+ AA    A  + EEE F R++K
Sbjct: 44  FWSSRREAWPRMTPESATVAKIFGSRAHERYGTEMTLLAAATVAVADEEEEEEAFGRVVK 103

Query: 120 EATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
           EATAALLNSYARRD FPYSAWEVKTLLIKALVS+EAAALQSQRFA ANESC+
Sbjct: 104 EATAALLNSYARRD-FPYSAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 154

[Close]

BLAST of Sgr019366.1 vs. ExPASy TrEMBL
Match: A0A0A0K735 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 7.1e-39
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAA-ARDGEEEVFARLLKE 117
           ++FWSSR E WPRM PE+AT +K+FGSRAHERYGSEMTLMEAAA A D EEEVF R++KE
Sbjct: 41  AQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKE 100

Query: 118 ATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
           ATAALLNSY RR  FPYSAWEVKTL IKALVS+EAA LQSQRFA ANESC+
Sbjct: 101 ATAALLNSYTRRRVFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of Sgr019366.1 vs. ExPASy TrEMBL
Match: A0A5D3C871 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00560 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.5e-38
Identity = 87/109 (79.82%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
           ++FWSSR E WPRM PETAT +K+FGSRA ERYGSEMTLMEAA     EEEVF R++KEA
Sbjct: 40  AQFWSSRSEAWPRMAPETATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99

Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
           TAALLNSYARR  FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146

[Close]

BLAST of Sgr019366.1 vs. ExPASy TrEMBL
Match: A0A5A7UZL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00680 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
           ++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA     EEEVF R++KEA
Sbjct: 40  AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99

Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
           TAALLNSYARR  FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146

[Close]

BLAST of Sgr019366.1 vs. ExPASy TrEMBL
Match: A0A1S3BQF6 (uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37
Identity = 86/109 (78.90%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 58  SRFWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEA 117
           ++FWSSR E WPRM PE+AT +K+FGSRA ERYGSEMTLMEAA     EEEVF R++KEA
Sbjct: 40  AQFWSSRSEAWPRMAPESATVAKIFGSRARERYGSEMTLMEAAGG--AEEEVFGRVVKEA 99

Query: 118 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESC 167
           TAALLNSYARR  FPYSAWEVKTLLIKALVS+EAA LQSQRFA ANESC
Sbjct: 100 TAALLNSYARRRDFPYSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 146

[Close]

BLAST of Sgr019366.1 vs. ExPASy TrEMBL
Match: A0A6J1JR18 (uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.3e-37
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 60  FWSSRREHWPRMVPETATASKVFGSRAHERYGSEMTLMEAA----AARDGEEEVFARLLK 119
           FWSSRRE WPRM PE+AT +K+FGSRAHERYGSEMTL+ AA    A  + EEE F R++K
Sbjct: 42  FWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVK 101

Query: 120 EATAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
           EATAALLNSYARRD FPY+AWEVKTLLIKALVS+EAAALQSQRFA ANESC+
Sbjct: 102 EATAALLNSYARRD-FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN 152

[Close]

BLAST of Sgr019366.1 vs. TAIR 10
Match: AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-26
Identity = 60/110 (54.55%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 59  RFWSSRREHWPRMVPETATASKVFGSR-AHERYGSEMTLMEAAAARDGEEEVFARLLKEA 118
           ++WSS+RE WPRMVPE +T  K+FG   A ER+ S++TL+E+ A  D E   +  LLK+ 
Sbjct: 47  QYWSSQREAWPRMVPERSTVEKIFGVMVAKERWRSDLTLVESTARNDEEGNAYGALLKQG 106

Query: 119 TAALLNSYARRDQFPYSAWEVKTLLIKALVSEEAAALQSQRFAVANESCD 168
            AAL+NSYAR+  F Y+ WEVKT+LI+A+VSE AA  Q++ FAVAN +CD
Sbjct: 107 IAALINSYARK-SFSYAPWEVKTMLIQAMVSESAARRQAEHFAVANVACD 155

[Close]

BLAST of Sgr019366.1 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 65  REHWPRMVPETATASKVFGSRAHERYGSEMTLMEAAAARDGEEEVFARLLKEATAALLNS 124
           R +W  + P+T  A   FG  A   YG++MT+ EA    DG  E +  LL+EAT ALLNS
Sbjct: 254 RCYWRAIGPDTKVA-VAFGLVAGRIYGTDMTVREAL---DGRGEAYKTLLREATTALLNS 313

Query: 125 YARRDQFPYSAWEVKTLLIKALV--SEEAAALQSQRFAVAN 164
           Y     FPY++  V T    AL+  SE    + + RF  AN
Sbjct: 314 YNSLG-FPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349

The following BLAST results are available for this feature:

BLAST of Sgr019366.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148954.1	1.5e-38	79.28	uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical ...	[more]
TYK08167.1	7.3e-38	79.82	uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]	[more]
XP_038899192.1	9.5e-38	75.44	uncharacterized protein LOC120086555 [Benincasa hispida]	[more]
XP_008451248.2	2.1e-37	78.90	PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo] >KAA0059636.1 unc...	[more]
KAG6576062.1	4.7e-37	77.68	hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sgr019366.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr019366.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K735	7.1e-39	79.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1	[more]
A0A5D3C871	3.5e-38	79.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UZL8	1.0e-37	78.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BQF6	1.0e-37	78.90	uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=...	[more]
A0A6J1JR18	2.3e-37	77.68	uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125...	[more]

BLAST of Sgr019366.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20515.1	1.8e-26	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G16630.1	2.1e-06	40.59	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33210:SF16	OS04G0517000 PROTEIN	coord: 58..166
IPR039923	Protodermal factor 1	PANTHER	PTHR33210	PROTODERMAL FACTOR 1	coord: 58..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr019366	Sgr019366	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr019366.1.exon2	Sgr019366.1.exon2	exon
Sgr019366.1.exon1	Sgr019366.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr019366.1	cds.Sgr019366.1_2	CDS
cds.Sgr019366.1	cds.Sgr019366.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr019366.1	Sgr019366.1-protein	polypeptide