Sgr001920 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr001920
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00001204: 37781 .. 38745 (+)
RNA-Seq Expression	Sgr001920
Synteny	Sgr001920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTCTGAGGATTTCCTTTGCGTTGAAGCTCCTTCTCTTCTTCGCTCTGCTTCTCATCGCCTCTAGGGTTTCTGCGACGGAGAACACTCCTTCGCTCCACGAAGCTCGTGCTCGTAAGTTCTCTTTCCCCTTCTCTCATGCCTTCGATCCTCCATTCCAATGGCTAGCCCTTCCCTTCTGGTTCATCCTTTAGGGAAGCTTTAGTAGAAAGCCCTGAATTTAATTGTGTCGATATATCGACCTGCTTTGTGATTGATCGAAATTAGGTTAAATTAAAAATTGATTGCTTAAACTTTCATGATTTATCTCGTTTTAACGTTAAAAAATTTTATTTTAATTGTGTTTAGCATAAATTTTAAGTACACCATTGCCATATAAGATTCCTATTAAATTTAACGACAAGGACCCAAATGAGTTCTTATACAAAACTCAGAGTTTGTGTATATGCACGTATGAAAAATGAGAATAATAAGAAATGTTGTTTATTATTATCCGACTTAGGGTTTAAAGAATACCCATTTATAGAAACAGATTGTTTTGTGGCAAAATGCTTATTCAAAGAAGGGATTCGAGAAGACCTCTCTGAACTTAAACTTGTGAGACTTCGAACATTGATTCTCTAATTTAAAGTTTTATCCATTTAAATATAATTTATGTTACGAAATCTTCCAATGTTGTTGTTCATAGCTTTGCTAGACATTTTTTAAGGACTTTTTCTCGTTCGTGGTTTGATCAAAAGGAGATTTCGCCCTTTCGAAATCTTTTATTATATATATAAAAAGAAGAGATATCATCAAAGTTAATTTGGTAACAATTTATTTGTTTGAATTTTTGTTTATGTTTGAAGGTAAGTTGGGTATGGAGTATAGAACCGTTGGGAAGGCTACGTTGGAAGGAAAGAGAGCATCTTTGGATATCCCATGGAGAGGTGGTTATAATCCTCCAAACAACAACCCTTGA

mRNA sequence

ATGGCGTCTCTGAGGATTTCCTTTGCGTTGAAGCTCCTTCTCTTCTTCGCTCTGCTTCTCATCGCCTCTAGGGTTTCTGCGACGGAGAACACTCCTTCGCTCCACGAAGCTCGTGCTCGTAAGTTGGGTATGGAGTATAGAACCGTTGGGAAGGCTACGTTGGAAGGAAAGAGAGCATCTTTGGATATCCCATGGAGAGGTGGTTATAATCCTCCAAACAACAACCCTTGA

Coding sequence (CDS)

ATGGCGTCTCTGAGGATTTCCTTTGCGTTGAAGCTCCTTCTCTTCTTCGCTCTGCTTCTCATCGCCTCTAGGGTTTCTGCGACGGAGAACACTCCTTCGCTCCACGAAGCTCGTGCTCGTAAGTTGGGTATGGAGTATAGAACCGTTGGGAAGGCTACGTTGGAAGGAAAGAGAGCATCTTTGGATATCCCATGGAGAGGTGGTTATAATCCTCCAAACAACAACCCTTGA

Protein sequence

MASLRISFALKLLLFFALLLIASRVSATENTPSLHEARARKLGMEYRTVGKATLEGKRASLDIPWRGGYNPPNNNP

Homology

[Close]

BLAST of Sgr001920 vs. NCBI nr
Match: XP_022141390.1 (uncharacterized protein LOC111011803 [Momordica charantia])

HSP 1 Score: 101.3 bits (251), Expect = 3.8e-18
Identity = 58/77 (75.32%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 1   MASLRISFALKLLLFFALLLIASRVSATENTPSLHE-ARARKLGMEYRTVGKATLEGKRA 60
           MASLRISF LK L FFALLLIASRVSA  +TPS+H+  R RKLGMEYR+VGKA L  K A
Sbjct: 42  MASLRISFVLK-LFFFALLLIASRVSA--STPSIHKRPRIRKLGMEYRSVGKAVLRAKAA 101

Query: 61  SLDIPWRGGYNPPNNNP 77
           S D PW+GGYNPPNNNP
Sbjct: 102 SYDFPWKGGYNPPNNNP 115

[Close]

BLAST of Sgr001920 vs. NCBI nr
Match: KAG6600177.1 (hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-07
Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 1  MASLR-ISFALKLLLFFALLLIASRVSATENTPSLHEARARKLGMEYRTVGKATLEGK-- 60
          M SL+ ISF LKLL+ FALLLIAS +SA +NTP     R RK+GMEY+ VGKA +  K  
Sbjct: 1  MVSLKMISFVLKLLVCFALLLIASPISAMDNTP-----RIRKMGMEYKLVGKAVVVAKPV 60

Query: 61 -RASLDIPWRGGYNPP 73
           + S D PW GGY+ P
Sbjct: 61 RQLSADSPWGGGYHIP 71

[Close]

BLAST of Sgr001920 vs. NCBI nr
Match: TYK18975.1 (hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1  MASLRISFALKLLLFFALLLIASRVSATENTPSLHEARAR-KLGMEYRTVGKATLEGKRA 60
          MAS+ I + +  LLFF LLLI    ++T   P LHE R R K+ MEYR+V K  L  K A
Sbjct: 1  MASINIIWIIFKLLFFTLLLI---TTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPA 60

Query: 61 SLDIPWRGGYNPPNNN 76
            D PW+GGYNPP+NN
Sbjct: 61 VYDFPWKGGYNPPDNN 73

[Close]

BLAST of Sgr001920 vs. NCBI nr
Match: KAG6602002.1 (hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-07
Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 1  MASLRISFALKLLLFFALLLIASRVSATENTPSLHEARARKLGMEYRTVGKATLEGKRAS 60
          M S +IS AL    F ALLL+A  VSA + + S  +   RKL MEY TV KA L  K A 
Sbjct: 1  MGSHKISMALP--FFLALLLVAFTVSAADISASFQKPHIRKLSMEYTTVEKAALRAKPAV 60

Query: 61 LDIPWRGGYNPPNNN 76
           D PW+GGY+PP N+
Sbjct: 61 YDFPWKGGYHPPAND 73

[Close]

BLAST of Sgr001920 vs. NCBI nr
Match: KGN53822.1 (hypothetical protein Csa_015192 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 3.3e-06
Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1  MASL-RISFALKLLLFFALLLIASRVSATENTPSLHEARAR-KLGMEYRTVGKATLEGKR 60
          MAS+  I   +  LLFF LLLI    +++   P LHE   R K+ MEYR+V KA L GK 
Sbjct: 1  MASINNIILIIFKLLFFTLLLI---TTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKP 60

Query: 61 ASLDIPWRGGYNPPNNN 76
          A  D PW+GGYNPP+NN
Sbjct: 61 AVYDFPWKGGYNPPHNN 74

[Close]

BLAST of Sgr001920 vs. ExPASy TrEMBL
Match: A0A6J1CHY3 (uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011803 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 58/77 (75.32%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 1   MASLRISFALKLLLFFALLLIASRVSATENTPSLHE-ARARKLGMEYRTVGKATLEGKRA 60
           MASLRISF LK L FFALLLIASRVSA  +TPS+H+  R RKLGMEYR+VGKA L  K A
Sbjct: 42  MASLRISFVLK-LFFFALLLIASRVSA--STPSIHKRPRIRKLGMEYRSVGKAVLRAKAA 101

Query: 61  SLDIPWRGGYNPPNNNP 77
           S D PW+GGYNPPNNNP
Sbjct: 102 SYDFPWKGGYNPPNNNP 115

[Close]

BLAST of Sgr001920 vs. ExPASy TrEMBL
Match: A0A5D3D619 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00680 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1  MASLRISFALKLLLFFALLLIASRVSATENTPSLHEARAR-KLGMEYRTVGKATLEGKRA 60
          MAS+ I + +  LLFF LLLI    ++T   P LHE R R K+ MEYR+V K  L  K A
Sbjct: 1  MASINIIWIIFKLLFFTLLLI---TTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPA 60

Query: 61 SLDIPWRGGYNPPNNN 76
            D PW+GGYNPP+NN
Sbjct: 61 VYDFPWKGGYNPPDNN 73

[Close]

BLAST of Sgr001920 vs. ExPASy TrEMBL
Match: A0A0A0KZM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1  MASL-RISFALKLLLFFALLLIASRVSATENTPSLHEARAR-KLGMEYRTVGKATLEGKR 60
          MAS+  I   +  LLFF LLLI    +++   P LHE   R K+ MEYR+V KA L GK 
Sbjct: 1  MASINNIILIIFKLLFFTLLLI---TTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKP 60

Query: 61 ASLDIPWRGGYNPPNNN 76
          A  D PW+GGYNPP+NN
Sbjct: 61 AVYDFPWKGGYNPPHNN 74

[Close]

BLAST of Sgr001920 vs. ExPASy TrEMBL
Match: A0A5D3DJ60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00330 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-04
Identity = 37/75 (49.33%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 4  LRISFALKLLLFFALLLIAS-RVSATENTPSLHEARARKLGMEYRTVGKATLEGK---RA 63
          ++IS  LKLL F  LL IAS  VSAT N P LH+   RK+G+EY+   KA +  K     
Sbjct: 6  MKISLMLKLLFFANLLFIASTTVSATNNIPLLHKPPIRKMGVEYKKGEKAVVVPKVNRPT 65

Query: 64 SLDIPWRGGY--NPP 73
          S D+PW GGY   PP
Sbjct: 66 SDDVPWGGGYVHRPP 80

The following BLAST results are available for this feature:

BLAST of Sgr001920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141390.1	3.8e-18	75.32	uncharacterized protein LOC111011803 [Momordica charantia]	[more]
KAG6600177.1	1.0e-07	56.58	hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sorori...	[more]
TYK18975.1	1.4e-07	52.63	hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa]	[more]
KAG6602002.1	5.2e-07	50.67	hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN53822.1	3.3e-06	51.95	hypothetical protein Csa_015192 [Cucumis sativus]	[more]

BLAST of Sgr001920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr001920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHY3	1.8e-18	75.32	uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5D3D619	6.6e-08	52.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KZM0	1.6e-06	51.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1	[more]
A0A5D3DJ60	4.4e-04	49.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sgr001920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr001920.1	Sgr001920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane