Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCTTTAAAACCCTAAGCTCACACCTCCATTGGCCAACAACACACACAAAGACAAGTGTTAAGTGTTAGTAGTAAGCAAGAAGAAAATGGCCAAAGTGTTCATAGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCGTGGCTCGACCTACGCCGAAGGACGACACCTTCACTGACCAAAAGAACTTCCTAACCTATGGTGGCGTCGGTGGCTACTCCGGCATCGGCAGCAACGGTCTCCCATTCGGTGGGCTCGGGGGTGCTGTTGGAGGAACTGGCCCTGGAGGCATTGGTGGAGGAATTGGTGGATTCACAGGCACCGGCATGGGAGGAGGCTTGGGAGGCGGCTTGGGAGGCCTCGGTGGAACCACGGCTGGCGGTCTCGGTGGCGGTCTAGGTGGCGGTCTAGGTGGCGGTCTCGGTGGCGGTCTCGGTGGCGGAGCTGGCGGTGGTTCTGGACTTCCTTAGAGAAGTTACTTAGTTATTTTTTATTTATGTATTCAAAAGTTATTGCAGTTTGAAGTTTATTATTTAAATTCGTGTCAAGAGATGTAGTGGTTAAGTTGTTGTCTAGTCAGCTTATAACATTTGGTTGTGTTTGGTTTTCTATTAAAATTTAGATATGATTATGTTTGTTTGTTCATTTTCTGAGTGAAATACAAACGTCTTTCTTTAGTGGTTT
mRNA sequence
GCCCTTTAAAACCCTAAGCTCACACCTCCATTGGCCAACAACACACACAAAGACAAGTGTTAAGTGTTAGTAGTAAGCAAGAAGAAAATGGCCAAAGTGTTCATAGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCGTGGCTCGACCTACGCCGAAGGACGACACCTTCACTGACCAAAAGAACTTCCTAACCTATGGTGGCGTCGGTGGCTACTCCGGCATCGGCAGCAACGGTCTCCCATTCGGTGGGCTCGGGGGTGCTGTTGGAGGAACTGGCCCTGGAGGCATTGGTGGAGGAATTGGTGGATTCACAGGCACCGGCATGGGAGGAGGCTTGGGAGGCGGCTTGGGAGGCCTCGGTGGAACCACGGCTGGCGGTCTCGGTGGCGGTCTAGGTGGCGGTCTAGGTGGCGGTCTCGGTGGCGGTCTCGGTGGCGGAGCTGGCGGTGGTTCTGGACTTCCTTAGAGAAGTTACTTAGTTATTTTTTATTTATGTATTCAAAAGTTATTGCAGTTTGAAGTTTATTATTTAAATTCGTGTCAAGAGATGTAGTGGTTAAGTTGTTGTCTAGTCAGCTTATAACATTTGGTTGTGTTTGGTTTTCTATTAAAATTTAGATATGATTATGTTTGTTTGTTCATTTTCTGAGTGAAATACAAACGTCTTTCTTTAGTGGTTT
Coding sequence (CDS)
ATGGCCAAAGTGTTCATAGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCGTGGCTCGACCTACGCCGAAGGACGACACCTTCACTGACCAAAAGAACTTCCTAACCTATGGTGGCGTCGGTGGCTACTCCGGCATCGGCAGCAACGGTCTCCCATTCGGTGGGCTCGGGGGTGCTGTTGGAGGAACTGGCCCTGGAGGCATTGGTGGAGGAATTGGTGGATTCACAGGCACCGGCATGGGAGGAGGCTTGGGAGGCGGCTTGGGAGGCCTCGGTGGAACCACGGCTGGCGGTCTCGGTGGCGGTCTAGGTGGCGGTCTAGGTGGCGGTCTCGGTGGCGGTCTCGGTGGCGGAGCTGGCGGTGGTTCTGGACTTCCTTAG
Protein sequence
MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGLGGGAGGGSGLP
Homology
BLAST of Sed0020523 vs. NCBI nr
Match:
XP_022960398.1 (acanthoscurrin-1-like [Cucurbita moschata] >KAG6592858.1 hypothetical protein SDJN03_12334, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025267.1 hypothetical protein SDJN02_11762, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 142.9 bits (359), Expect = 1.9e-30
Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAV
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 GGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTAGG-LGGGLGGGLGGGLGGGL 120
GGTGPGGIGGGIGG G G GG GLGGGL GGLGGT GG LGGGLGG +GGGLGGGL
Sbjct: 61 GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120
Query: 121 GG--GAGGGSGLP 127
GG G GGGSGLP
Sbjct: 121 GGGVGGGGGSGLP 133
BLAST of Sed0020523 vs. NCBI nr
Match:
KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])
HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 106/130 (81.54%), Postives = 116/130 (89.23%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+
Sbjct: 1 MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
Query: 61 GGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGL 120
GG G GG+GGG+GG TG G G GG GGGLGG+GGTT GGLGGGLGGGLGGGLGGGL
Sbjct: 61 GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTT-GGLGGGLGGGLGGGLGGGL 120
Query: 121 GGGAGGGSGL 126
GGG GG SG+
Sbjct: 121 GGGVGGASGV 129
BLAST of Sed0020523 vs. NCBI nr
Match:
XP_023004890.1 (acanthoscurrin-1-like [Cucurbita maxima])
HSP 1 Score: 141.0 bits (354), Expect = 7.2e-30
Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAV
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 GGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------GGLGGTTAGG-LGGGLGGGLG 120
GGTGPGGIGGGIGG G G+GGGLGGGL GGLGGT GG LGGGLGG +G
Sbjct: 61 GGTGPGGIGGGIGGLGGFGGGGAGLGGGLGGGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120
Query: 121 GGLGGGLGGGAGGGSGLP 127
GGLGGG+GG GGGSGLP
Sbjct: 121 GGLGGGVGG--GGGSGLP 136
BLAST of Sed0020523 vs. NCBI nr
Match:
XP_023514578.1 (acanthoscurrin-1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 140.6 bits (353), Expect = 9.4e-30
Identity = 106/130 (81.54%), Postives = 114/130 (87.69%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAV
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 GGTGPGGIGGGIGGFTGTGMGGGLGG---GLGGLGGTTAGG-LGGGLGGGLGGGLGGGLG 120
GGTGPGGIGGGIGG G G GGG GG G GGLGGT GG LGGGLGG +GGGLGGG+G
Sbjct: 61 GGTGPGGIGGGIGGLGGFGGGGGAGGAGLGGGGLGGTIGGGNLGGGLGGTVGGGLGGGVG 120
Query: 121 GGAGGGSGLP 127
G GGGSGLP
Sbjct: 121 G--GGGSGLP 128
BLAST of Sed0020523 vs. NCBI nr
Match:
XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])
HSP 1 Score: 135.2 bits (339), Expect = 3.9e-28
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 0
Query: 6 IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG- 65
+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G
Sbjct: 1 MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60
Query: 66 PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGLGGGAG 125
GG+GGG+GG TG G G GG GGGLGG+GGTT GGLGGGLGGGLGGGLGGGLGGG G
Sbjct: 61 GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTT-GGLGGGLGGGLGGGLGGGLGGGVG 120
BLAST of Sed0020523 vs. ExPASy TrEMBL
Match:
A0A6J1H8T3 (acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 9.1e-31
Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAV
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 GGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTAGG-LGGGLGGGLGGGLGGGL 120
GGTGPGGIGGGIGG G G GG GLGGGL GGLGGT GG LGGGLGG +GGGLGGGL
Sbjct: 61 GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120
Query: 121 GG--GAGGGSGLP 127
GG G GGGSGLP
Sbjct: 121 GGGVGGGGGSGLP 133
BLAST of Sed0020523 vs. ExPASy TrEMBL
Match:
A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 1.2e-30
Identity = 106/130 (81.54%), Postives = 116/130 (89.23%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+
Sbjct: 1 MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60
Query: 61 GGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGL 120
GG G GG+GGG+GG TG G G GG GGGLGG+GGTT GGLGGGLGGGLGGGLGGGL
Sbjct: 61 GGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTT-GGLGGGLGGGLGGGLGGGL 120
Query: 121 GGGAGGGSGL 126
GGG GG SG+
Sbjct: 121 GGGVGGASGV 129
BLAST of Sed0020523 vs. ExPASy TrEMBL
Match:
A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.5e-30
Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAV
Sbjct: 1 MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
Query: 61 GGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------GGLGGTTAGG-LGGGLGGGLG 120
GGTGPGGIGGGIGG G G+GGGLGGGL GGLGGT GG LGGGLGG +G
Sbjct: 61 GGTGPGGIGGGIGGLGGFGGGGAGLGGGLGGGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120
Query: 121 GGLGGGLGGGAGGGSGLP 127
GGLGGG+GG GGGSGLP
Sbjct: 121 GGLGGGVGG--GGGSGLP 136
BLAST of Sed0020523 vs. ExPASy TrEMBL
Match:
A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 1.9e-28
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 0
Query: 6 IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG- 65
+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G
Sbjct: 1 MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60
Query: 66 PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGLGGGAG 125
GG+GGG+GG TG G G GG GGGLGG+GGTT GGLGGGLGGGLGGGLGGGLGGG G
Sbjct: 61 GGGLGGGLGGATGIGGGLGGLGGTGGGLGGIGGTT-GGLGGGLGGGLGGGLGGGLGGGVG 120
BLAST of Sed0020523 vs. ExPASy TrEMBL
Match:
A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 101/132 (76.52%), Postives = 112/132 (84.85%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAV 60
MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIG+NGLPFGGLGGA+
Sbjct: 1 MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60
Query: 61 GGTGPGGIGGGIGGFTGTGMGG--GLGGGLGGLGGTTA-----GGLGGGLGGGLGGGLGG 120
GG GG+GGG+GG G G+GG G+GGGLGGLGG GG GGLGGGLGGGLGG
Sbjct: 61 GG---GGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGGIGGTTGGLGGGLGGGLGG 120
Query: 121 GLGGGAGGGSGL 126
GLGGG GG SG+
Sbjct: 121 GLGGGVGGASGV 129
BLAST of Sed0020523 vs. TAIR 10
Match:
AT4G29030.1 (Putative membrane lipoprotein )
HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 69/129 (53.49%), Postives = 79/129 (61.24%), Query Frame = 0
Query: 1 MAKVFIALLLALVATHAV---ARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLG 60
MAK F + L A+ AR P +DQKN+L YG GGYSG+G NGLPFGG+G
Sbjct: 1 MAKWFFTIFLVFALASALACGARNVPVG--LSDQKNYLGYG--GGYSGVGDNGLPFGGVG 60
Query: 61 GAVGGTGPGGIGGGIGGFTGTGMGGGLGGGLGGLGGTTAGGLGGGLGGGLGGGLGGGLGG 120
G V +GPGG G GGF G GGGLGGGLGG G+ GLGGGLGG G G+G G G
Sbjct: 61 GGV--SGPGG-NLGYGGFGGA--GGGLGGGLGGGAGS---GLGGGLGG--GSGIGAGTSG 115
Query: 121 GAGGGSGLP 127
G+ GG P
Sbjct: 121 GSTGGVHFP 115
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022960398.1 | 1.9e-30 | 82.71 | acanthoscurrin-1-like [Cucurbita moschata] >KAG6592858.1 hypothetical protein SD... | [more] |
| KAA0050560.1 | 2.5e-30 | 81.54 | acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li... | [more] |
| XP_023004890.1 | 7.2e-30 | 78.26 | acanthoscurrin-1-like [Cucurbita maxima] | [more] |
| XP_023514578.1 | 9.4e-30 | 81.54 | acanthoscurrin-1-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_008462124.1 | 3.9e-28 | 81.60 | PREDICTED: acanthoscurrin-1-like [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1H8T3 | 9.1e-31 | 82.71 | acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1 | [more] |
| A0A5A7U5T7 | 1.2e-30 | 81.54 | Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94... | [more] |
| A0A6J1KVV3 | 3.5e-30 | 78.26 | acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1 | [more] |
| A0A1S3CGR1 | 1.9e-28 | 81.60 | acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1 | [more] |
| A0A0A0K9U1 | 2.1e-27 | 76.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G29030.1 | 1.1e-04 | 53.49 | Putative membrane lipoprotein | [more] |
