Sequences
The following sequences are available for this feature:
Legend: exon five_prime_UTR CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATGGCCGCTCCTACCAATCACCGCCGTTGATTTCAACATTTTCCGATCCGTATCTTGATTGATCTGATCTGACCTGATCGGCGCTACGATTTCAAATTGAAGAAGATAGAGTAAATTCGGATCGGAGATTTGAA ATGGAGAGAGAAAAGAGGAAGAAAATGTTGCCGGAGGATAGCGGCGGAGTGGTTGAAGAAACGACGACGAATAAAAAGGAGAAGAGAGAGACGCCGGCGGCGGAGGAGGAGGAGGAGGAGCCGACGACGGAGGAGGTAGAGGAGTTCTATGCCATTTTGAGGAGGATAGATGTGGCTATGCGTTACTTGAAAGGGCGGGCACAGAAGAGGTCGACGCCGGAGGCGGGAGAGGTGGAGGAAAATAAAGAACTGAATTTGAATGAAATTCCTTCAGATTCTACTGATTAA TTTTGGTTGATAAGCTCTCCACGGATGTTTGTTTTCGTTCAACTTTATGCTAATTACTGTAAAAATCTTATTCCTATTATTATCATATTTCAATTAATAACCAAAATGTGTTTTCGGTTCTTCCTAATTATCCAGTTTTATTTCATCTTTTTTTCATATTCGCTTTTTAAGATCTCTAGCAATGAAA
AAAATGGCCGCTCCTACCAATCACCGCCGTTGATTTCAACATTTTCCGATCCGTATCTTGATTGATCTGATCTGACCTGATCGGCGCTACGATTTCAAATTGAAGAAGATAGAGTAAATTCGGATCGGAGATTTGAAATGGAGAGAGAAAAGAGGAAGAAAATGTTGCCGGAGGATAGCGGCGGAGTGGTTGAAGAAACGACGACGAATAAAAAGGAGAAGAGAGAGACGCCGGCGGCGGAGGAGGAGGAGGAGGAGCCGACGACGGAGGAGGTAGAGGAGTTCTATGCCATTTTGAGGAGGATAGATGTGGCTATGCGTTACTTGAAAGGGCGGGCACAGAAGAGGTCGACGCCGGAGGCGGGAGAGGTGGAGGAAAATAAAGAACTGAATTTGAATGAAATTCCTTCAGATTCTACTGATTAATTTTGGTTGATAAGCTCTCCACGGATGTTTGTTTTCGTTCAACTTTATGCTAATTACTGTAAAAATCTTATTCCTATTATTATCATATTTCAATTAATAACCAAAATGTGTTTTCGGTTCTTCCTAATTATCCAGTTTTATTTCATCTTTTTTTCATATTCGCTTTTTAAGATCTCTAGCAATGAAA
ATGGAGAGAGAAAAGAGGAAGAAAATGTTGCCGGAGGATAGCGGCGGAGTGGTTGAAGAAACGACGACGAATAAAAAGGAGAAGAGAGAGACGCCGGCGGCGGAGGAGGAGGAGGAGGAGCCGACGACGGAGGAGGTAGAGGAGTTCTATGCCATTTTGAGGAGGATAGATGTGGCTATGCGTTACTTGAAAGGGCGGGCACAGAAGAGGTCGACGCCGGAGGCGGGAGAGGTGGAGGAAAATAAAGAACTGAATTTGAATGAAATTCCTTCAGATTCTACTGATTAA
MEREKRKKMLPEDSGGVVEETTTNKKEKRETPAAEEEEEEPTTEEVEEFYAILRRIDVAMRYLKGRAQKRSTPEAGEVEENKELNLNEIPSDSTD
Homology
BLAST of Sed0019615 vs. NCBI nr
Match:
KGN64116.1 (hypothetical protein Csa_013670 [Cucumis sativus])
HSP 1 Score: 87.0 bits (214), Expect = 9.3e-14
Identity = 58/104 (55.77%), Postives = 73/104 (70.19%), Query Frame = 0
BLAST of Sed0019615 vs. NCBI nr
Match:
KAG6584363.1 (hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 84.3 bits (207), Expect = 6.0e-13
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Sed0019615 vs. ExPASy TrEMBL
Match:
A0A0A0LVR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042280 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 4.5e-14
Identity = 58/104 (55.77%), Postives = 73/104 (70.19%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KGN64116.1 9.3e-14 55.77 hypothetical protein Csa_013670 [Cucumis sativus] [more] KAG6584363.1 6.0e-13 55.24 hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0LVR0 4.5e-14 55.77 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042280 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
A A A A T G G C C G C T C C T A C C A A T C A C C G C C G T T G A T T T C A A C A T T T T C C G A T C C G T A T C T T G A T T G A T C T G A T C T G A C C T G A T C G G C G C T A C G A T T T C A A A T T G A A G A A G A T A G A G T A A A T T C G G A T C G G A G A T T T G A A A T G G A G A G A G A A A A G A G G A A G A A A A T G T T G C C G G A G G A T A G C G G C G G A G T G G T T G A A G A A A C G A C G A C G A A T A A A A A G G A G A A G A G A G A G A C G C C G G C G G C G G A G G A G G A G G A G G A G G A G C C G A C G A C G G A G G A G G T A G A G G A G T T C T A T G C C A T T T T G A G G A G G A T A G A T G T G G C T A T G C G T T A C T T G A A A G G G C G G G C A C A G A A G A G G T C G A C G C C G G A G G C G G G A G A G G T G G A G G A A A A T A A A G A A C T G A A T T T G A A T G A A A T T C C T T C A G A T T C T A C T G A T T A A T T T T G G T T G A T A A G C T C T C C A C G G A T G T T T G T T T T C G T T C A A C T T T A T G C T A A T T A C T G T A A A A A T C T T A T T C C T A T T A T T A T C A T A T T T C A A T T A A T A A C C A A A A T G T G T T T T C G G T T C T T C C T A A T T A T C C A G T T T T A T T T C A T C T T T T T T T C A T A T T C G C T T T T T A A G A T C T C T A G C A A T G A A A 50 100 150 200 250 300 350 400 450 500 550 600 Score = Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..86 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..95 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..46 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..35
Relationships
The following mRNA feature(s) are a part of this gene:
