Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGAAGAAAGCGGTGGGCAAGGCCCGCGCCGACCGATTGGTTGAATTAGAGGAAGAGATGCTCTATCTGAGGGAGGTCCCTGACAATATTCGATTTTTAGAACCTCGCCTGGACGAGATCGACAAAAAAGCCATTATGATTGATGCGGTAACTGGCCGCCTTGATGGGATTCCCATCCAAGAACTGATGATGAGGGTCGAGACCATAGAAGATAAAACCTCACGACTCGGGCTGTTCGAGCATGGGATGACTCGTCAGGCTCTGTCGTGA
mRNA sequence
ATGTCTGAGAAGAAAGCGGTGGGCAAGGCCCGCGCCGACCGATTGGTTGAATTAGAGGAAGAGATGCTCTATCTGAGGGAGGTCCCTGACAATATTCGATTTTTAGAACCTCGCCTGGACGAGATCGACAAAAAAGCCATTATGATTGATGCGGTAACTGGCCGCCTTGATGGGATTCCCATCCAAGAACTGATGATGAGGGTCGAGACCATAGAAGATAAAACCTCACGACTCGGGCTGTTCGAGCATGGGATGACTCGTCAGGCTCTGTCGTGA
Coding sequence (CDS)
ATGTCTGAGAAGAAAGCGGTGGGCAAGGCCCGCGCCGACCGATTGGTTGAATTAGAGGAAGAGATGCTCTATCTGAGGGAGGTCCCTGACAATATTCGATTTTTAGAACCTCGCCTGGACGAGATCGACAAAAAAGCCATTATGATTGATGCGGTAACTGGCCGCCTTGATGGGATTCCCATCCAAGAACTGATGATGAGGGTCGAGACCATAGAAGATAAAACCTCACGACTCGGGCTGTTCGAGCATGGGATGACTCGTCAGGCTCTGTCGTGA
Protein sequence
MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIPIQELMMRVETIEDKTSRLGLFEHGMTRQALS
Homology
BLAST of Sed0009823 vs. NCBI nr
Match:
KAA0062476.1 (uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa] >TYK27406.1 uncharacterized protein E5676_scaffold325G00940 [Cucumis melo var. makuwa])
HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS K +GK +ADRLVEL+E+M YL EV D+I FL+ RL+EI +KA IDAVT RLDG+P
Sbjct: 1 MSTTKQLGKHQADRLVELKEQMHYLVEVSDSIHFLKSRLEEIYEKADAIDAVTSRLDGLP 60
Query: 61 IQELMMRVETIEDKTSRLGLFEHG 85
IQEL+ RV+T+E K R G +EHG
Sbjct: 61 IQELLTRVDTLETKVVRTGNYEHG 84
BLAST of Sed0009823 vs. NCBI nr
Match:
KAA0025805.1 (senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] >TYK09651.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa])
HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS KA+ DRLVELEE+MLYL EVPD+IRFLE RL+EI +K MIDAV GR++G+P
Sbjct: 1 MSSANPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLEEIAEKTNMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTSRLGLFEH 84
IQEL+ RV+T+E R G EH
Sbjct: 61 IQELLARVDTLEGTVGRTGSHEH 83
BLAST of Sed0009823 vs. NCBI nr
Match:
KAA0032146.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS GKA+ DRLVE+EE+MLYL EVPD+IR+LE R+DEI +KA MIDAV GR++G+P
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTS 77
IQEL+ RV+T+E+ T+
Sbjct: 61 IQELLARVDTLEENTN 76
BLAST of Sed0009823 vs. NCBI nr
Match:
TYK14391.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS GKA+ DRLVE+EE+MLYL EVPD+IR+LE R+DEI +KA MIDAV GR++G+P
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTS 77
IQEL+ RV+T+E+ T+
Sbjct: 61 IQELLARVDTLEENTN 76
BLAST of Sed0009823 vs. NCBI nr
Match:
XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])
HSP 1 Score: 99.0 bits (245), Expect = 2.3e-17
Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS K +GK+ DRLVE+EE +L+LRE+PDN+R++E RLDEI KA ID V R+DG+
Sbjct: 1 MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60
Query: 61 IQELMMRVETIEDKTSRLGLFEHG 85
I+ELM+RVET+EDK R E G
Sbjct: 61 IRELMLRVETLEDKVKRTDNLERG 84
BLAST of Sed0009823 vs. ExPASy TrEMBL
Match:
A0A5D3DUL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00940 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 6.4e-18
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS K +GK +ADRLVEL+E+M YL EV D+I FL+ RL+EI +KA IDAVT RLDG+P
Sbjct: 1 MSTTKQLGKHQADRLVELKEQMHYLVEVSDSIHFLKSRLEEIYEKADAIDAVTSRLDGLP 60
Query: 61 IQELMMRVETIEDKTSRLGLFEHG 85
IQEL+ RV+T+E K R G +EHG
Sbjct: 61 IQELLTRVDTLETKVVRTGNYEHG 84
BLAST of Sed0009823 vs. ExPASy TrEMBL
Match:
A0A5D3CCT9 (Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00510 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS KA+ DRLVELEE+MLYL EVPD+IRFLE RL+EI +K MIDAV GR++G+P
Sbjct: 1 MSSANPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLEEIAEKTNMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTSRLGLFEH 84
IQEL+ RV+T+E R G EH
Sbjct: 61 IQELLARVDTLEGTVGRTGSHEH 83
BLAST of Sed0009823 vs. ExPASy TrEMBL
Match:
A0A5D3CRH9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00330 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS GKA+ DRLVE+EE+MLYL EVPD+IR+LE R+DEI +KA MIDAV GR++G+P
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTS 77
IQEL+ RV+T+E+ T+
Sbjct: 61 IQELLARVDTLEENTN 76
BLAST of Sed0009823 vs. ExPASy TrEMBL
Match:
A0A5A7SQ54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00580 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS GKA+ DRLVE+EE+MLYL EVPD+IR+LE R+DEI +KA MIDAV GR++G+P
Sbjct: 1 MSSSNPSGKAQRDRLVEIEEQMLYLVEVPDSIRYLESRVDEISEKANMIDAVAGRVEGLP 60
Query: 61 IQELMMRVETIEDKTS 77
IQEL+ RV+T+E+ T+
Sbjct: 61 IQELLARVDTLEENTN 76
BLAST of Sed0009823 vs. ExPASy TrEMBL
Match:
A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 0
Query: 1 MSEKKAVGKARADRLVELEEEMLYLREVPDNIRFLEPRLDEIDKKAIMIDAVTGRLDGIP 60
MS K +GK+ DRLVE+EE +L+LRE+PDN+R++E RLDEI KA ID V R+DG+
Sbjct: 1 MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60
Query: 61 IQELMMRVETIEDKTSRLGLFEHG 85
I+ELM+RVET+EDK R E G
Sbjct: 61 IRELMLRVETLEDKVKRTDNLERG 84
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062476.1 | 1.3e-17 | 61.90 | uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa] >TYK2... | [more] |
| KAA0025805.1 | 1.7e-17 | 61.45 | senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] >TYK09651... | [more] |
| KAA0032146.1 | 2.3e-17 | 63.16 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| TYK14391.1 | 2.3e-17 | 63.16 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| XP_022155185.1 | 2.3e-17 | 57.14 | uncharacterized protein LOC111022320 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DUL1 | 6.4e-18 | 61.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CCT9 | 8.4e-18 | 61.45 | Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A5D3CRH9 | 1.1e-17 | 63.16 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5A7SQ54 | 1.1e-17 | 63.16 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A6J1DLQ6 | 1.1e-17 | 57.14 | uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
