Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAGATCCTTGGAATGTGAAATGGAAACTCTTAGTCTCTTATTGTGAACTGTCTCTCACACAGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTAAATTGAAATTTGCTTTGATGCTGTGAACTGTGGTGTGGTTTTTATAGTCATTTTTCTTAGTTGATTCTTGAGTGACTTGGTTTCAGGTTATTCGAGCTCGGTTGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTCTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTTTAAGATATGAATGGGATTTAT
mRNA sequence
ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAGATCCTTGGAATGTGAAATGGAAACTCTTAGTCTCTTATTGTGAACTGTCTCTCACACAGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTTATTCGAGCTCGGTTGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTCTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTTTAAGATATGAATGGGATTTAT
Coding sequence (CDS)
ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAG
Protein sequence
MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLVQIFGLSLLH
Homology
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match:
A0A1S3CS94 (folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 4.2e-18
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query: 1 MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 1 MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 50
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match:
A0A5D3CM20 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001670 PE=3 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 217
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match:
A0A5D3BGA3 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00150 PE=3 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 271
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match:
A0A1S3B2N4 (folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485089 PE=3 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 3.8e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 209
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match:
A0A5A7SHT3 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002040 PE=3 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 3.8e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 217
BLAST of Pay0005798 vs. NCBI nr
Match:
XP_008466887.1 (PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo])
HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query: 1 MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 1 MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 50
BLAST of Pay0005798 vs. NCBI nr
Match:
TYK12585.1 (folate transporter 1 [Cucumis melo var. makuwa])
HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 217
BLAST of Pay0005798 vs. NCBI nr
Match:
TYJ98104.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])
HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 271
BLAST of Pay0005798 vs. NCBI nr
Match:
XP_008440771.1 (PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016899232.1 PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 76.6 bits (187), Expect = 7.9e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 209
BLAST of Pay0005798 vs. NCBI nr
Match:
KAA0025710.1 (folate transporter 1 [Cucumis melo var. makuwa])
HSP 1 Score: 76.6 bits (187), Expect = 7.9e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 10 LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 217
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3CS94 | 4.2e-18 | 100.00 | folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213... | [more] |
| A0A5D3CM20 | 2.9e-11 | 95.12 | Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255... | [more] |
| A0A5D3BGA3 | 2.9e-11 | 95.12 | Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| A0A1S3B2N4 | 3.8e-11 | 92.68 | folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... | [more] |
| A0A5A7SHT3 | 3.8e-11 | 92.68 | Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008466887.1 | 8.7e-18 | 100.00 | PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo] | [more] |
| TYK12585.1 | 6.1e-11 | 95.12 | folate transporter 1 [Cucumis melo var. makuwa] | [more] |
| TYJ98104.1 | 6.1e-11 | 95.12 | putative receptor-like protein kinase [Cucumis melo var. makuwa] | [more] |
| XP_008440771.1 | 7.9e-11 | 92.68 | PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016... | [more] |
| KAA0025710.1 | 7.9e-11 | 92.68 | folate transporter 1 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
