Pay0005798 (gene) Melon (Payzawat) v1

Overview
NamePay0005798
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionfolate transporter 1, chloroplastic-like
Locationchr09: 13237696 .. 13238372 (+)
RNA-Seq ExpressionPay0005798
SyntenyPay0005798
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAGATCCTTGGAATGTGAAATGGAAACTCTTAGTCTCTTATTGTGAACTGTCTCTCACACAGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTAAATTGAAATTTGCTTTGATGCTGTGAACTGTGGTGTGGTTTTTATAGTCATTTTTCTTAGTTGATTCTTGAGTGACTTGGTTTCAGGTTATTCGAGCTCGGTTGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTCTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTTTAAGATATGAATGGGATTTAT

mRNA sequence

ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAGATCCTTGGAATGTGAAATGGAAACTCTTAGTCTCTTATTGTGAACTGTCTCTCACACAGAATTCCGGTGATTATGCTGTTCTTGGAGGAACTTCTAAAATTGCTGCCATGCTTTTGACATACCCATTTCAAGTTATTCGAGCTCGGTTGCTACAGTTCAGGAAGAGGAATGTCAAGCCCTTGCTGCATTTGGTGCCTGTTTCCAATATTAATAATTGTTTGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTCTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTTTAAGATATGAATGGGATTTAT

Coding sequence (CDS)

ATGGGAACAATTCATAGATGTGTTTTGTTGCTACAACAGGTTTCTCATGGTGCCATTCAATTTACAGTCTATGAAGAACTCCGTAAAGTTATTGCCAACTCAAGGTCTAAAGGGACCAGAGTCGATGCTCAAAGTTCCGGGGAATTACTGGTACAAATTTTTGGCTTGAGTTTACTCCATTAG

Protein sequence

MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLVQIFGLSLLH
Homology
[Close]
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match: A0A1S3CS94 (folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-18
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
          MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 50

[Close]
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match: A0A5D3CM20 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001670 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 217

[Close]
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match: A0A5D3BGA3 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00150 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 271

[Close]
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match: A0A1S3B2N4 (folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485089 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 209

[Close]
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match: A0A5A7SHT3 (Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002040 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 217

[Close]
BLAST of Pay0005798 vs. NCBI nr
Match: XP_008466887.1 (PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
          MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 1  MGTIHRCVLLLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 50

[Close]
BLAST of Pay0005798 vs. NCBI nr
Match: TYK12585.1 (folate transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 217

[Close]
BLAST of Pay0005798 vs. NCBI nr
Match: TYJ98104.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL
Sbjct: 231 LMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 271

[Close]
BLAST of Pay0005798 vs. NCBI nr
Match: XP_008440771.1 (PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016899232.1 PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 76.6 bits (187), Expect = 7.9e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 169 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 209

[Close]
BLAST of Pay0005798 vs. NCBI nr
Match: KAA0025710.1 (folate transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 7.9e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 10  LLQQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELL 51
           L+ QVSHGAIQFTVYEELRK+IANSRSKGTRVDAQSSGELL
Sbjct: 177 LMLQVSHGAIQFTVYEELRKIIANSRSKGTRVDAQSSGELL 217

The following BLAST results are available for this feature:
BLAST of Pay0005798 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0005798 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CS944.2e-18100.00folate transporter 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103504213... [more]
A0A5D3CM202.9e-1195.12Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255... [more]
A0A5D3BGA32.9e-1195.12Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3B2N43.8e-1192.68folate transporter 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5A7SHT33.8e-1192.68Folate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253... [more]
BLAST of Pay0005798 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466887.18.7e-18100.00PREDICTED: folate transporter 1, chloroplastic-like [Cucumis melo][more]
TYK12585.16.1e-1195.12folate transporter 1 [Cucumis melo var. makuwa][more]
TYJ98104.16.1e-1195.12putative receptor-like protein kinase [Cucumis melo var. makuwa][more]
XP_008440771.17.9e-1192.68PREDICTED: folate transporter 1, chloroplastic isoform X1 [Cucumis melo] >XP_016... [more]
KAA0025710.17.9e-1192.68folate transporter 1 [Cucumis melo var. makuwa][more]
BLAST of Pay0005798 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0005798.1Pay0005798.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006862 nucleotide transport
biological_process GO:0016310 phosphorylation
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0016301 kinase activity