Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA
mRNA sequence
ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA
Coding sequence (CDS)
ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA
Protein sequence
MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF
Homology
BLAST of PI0028493 vs. ExPASy TrEMBL
Match:
A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 3.9e-44
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0
Query: 1 MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
MDPITYERIRRR +RSCRGFRLTSRRLSVSKL+ KFGWLLRILNWWRRSIV+IKK GRSS
Sbjct: 1 MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60
Query: 61 KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
KGSSNSGAQA RLRSFRRSNSFYAEAIADCLDFIKT SSSSFSTPP STIPT TF
Sbjct: 61 KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKT---SSSSFSTPP-STIPTHTF 113
BLAST of PI0028493 vs. ExPASy TrEMBL
Match:
A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.8e-41
Identity = 102/117 (87.18%), Postives = 106/117 (90.60%), Query Frame = 0
Query: 1 MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
MDPITYERI RR++RSCRGFRLTSRRLSVSKLR KFGWLLRILN WRRSIVEIKKSG SS
Sbjct: 1 MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
Query: 61 KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
KGSSNS AQAA+LRSFRRSNSFYAEAIADCLDFIKT +SSFSTPP STIPT TF
Sbjct: 61 KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKT----TSSFSTPP-STIPTHTF 112
BLAST of PI0028493 vs. ExPASy TrEMBL
Match:
A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 0
Query: 1 MDPITYERI----RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS 60
M+PI+YERI RRR +S RGFRL SRR SVS+LR KF LLRILN WRRS IKK
Sbjct: 78 MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKM 137
Query: 61 GRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSS 104
RS + RLRSFRRSNSFYAEA+ADCLDFIKT++SSS S
Sbjct: 138 RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSSLS 181
BLAST of PI0028493 vs. ExPASy TrEMBL
Match:
A0A1Q3CYT7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 0
Query: 1 MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS---- 60
M ++Y R+ RR +GFRL SRR SV +LR +F +L R+L WR S + KS
Sbjct: 1 MAHVSYTRVGRRTCHETKGFRLNSRRFSVQRLRARFLYLFRLLRTWRSSCGQALKSLKRG 60
Query: 61 --------------GRSSKG-------SSNSG-AQAARLRSFRRSNSFYAEAIADCLDFI 102
RS + ++N G A+ RLRSF RSNSFY++AIADCL+FI
Sbjct: 61 FCRNYSVKRNFCINNRSRRSISVMDVPTNNMGRAECDRLRSFGRSNSFYSDAIADCLEFI 120
BLAST of PI0028493 vs. ExPASy TrEMBL
Match:
A0A7N2M1R7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09
Identity = 54/117 (46.15%), Postives = 67/117 (57.26%), Query Frame = 0
Query: 10 RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWR----RSIVEIKK-------SGR 69
RR R RGFRL S+R SV +LR +F +L ++L+ WR +++ +KK SG
Sbjct: 15 RRLRCNGSRGFRLNSKRFSVQRLRARFIYLFKLLDRWRCSYGQALKSLKKGFGRNRRSGS 74
Query: 70 SSKGSSNSG---------------AQAARLRSFRRSNSFYAEAIADCLDFIKTSSSS 101
S K S+NS A RLRSF RSNSFYAEAIADCL+FIK SS S
Sbjct: 75 SIKRSNNSSTSTRCLVTKVPNLVQADHCRLRSFGRSNSFYAEAIADCLEFIKRSSLS 131
BLAST of PI0028493 vs. NCBI nr
Match:
KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 187.2 bits (474), Expect = 8.1e-44
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0
Query: 1 MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
MDPITYERIRRR +RSCRGFRLTSRRLSVSKL+ KFGWLLRILNWWRRSIV+IKK GRSS
Sbjct: 1 MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60
Query: 61 KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
KGSSNSGAQA RLRSFRRSNSFYAEAIADCLDFIKT SSSSFSTPP STIPT TF
Sbjct: 61 KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKT---SSSSFSTPP-STIPTHTF 113
BLAST of PI0028493 vs. NCBI nr
Match:
KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus])
HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41
Identity = 102/117 (87.18%), Postives = 106/117 (90.60%), Query Frame = 0
Query: 1 MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
MDPITYERI RR++RSCRGFRLTSRRLSVSKLR KFGWLLRILN WRRSIVEIKKSG SS
Sbjct: 1 MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
Query: 61 KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
KGSSNS AQAA+LRSFRRSNSFYAEAIADCLDFIKT +SSFSTPP STIPT TF
Sbjct: 61 KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKT----TSSFSTPP-STIPTHTF 112
BLAST of PI0028493 vs. NCBI nr
Match:
KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21
Identity = 72/123 (58.54%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 1 MDPITYERIRRRRK--RSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSI---VEIKK 60
M+PITY+RIRRR CRGF L SRR SVSKLR KF WLLRILN WRRS ++I K
Sbjct: 76 MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 135
Query: 61 SGRSSKGSSNSGAQA----------ARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFS 109
+ R + +++ A A RLRSFRRSNSFYAEAIADCLDFIK SS SS S
Sbjct: 136 ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 195
BLAST of PI0028493 vs. NCBI nr
Match:
KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21
Identity = 72/123 (58.54%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 1 MDPITYERIRRRRK--RSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSI---VEIKK 60
M+PITY+RIRRR CRGF L SRR SVSKLR KF WLLRILN WRRS ++I K
Sbjct: 1 MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 60
Query: 61 SGRSSKGSSNSGAQA----------ARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFS 109
+ R + +++ A A RLRSFRRSNSFYAEAIADCLDFIK SS SS S
Sbjct: 61 ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 120
BLAST of PI0028493 vs. NCBI nr
Match:
XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia])
HSP 1 Score: 104.8 bits (260), Expect = 5.3e-19
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 0
Query: 1 MDPITYERI----RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS 60
M+PI+YERI RRR +S RGFRL SRR SVS+LR KF LLRILN WRRS IKK
Sbjct: 78 MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKM 137
Query: 61 GRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSS 104
RS + RLRSFRRSNSFYAEA+ADCLDFIKT++SSS S
Sbjct: 138 RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSSLS 181
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UC85 | 3.9e-44 | 89.74 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0L3I7 | 1.8e-41 | 87.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1 | [more] |
| A0A6J1E0I4 | 2.6e-19 | 64.49 | uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
| A0A1Q3CYT7 | 2.4e-09 | 41.73 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4... | [more] |
| A0A7N2M1R7 | 3.1e-09 | 46.15 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0052904.1 | 8.1e-44 | 89.74 | hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK1135... | [more] |
| KAE8637405.1 | 3.8e-41 | 87.18 | hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical prote... | [more] |
| KAG6596289.1 | 4.3e-21 | 58.54 | hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7027838.1 | 4.3e-21 | 58.54 | hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022158286.1 | 5.3e-19 | 64.49 | uncharacterized protein LOC111024807 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
