PI0028493.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0028493.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 30803998 .. 30804351 (-)
Sequence length	354
RNA-Seq Expression	PI0028493.1
Synteny	PI0028493.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA

mRNA sequence

ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA

Coding sequence (CDS)

ATGGATCCTATCACATATGAGAGGATTAGGCGGCGGCGGAAGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTTGAAATTCGGGTGGCTGTTGCGTATCTTAAATTGGTGGCGCCGCTCCATTGTTGAGATTAAGAAGAGCGGAAGATCATCAAAAGGTTCTTCTAATTCAGGTGCGCAAGCTGCGAGGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCTCCTTCTCAACGCCTCCAGCTTCCACTATACCTACAACTACCTTCTAA

Protein sequence

MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF

Homology

[Close]

BLAST of PI0028493.1 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.9e-44
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
           MDPITYERIRRR +RSCRGFRLTSRRLSVSKL+ KFGWLLRILNWWRRSIV+IKK GRSS
Sbjct: 1   MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60

Query: 61  KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
           KGSSNSGAQA RLRSFRRSNSFYAEAIADCLDFIKT   SSSSFSTPP STIPT TF
Sbjct: 61  KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKT---SSSSFSTPP-STIPTHTF 113

[Close]

BLAST of PI0028493.1 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.8e-41
Identity = 102/117 (87.18%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
           MDPITYERI RR++RSCRGFRLTSRRLSVSKLR KFGWLLRILN WRRSIVEIKKSG SS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
           KGSSNS AQAA+LRSFRRSNSFYAEAIADCLDFIKT    +SSFSTPP STIPT TF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKT----TSSFSTPP-STIPTHTF 112

[Close]

BLAST of PI0028493.1 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MDPITYERI----RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS 60
           M+PI+YERI     RRR +S RGFRL SRR SVS+LR KF  LLRILN WRRS   IKK 
Sbjct: 78  MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKM 137

Query: 61  GRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSS 104
            RS    +       RLRSFRRSNSFYAEA+ADCLDFIKT++SSS S
Sbjct: 138 RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSSLS 181

[Close]

BLAST of PI0028493.1 vs. ExPASy TrEMBL
Match: A0A1Q3CYT7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 1   MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS---- 60
           M  ++Y R+ RR     +GFRL SRR SV +LR +F +L R+L  WR S  +  KS    
Sbjct: 1   MAHVSYTRVGRRTCHETKGFRLNSRRFSVQRLRARFLYLFRLLRTWRSSCGQALKSLKRG 60

Query: 61  --------------GRSSKG-------SSNSG-AQAARLRSFRRSNSFYAEAIADCLDFI 102
                          RS +        ++N G A+  RLRSF RSNSFY++AIADCL+FI
Sbjct: 61  FCRNYSVKRNFCINNRSRRSISVMDVPTNNMGRAECDRLRSFGRSNSFYSDAIADCLEFI 120

[Close]

BLAST of PI0028493.1 vs. ExPASy TrEMBL
Match: A0A7N2M1R7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09
Identity = 54/117 (46.15%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 10  RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWR----RSIVEIKK-------SGR 69
           RR R    RGFRL S+R SV +LR +F +L ++L+ WR    +++  +KK       SG 
Sbjct: 15  RRLRCNGSRGFRLNSKRFSVQRLRARFIYLFKLLDRWRCSYGQALKSLKKGFGRNRRSGS 74

Query: 70  SSKGSSNSG---------------AQAARLRSFRRSNSFYAEAIADCLDFIKTSSSS 101
           S K S+NS                A   RLRSF RSNSFYAEAIADCL+FIK SS S
Sbjct: 75  SIKRSNNSSTSTRCLVTKVPNLVQADHCRLRSFGRSNSFYAEAIADCLEFIKRSSLS 131

[Close]

BLAST of PI0028493.1 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 8.1e-44
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
           MDPITYERIRRR +RSCRGFRLTSRRLSVSKL+ KFGWLLRILNWWRRSIV+IKK GRSS
Sbjct: 1   MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60

Query: 61  KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
           KGSSNSGAQA RLRSFRRSNSFYAEAIADCLDFIKT   SSSSFSTPP STIPT TF
Sbjct: 61  KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKT---SSSSFSTPP-STIPTHTF 113

[Close]

BLAST of PI0028493.1 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41
Identity = 102/117 (87.18%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MDPITYERIRRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKSGRSS 60
           MDPITYERI RR++RSCRGFRLTSRRLSVSKLR KFGWLLRILN WRRSIVEIKKSG SS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFSTPPASTIPTTTF 118
           KGSSNS AQAA+LRSFRRSNSFYAEAIADCLDFIKT    +SSFSTPP STIPT TF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKT----TSSFSTPP-STIPTHTF 112

[Close]

BLAST of PI0028493.1 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21
Identity = 72/123 (58.54%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MDPITYERIRRRRK--RSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSI---VEIKK 60
           M+PITY+RIRRR      CRGF L SRR SVSKLR KF WLLRILN WRRS    ++I K
Sbjct: 76  MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 135

Query: 61  SGRSSKGSSNSGAQA----------ARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFS 109
           + R  +  +++ A A           RLRSFRRSNSFYAEAIADCLDFIK SS SS   S
Sbjct: 136 ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 195

[Close]

BLAST of PI0028493.1 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21
Identity = 72/123 (58.54%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MDPITYERIRRRRK--RSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSI---VEIKK 60
           M+PITY+RIRRR      CRGF L SRR SVSKLR KF WLLRILN WRRS    ++I K
Sbjct: 1   MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 60

Query: 61  SGRSSKGSSNSGAQA----------ARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSSFS 109
           + R  +  +++ A A           RLRSFRRSNSFYAEAIADCLDFIK SS SS   S
Sbjct: 61  ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 120

[Close]

BLAST of PI0028493.1 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 5.3e-19
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MDPITYERI----RRRRKRSCRGFRLTSRRLSVSKLRLKFGWLLRILNWWRRSIVEIKKS 60
           M+PI+YERI     RRR +S RGFRL SRR SVS+LR KF  LLRILN WRRS   IKK 
Sbjct: 78  MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKM 137

Query: 61  GRSSKGSSNSGAQAARLRSFRRSNSFYAEAIADCLDFIKTSSSSSSS 104
            RS    +       RLRSFRRSNSFYAEA+ADCLDFIKT++SSS S
Sbjct: 138 RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSSLS 181

The following BLAST results are available for this feature:

BLAST of PI0028493.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0028493.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC85	3.9e-44	89.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L3I7	1.8e-41	87.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1	[more]
A0A6J1E0I4	2.6e-19	64.49	uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A1Q3CYT7	2.4e-09	41.73	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4...	[more]
A0A7N2M1R7	3.1e-09	46.15	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of PI0028493.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052904.1	8.1e-44	89.74	hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK1135...	[more]
KAE8637405.1	3.8e-41	87.18	hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical prote...	[more]
KAG6596289.1	4.3e-21	58.54	hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027838.1	4.3e-21	58.54	hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022158286.1	5.3e-19	64.49	uncharacterized protein LOC111024807 [Momordica charantia]	[more]

BLAST of PI0028493.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..117
None	No IPR available	PANTHER	PTHR34996:SF3	OS06G0327400 PROTEIN	coord: 62..105
None	No IPR available	PANTHER	PTHR34996:SF3	OS06G0327400 PROTEIN	coord: 2..54
None	No IPR available	PANTHER	PTHR34996	OS06G0327400 PROTEIN	coord: 62..105 coord: 2..54

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0028493	PI0028493	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028493.1-exon	PI0028493.1-exon-chr06:30803998..30804351	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0028493.1-cds	PI0028493.1-cds-chr06:30803998..30804351	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0028493.1	PI0028493.1-protein	polypeptide