Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTTTACAGTTATCCCTTTCACCCTAACTTGCAATGAACTAATCTTTCCAAACTTTCAATTCTTCCTAAATGACCCACCAAATGAAGTTGAGAAAGAACAAAATGAAGAAACAGAAGATGAGAGTGAAGGAGGTGATAAAGAAGAAGAAACTGTAAATGATGAGACAAGAATATTCATAACCTGAATGATGAAGAGGTAAATATATTCGTTTTCTTTTGAACTGAGGTAAATATATTATTGTTTAAGGTATATTGGCATCACCTATATAACATATAAGTTATATAAGTGATACTAATATACATCATAAAGTAATAAATTTGTTGATATTGATTTACTGATATTACAGATTAATGAAGAAGAAATTGAACAAGAAGAAAATGCAGAAGAGCTAGAGCAAGCAATCGAGAATATTGATAAGTTCATCAATAATGTAATATATATTTAGTTTACCTACAGTAATTTCATTTTGTTGTTTCCCTTGTTTTAATAAAATTTTCTACTTATTCATCAAAGAGGGAAAAAGAGAATGAAGAAAAACAAATGAATGAAGATGAAAAAGAAAGTGAAGTTTTAAAAGAAGCACATGGCACAATTGTAAGTAATTTAGTATACATCTTGATACATTTGATAAAGTAAATTAGATATATCATCTGACTTATTCACCTATTTTCATACTATTTTCATACATCATAAAGTAATAAATTTGTTGATATTGATTTACTGATACTATAGATTAATGAAAAAGAAATTGAACAAGAAGAAAATGCAAAAGAGCTAGAGCAAGCAATCAAGGATATTGATAAGTGCATCAACAATGTAATATACATTTAG
mRNA sequence
ATGCAGTTTACAGTTATCCCTTTCACCCTAACTTGCAATGAACTAATCTTTCCAAACTTTCAATTCTTCCTAAATGACCCACCAAATGAAGTTGAGAAAGAACAAAATGAAGAAACAGAAGATGAGAGTGAAGGAGGTGATAAAGAAGAAGAAACTATTAATGAAGAAGAAATTGAACAAGAAGAAAATGCAGAAGAGCTAGAGCAAGCAATCGAGAATATTGATAAGTTCATCAATAATAGGGAAAAAGAGAATGAAGAAAAACAAATGAATGAAGATGAAAAAGAAAGTGAAGTTTTAAAAGAAGCACATGGCACAATTATTAATGAAAAAGAAATTGAACAAGAAGAAAATGCAAAAGAGCTAGAGCAAGCAATCAAGGATATTGATAAGTGCATCAACAATGTAATATACATTTAG
Coding sequence (CDS)
ATGCAGTTTACAGTTATCCCTTTCACCCTAACTTGCAATGAACTAATCTTTCCAAACTTTCAATTCTTCCTAAATGACCCACCAAATGAAGTTGAGAAAGAACAAAATGAAGAAACAGAAGATGAGAGTGAAGGAGGTGATAAAGAAGAAGAAACTATTAATGAAGAAGAAATTGAACAAGAAGAAAATGCAGAAGAGCTAGAGCAAGCAATCGAGAATATTGATAAGTTCATCAATAATAGGGAAAAAGAGAATGAAGAAAAACAAATGAATGAAGATGAAAAAGAAAGTGAAGTTTTAAAAGAAGCACATGGCACAATTATTAATGAAAAAGAAATTGAACAAGAAGAAAATGCAAAAGAGCTAGAGCAAGCAATCAAGGATATTGATAAGTGCATCAACAATGTAATATACATTTAG
Protein sequence
MQFTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEEEIEQEENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLKEAHGTIINEKEIEQEENAKELEQAIKDIDKCINNVIYI
Homology
BLAST of PI0028307 vs. ExPASy TrEMBL
Match:
A0A5D3CVC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00060 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +ELI PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELISPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINNVIYI 140
INE+EIEQE+NA+ELEQAIK+IDK INNVIYI
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINNVIYI 263
BLAST of PI0028307 vs. ExPASy TrEMBL
Match:
A0A5D3CVR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00300 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. ExPASy TrEMBL
Match:
A0A5A7T6C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00010 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EE EDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEEIEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLKEA 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 H-----------GTIINEKEIEQEENAKELEQAIKDIDKCINN 136
H INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 HLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. ExPASy TrEMBL
Match:
A0A5D3B9P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00080 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. ExPASy TrEMBL
Match:
A0A5A7SM53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00980 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13
Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 117 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 176
Query: 63 -EIEQEEN-AEELEQAIE-----------NIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ +N E L+ +E NI IN R ++ Q + E + L
Sbjct: 177 KEIQEVKNDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 236
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA++LEQAIK+IDK INN
Sbjct: 237 RLEERMNIHNLDDAEINEEEIEQEQNAEKLEQAIKNIDKFINN 278
BLAST of PI0028307 vs. NCBI nr
Match:
TYK14894.1 (hypothetical protein E5676_scaffold1779G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 95.9 bits (237), Expect = 2.9e-16
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +ELI PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELISPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINNVIYI 140
INE+EIEQE+NA+ELEQAIK+IDK INNVIYI
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINNVIYI 263
BLAST of PI0028307 vs. NCBI nr
Match:
TYJ96590.1 (hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. NCBI nr
Match:
KAA0036929.1 (hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EE EDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEEIEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLKEA 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 H-----------GTIINEKEIEQEENAKELEQAIKDIDKCINN 136
H INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 HLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. NCBI nr
Match:
TYK15460.1 (hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa])
HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 98 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 157
Query: 63 -EIEQ------------EENAEELEQAIENIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ E E+ + + NI IN R ++ Q + E + L
Sbjct: 158 KEIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 217
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA+ELEQAIK+IDK INN
Sbjct: 218 RLEERMNIHNLDDAEINEEEIEQEQNAEELEQAIKNIDKFINN 259
BLAST of PI0028307 vs. NCBI nr
Match:
KAA0032264.1 (hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa])
HSP 1 Score: 85.9 bits (211), Expect = 3.0e-13
Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 0
Query: 3 FTVIPFTLTCNELIFPNFQFFLNDPPNEVEKEQNEETEDESEGGDKEEETINEE------ 62
FTVIPFT T +EL PNFQFFLND PNEVEKE++EETEDE++ GD EEET+N+E
Sbjct: 117 FTVIPFTPTSDELTSPNFQFFLNDAPNEVEKERSEETEDENDKGD-EEETVNDETKKSLR 176
Query: 63 -EIEQEEN-AEELEQAIE-----------NIDKFINNREKENEEKQMNEDEKESEVLK-- 122
EI++ +N E L+ +E NI IN R ++ Q + E + L
Sbjct: 177 KEIQEVKNDLESLKNTVENGQNEVLELLNNIITIINERMPTEKQSQGSYHENHAPTLSLQ 236
Query: 123 ---------EAHGTIINEKEIEQEENAKELEQAIKDIDKCINN 136
INE+EIEQE+NA++LEQAIK+IDK INN
Sbjct: 237 RLEERMNIHNLDDAEINEEEIEQEQNAEKLEQAIKNIDKFINN 278
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CVC6 | 1.4e-16 | 47.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CVR6 | 6.6e-14 | 46.01 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7T6C2 | 6.6e-14 | 46.01 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3B9P7 | 6.6e-14 | 46.01 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7SM53 | 1.5e-13 | 46.63 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK14894.1 | 2.9e-16 | 47.90 | hypothetical protein E5676_scaffold1779G00060 [Cucumis melo var. makuwa] | [more] |
| TYJ96590.1 | 1.4e-13 | 46.01 | hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa] | [more] |
| KAA0036929.1 | 1.4e-13 | 46.01 | hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa] | [more] |
| TYK15460.1 | 1.4e-13 | 46.01 | hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa] | [more] |
| KAA0032264.1 | 3.0e-13 | 46.63 | hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
