Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA
mRNA sequence
ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA
Coding sequence (CDS)
ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA
Protein sequence
MDLTLLRNDQPTAATEVVEVSDPTIHPIDPPPRASPILIIFEVDAPPPIPSPPPPALDTAQNVNDLHIKDKNHILNEVGETTSSAHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNKINQLQRPNAENLVTPASQEDINILRSELKELSANNAQLSAAISNLSTSVSSLTSLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRLGDPAPRQDN
Homology
BLAST of PI0024901 vs. ExPASy TrEMBL
Match:
A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 59/186 (31.72%), Postives = 95/186 (51.08%), Query Frame = 0
Query: 77 EVGETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDL 136
+ ET+SS + + S + +D+ + +GS V K D+FEQVL Q
Sbjct: 243 KASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT--------- 302
Query: 137 KNKINQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLT 196
IN ++ L+ E + + S+LK+L A++ A LS++VS+LT
Sbjct: 303 ---INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLT 362
Query: 197 SLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDP 256
+VI EM ++ + DKQF+ +EYT+A QR+P+P I P+++ +P + LG P
Sbjct: 363 CVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYP 411
BLAST of PI0024901 vs. ExPASy TrEMBL
Match:
A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 0
Query: 80 ETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNK 139
ET+SS + + S + +D+ + +GS V K D+FEQVL Q
Sbjct: 166 ETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT------------ 225
Query: 140 INQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLTSLV 199
IN ++ L+ E + + S+LK+L A++ A LS++VS+LT +V
Sbjct: 226 INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLTCVV 285
Query: 200 IAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDPAPR 256
I EM ++ + DKQF+ +EYT+A QR+P+P I P+++ +P + LG P P
Sbjct: 286 IMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPH 331
BLAST of PI0024901 vs. ExPASy TrEMBL
Match:
A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 3.5e-05
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 199 EMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRL-GDPAPRQDN 256
EM ++ R D++F+ MEYT+A VQRVP P+IP +L+ PFPP+ + G P PRQ++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201
BLAST of PI0024901 vs. NCBI nr
Match:
KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 73.2 bits (178), Expect = 3.7e-09
Identity = 59/186 (31.72%), Postives = 95/186 (51.08%), Query Frame = 0
Query: 77 EVGETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDL 136
+ ET+SS + + S + +D+ + +GS V K D+FEQVL Q
Sbjct: 243 KASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT--------- 302
Query: 137 KNKINQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLT 196
IN ++ L+ E + + S+LK+L A++ A LS++VS+LT
Sbjct: 303 ---INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLT 362
Query: 197 SLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDP 256
+VI EM ++ + DKQF+ +EYT+A QR+P+P I P+++ +P + LG P
Sbjct: 363 CVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYP 411
BLAST of PI0024901 vs. NCBI nr
Match:
TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])
HSP 1 Score: 72.8 bits (177), Expect = 4.9e-09
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 0
Query: 80 ETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNK 139
ET+SS + + S + +D+ + +GS V K D+FEQVL Q
Sbjct: 166 ETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT------------ 225
Query: 140 INQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLTSLV 199
IN ++ L+ E + + S+LK+L A++ A LS++VS+LT +V
Sbjct: 226 INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLTCVV 285
Query: 200 IAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDPAPR 256
I EM ++ + DKQF+ +EYT+A QR+P+P I P+++ +P + LG P P
Sbjct: 286 IMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPH 331
BLAST of PI0024901 vs. NCBI nr
Match:
TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])
HSP 1 Score: 58.9 bits (141), Expect = 7.3e-05
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 199 EMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRL-GDPAPRQDN 256
EM ++ R D++F+ MEYT+A VQRVP P+IP +L+ PFPP+ + G P PRQ++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VF20 | 1.8e-09 | 31.72 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3DYE2 | 2.4e-09 | 32.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CT45 | 3.5e-05 | 48.28 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0064129.1 | 3.7e-09 | 31.72 | uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa] | [more] |
| TYK28611.1 | 4.9e-09 | 32.24 | hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa] | [more] |
| TYK14602.1 | 7.3e-05 | 48.28 | hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
