PI0024901 (gene) Melon (PI 482460) v1

Overview
NamePI0024901
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 13834491 .. 13835258 (+)
RNA-Seq ExpressionPI0024901
SyntenyPI0024901
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

mRNA sequence

ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

Coding sequence (CDS)

ATGGATCTTACCCTACTTCGCAATGACCAGCCCACGGCCGCCACTGAGGTTGTTGAGGTTTCCGACCCCACCATCCACCCGATAGACCCTCCCCCGCGAGCCTCTCCCATTCTTATTATTTTTGAAGTGGACGCCCCACCACCCATCCCATCGCCACCACCACCTGCTTTGGATACCGCGCAAAACGTTAATGATCTACACATTAAGGACAAAAACCATATCCTTAATGAAGTTGGCGAAACAACTTCTTCGGCACATACCACCACCGCCCAACCCTCCACCGCGCCCGGAGATGACGAAGATTTGGGCGAACTATTAGGCTCCATTGTGTGTAAGCCAATGATTGATCATTTTGAACAAGTATTGGCTCACCAAGCGGACCAGGTGACGCAACTCCAAGATTTGAAGAATAAAATCAATCAGTTGCAACGCCCCAACGCCGAGAACCTTGTGACGCCCGCTTCTCAAGAAGACATAAATATCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAACGCTCAGCTCTCCGCCGCAATATCCAATCTCTCCACTTCCGTCTCCAGCCTCACATCCCTGGTCATTGCCCAATCTGAGATGATGCGGCAAATAGCTGCGCGGCATGACAAGCAGTTTCGCACGCAAATGGAATACACGTACGCAGCAGTTGTTCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTAAAGTACCCTTTCCACCACTCACGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

Protein sequence

MDLTLLRNDQPTAATEVVEVSDPTIHPIDPPPRASPILIIFEVDAPPPIPSPPPPALDTAQNVNDLHIKDKNHILNEVGETTSSAHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNKINQLQRPNAENLVTPASQEDINILRSELKELSANNAQLSAAISNLSTSVSSLTSLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRLGDPAPRQDN
Homology
BLAST of PI0024901 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 59/186 (31.72%), Postives = 95/186 (51.08%), Query Frame = 0

Query: 77  EVGETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDL 136
           +  ET+SS +     + S    + +D+ + +GS V K   D+FEQVL  Q          
Sbjct: 243 KASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT--------- 302

Query: 137 KNKINQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLT 196
              IN ++      L+     E + +  S+LK+L        A++ A    LS++VS+LT
Sbjct: 303 ---INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLT 362

Query: 197 SLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDP 256
            +VI   EM  ++  + DKQF+  +EYT+A   QR+P+P I P+++  +P +    LG P
Sbjct: 363 CVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYP 411

BLAST of PI0024901 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 0

Query: 80  ETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNK 139
           ET+SS +     + S    + +D+ + +GS V K   D+FEQVL  Q             
Sbjct: 166 ETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT------------ 225

Query: 140 INQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLTSLV 199
           IN ++      L+     E + +  S+LK+L        A++ A    LS++VS+LT +V
Sbjct: 226 INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLTCVV 285

Query: 200 IAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDPAPR 256
           I   EM  ++  + DKQF+  +EYT+A   QR+P+P I P+++  +P +    LG P P 
Sbjct: 286 IMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPH 331

BLAST of PI0024901 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.5e-05
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 199 EMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRL-GDPAPRQDN 256
           EM  ++  R D++F+  MEYT+A  VQRVP P+IP +L+ PFPP+ +  G P PRQ++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201

BLAST of PI0024901 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-09
Identity = 59/186 (31.72%), Postives = 95/186 (51.08%), Query Frame = 0

Query: 77  EVGETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDL 136
           +  ET+SS +     + S    + +D+ + +GS V K   D+FEQVL  Q          
Sbjct: 243 KASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT--------- 302

Query: 137 KNKINQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLT 196
              IN ++      L+     E + +  S+LK+L        A++ A    LS++VS+LT
Sbjct: 303 ---INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLT 362

Query: 197 SLVIAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDP 256
            +VI   EM  ++  + DKQF+  +EYT+A   QR+P+P I P+++  +P +    LG P
Sbjct: 363 CVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYP 411

BLAST of PI0024901 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-09
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 0

Query: 80  ETTSS-AHTTTAQPSTAPGDDEDLGELLGSIVCKPMIDHFEQVLAHQADQVTQLQDLKNK 139
           ET+SS +     + S    + +D+ + +GS V K   D+FEQVL  Q             
Sbjct: 166 ETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQT------------ 225

Query: 140 INQLQRPNAENLVTPASQEDINILRSELKELSANN----AQLSAAISNLSTSVSSLTSLV 199
           IN ++      L+     E + +  S+LK+L        A++ A    LS++VS+LT +V
Sbjct: 226 INSMKHDAMTTLM-----EKVQVENSKLKQLLTEQQKQVAKIMANQDQLSSTVSNLTCVV 285

Query: 200 IAQSEMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPL--TRLGDPAPR 256
           I   EM  ++  + DKQF+  +EYT+A   QR+P+P I P+++  +P +    LG P P 
Sbjct: 286 IMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPH 331

BLAST of PI0024901 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-05
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 199 EMMRQIAARHDKQFRTQMEYTYAAVVQRVPAPIIPPDLKVPFPPLTRL-GDPAPRQDN 256
           EM  ++  R D++F+  MEYT+A  VQRVP P+IP +L+ PFPP+ +  G P PRQ++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VF201.8e-0931.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DYE22.4e-0932.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CT453.5e-0548.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0064129.13.7e-0931.72uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa][more]
TYK28611.14.9e-0932.24hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa][more]
TYK14602.17.3e-0548.28hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024901.1PI0024901.1mRNA