Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACCGTGAAAGAAGTTTGGGATGCACTGCAAAAGAAGTATGACGTCGAAGAAGTTGGATCCAAGAAATATGCGATGAGTCGATTCTTACAGTACCAGATGACTGATGACAGATCAGTGGAGGCCCAATCACACGAGTTGCAAAAAATTGCTCACGAAATAAGCAATGAAGGTATGCCACTTAATGAGCAGTTTCAAGTTGCTGTTATTATTGACAAATTACCTTCACTATGGAAGAACTTTAAGAATACTCTAAGGCATAAGAGAAAACAGTTCTCCCTGGAGAGTCTGATCACTCGATTGAGAATTGAGTAG
mRNA sequence
ATGTCCACCGTGAAAGAAGTTTGGGATGCACTGCAAAAGAAGTATGACGTCGAAGAAGTTGGATCCAAGAAATATGCGATGAGTCGATTCTTACAGTACCAGATGACTGATGACAGATCAGTGGAGGCCCAATCACACGAGTTGCAAAAAATTGCTCACGAAATAAGCAATGAAGGTATGCCACTTAATGAGCAGTTTCAAGTTGCTGTTATTATTGACAAATTACCTTCACTATGGAAGAACTTTAAGAATACTCTAAGGCATAAGAGAAAACAGTTCTCCCTGGAGAGTCTGATCACTCGATTGAGAATTGAGTAG
Coding sequence (CDS)
ATGTCCACCGTGAAAGAAGTTTGGGATGCACTGCAAAAGAAGTATGACGTCGAAGAAGTTGGATCCAAGAAATATGCGATGAGTCGATTCTTACAGTACCAGATGACTGATGACAGATCAGTGGAGGCCCAATCACACGAGTTGCAAAAAATTGCTCACGAAATAAGCAATGAAGGTATGCCACTTAATGAGCAGTTTCAAGTTGCTGTTATTATTGACAAATTACCTTCACTATGGAAGAACTTTAAGAATACTCTAAGGCATAAGAGAAAACAGTTCTCCCTGGAGAGTCTGATCACTCGATTGAGAATTGAGTAG
Protein sequence
MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE
Homology
BLAST of PI0022428 vs. ExPASy TrEMBL
Match:
A0A5A7UYY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00440 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41
Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDALQKKYD EE GSKKYA+SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGM
Sbjct: 94 MTTAKEVWDALQKKYDTEEAGSKKYAVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGM 153
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 154 PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 198
BLAST of PI0022428 vs. ExPASy TrEMBL
Match:
A0A5D3BDS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00230 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 84/105 (80.00%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T K+VW+ALQKKYD EE GSKKYA+SR+L+YQMTDDRSVEAQSHE+QKIAHEI NEGM
Sbjct: 90 MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV +IIDKLP LWK+FKNTLRHK K+FSLE+LITRL+IE
Sbjct: 150 PLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLKIE 194
BLAST of PI0022428 vs. ExPASy TrEMBL
Match:
A0A5A7SXC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00540 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 3.1e-40
Identity = 87/105 (82.86%), Postives = 99/105 (94.29%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDALQKKYD+EEVGSKKY +SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGM
Sbjct: 30 MTTAKEVWDALQKKYDIEEVGSKKYNVSRYLKYQMTDDKSVEAQSHEIQKIAHEIISEGM 89
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 90 PLDDQFQV-VIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 133
BLAST of PI0022428 vs. ExPASy TrEMBL
Match:
A0A5D3DC59 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00340 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 84/105 (80.00%), Postives = 97/105 (92.38%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDALQKKYD +E SKKYA+SR+L+YQMTDD+SVE QSHE+QKIAHEI +EGM
Sbjct: 94 MTTGKEVWDALQKKYDTKEARSKKYAVSRYLRYQMTDDKSVETQSHEIQKIAHEIISEGM 153
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQVAVIIDKLP LWK+FKNTLRHK K+FSLESLITRL+IE
Sbjct: 154 PLDDQFQVAVIIDKLPQLWKDFKNTLRHKTKEFSLESLITRLKIE 198
BLAST of PI0022428 vs. ExPASy TrEMBL
Match:
A0A5D3BV12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00700 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 85/105 (80.95%), Postives = 97/105 (92.38%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDA QKKYD EE GSKKYA++ +L+YQ+T+DRSVEAQSHE+QKIAHEI +EGM
Sbjct: 94 MTTAKEVWDAQQKKYDTEETGSKKYAVNPYLRYQITNDRSVEAQSHEIQKIAHEIISEGM 153
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQVAVIIDKLPSLWK+FKNTLRHK K FSLESLITRLRIE
Sbjct: 154 PLDDQFQVAVIIDKLPSLWKDFKNTLRHKTKVFSLESLITRLRIE 198
BLAST of PI0022428 vs. NCBI nr
Match:
KAA0060458.1 (uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa] >TYK18543.1 uncharacterized protein E5676_scaffold119G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDALQKKYD EE GSKKYA+SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGM
Sbjct: 94 MTTAKEVWDALQKKYDTEEAGSKKYAVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGM 153
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 154 PLDDQFQVVVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 198
BLAST of PI0022428 vs. NCBI nr
Match:
TYJ98000.1 (hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40
Identity = 84/105 (80.00%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T K+VW+ALQKKYD EE GSKKYA+SR+L+YQMTDDRSVEAQSHE+QKIAHEI NEGM
Sbjct: 90 MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGM 149
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV +IIDKLP LWK+FKNTLRHK K+FSLE+LITRL+IE
Sbjct: 150 PLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLKIE 194
BLAST of PI0022428 vs. NCBI nr
Match:
KAA0035842.1 (uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa] >TYK30290.1 uncharacterized protein E5676_scaffold344G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 6.4e-40
Identity = 87/105 (82.86%), Postives = 99/105 (94.29%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M+T KEVWDALQKKYD+EEVGSKKY +SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGM
Sbjct: 30 MTTAKEVWDALQKKYDIEEVGSKKYNVSRYLKYQMTDDKSVEAQSHEIQKIAHEIISEGM 89
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 90 PLDDQFQV-VIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 133
BLAST of PI0022428 vs. NCBI nr
Match:
XP_038883503.1 (uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida])
HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M T KEVWDALQKKYD EE SKKYA+S +L++QMTD++SVEAQSHELQKIAHEI EGM
Sbjct: 1039 MKTAKEVWDALQKKYDTEEARSKKYAVSHYLKFQMTDEKSVEAQSHELQKIAHEIITEGM 1098
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL+EQFQ+AVIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 1099 PLDEQFQIAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 1143
BLAST of PI0022428 vs. NCBI nr
Match:
XP_038883500.1 (uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida])
HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 0
Query: 1 MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGM 60
M T KEVWDALQKKYD EE SKKYA+S +L++QMTD++SVEAQSHELQKIAHEI EGM
Sbjct: 1195 MKTAKEVWDALQKKYDTEEARSKKYAVSHYLKFQMTDEKSVEAQSHELQKIAHEIITEGM 1254
Query: 61 PLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE 106
PL+EQFQ+AVIIDKLP LWK+FKNTLRHK K+FSLESLITRLRIE
Sbjct: 1255 PLDEQFQIAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIE 1299
BLAST of PI0022428 vs. TAIR 10
Match:
AT4G00980.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 0
Query: 5 KEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNE 64
KE+WD L+ Y +E SK+ + ++++++M ++R + Q KIA I + GM L+E
Sbjct: 284 KELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDE 343
Query: 65 QFQVAVIIDKLPSLWKNF 83
F V+ II K P W+ F
Sbjct: 344 AFHVSTIISKFPPSWRGF 361
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UYY4 | 1.6e-41 | 82.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BDS3 | 1.1e-40 | 80.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SXC2 | 3.1e-40 | 82.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3DC59 | 1.5e-39 | 80.00 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v... | [more] |
A0A5D3BV12 | 1.5e-39 | 80.95 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0060458.1 | 3.4e-41 | 82.86 | uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa] >TYK1... | [more] |
TYJ98000.1 | 2.2e-40 | 80.00 | hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa] | [more] |
KAA0035842.1 | 6.4e-40 | 82.86 | uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa] >TYK30... | [more] |
XP_038883503.1 | 1.9e-39 | 80.95 | uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida] | [more] |
XP_038883500.1 | 1.9e-39 | 80.95 | uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT4G00980.1 | 3.6e-09 | 35.90 | zinc knuckle (CCHC-type) family protein | [more] |