Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACACCTAAAACCCCAAATCCCCCCTCTTCAAACTTCATCCTCAAAACCCAAACAAATTCCCAAAATCCCTCTCAAATTCAAAAACTTCTTTAAATTAAATAAAAAGCTTCTTCATTTCCAAATCCCATGGCCAAAATTTGCCTTCTTTTTTGCCTCGTTGTGGCCCAGATCTTGCTAATTCAAGCAATGACTTCCATTGCTACAACAACAGATCTCCCTCTGTCGGCGGCGCCGGAGCCATCAGAGAAGGGGACCAGAGAAGGATCTGAAGTGGCGGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCATGGGGATAAGTCGGTGGCTGGCGGGGGAGTCATCATCGGTGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGCTTGATTCGGTTCATTGAGACTGATCCTAATTTCTAGTCTTTTTTTTTTTTTTTTCTTACACAAATCTTATATATAAATATATTCTTTTGATT
mRNA sequence
TAACACCTAAAACCCCAAATCCCCCCTCTTCAAACTTCATCCTCAAAACCCAAACAAATTCCCAAAATCCCTCTCAAATTCAAAAACTTCTTTAAATTAAATAAAAAGCTTCTTCATTTCCAAATCCCATGGCCAAAATTTGCCTTCTTTTTTGCCTCGTTGTGGCCCAGATCTTGCTAATTCAAGCAATGACTTCCATTGCTACAACAACAGATCTCCCTCTGTCGGCGGCGCCGGAGCCATCAGAGAAGGGGACCAGAGAAGGATCTGAAGTGGCGGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCATGGGGATAAGTCGGTGGCTGGCGGGGGAGTCATCATCGGTGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGCTTGATTCGGTTCATTGAGACTGATCCTAATTTCTAGTCTTTTTTTTTTTTTTTTCTTACACAAATCTTATATATAAATATATTCTTTTGATT
Coding sequence (CDS)
ATGGCCAAAATTTGCCTTCTTTTTTGCCTCGTTGTGGCCCAGATCTTGCTAATTCAAGCAATGACTTCCATTGCTACAACAACAGATCTCCCTCTGTCGGCGGCGCCGGAGCCATCAGAGAAGGGGACCAGAGAAGGATCTGAAGTGGCGGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCACCATGGGGATAAGTCGGTGGCTGGCGGGGGAGTCATCATCGGTGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGCTTGATTCGGTTCATTGA
Protein sequence
MAKICLLFCLVVAQILLIQAMTSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH
Homology
BLAST of PI0021480 vs. ExPASy TrEMBL
Match:
A0A5D3C590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003890 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 1.0e-43
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAMTSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLGK 60
MAK CLLFCL+VA+ILLIQAMTSIATTTDLPLSAAPEP+EKGTREGS+VAEAPEIRRLGK
Sbjct: 1 MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGK 60
Query: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH 103
HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+DSVH
Sbjct: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 102
BLAST of PI0021480 vs. ExPASy TrEMBL
Match:
A0A0A0K3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 6.7e-40
Identity = 91/103 (88.35%), Postives = 98/103 (95.15%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAM-TSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLG 60
MAKICLLFCL+V +I LIQA+ TSIATTT+LPLS APE SEKGTREGSEVAEAPEIRRLG
Sbjct: 1 MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60
Query: 61 KHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH 103
KHHGDKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+DSVH
Sbjct: 61 KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 103
BLAST of PI0021480 vs. ExPASy TrEMBL
Match:
A0A2N9IXN3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56997 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 0
Query: 7 LFCLVVAQILLIQAMTS-----------------------IATTTDLPLSAAPEPSEKGT 66
LFCL++A+IL++QAM +A D P+S+ E E +
Sbjct: 6 LFCLILAEILVVQAMAEKSEGSELNPFGLKAQNKNGALGVVARVADQPVSSIAESPE--S 65
Query: 67 REGSEVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGL 99
+E S+VAEAP IRR+GKHH DKS+AGGGVIIGGL TAIFA VFCYIRVTRKRDG+
Sbjct: 66 KEYSDVAEAPVIRRMGKHHSDKSLAGGGVIIGGLATAIFAVVFCYIRVTRKRDGV 118
BLAST of PI0021480 vs. ExPASy TrEMBL
Match:
A0A7N2R9A0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 9.4e-18
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 7 LFC--LVVAQILLIQAMTS-----------------------IATTTDLPLSAAPEPSEK 66
LFC +++A+IL++QAM +A D P+S+ S +
Sbjct: 6 LFCFMVILAEILVVQAMAGKSEGSEPNPFGLKAQNKVGTLRVVARLADQPVSSV-AGSPE 65
Query: 67 GTREGSEVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR 96
G +E S VAEAPEIRRLGKHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR
Sbjct: 66 GNKEYSNVAEAPEIRRLGKHHSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR 118
BLAST of PI0021480 vs. ExPASy TrEMBL
Match:
A0A2R6QCD3 (Actin cytoskeleton-regulatory complex protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19050 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17
Identity = 62/101 (61.39%), Postives = 66/101 (65.35%), Query Frame = 0
Query: 6 LLFCLVVAQILLIQAMT---------SIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIR 65
LL CLV+A ILL+QAM T D P S S GS VAEAPEI
Sbjct: 5 LLTCLVLAHILLVQAMAIRSDPRKILESHTIADPPASTGSVESASDGETGSSVAEAPEIG 64
Query: 66 RLGKHH-GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 97
RLGKHH DKSVAGGGVIIGGL TAIFAAV+CYIRVTR+RD
Sbjct: 65 RLGKHHSSDKSVAGGGVIIGGLATAIFAAVYCYIRVTRRRD 105
BLAST of PI0021480 vs. NCBI nr
Match:
KAA0031619.1 (hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK07071.1 hypothetical protein E5676_scaffold13G003890 [Cucumis melo var. makuwa])
HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAMTSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLGK 60
MAK CLLFCL+VA+ILLIQAMTSIATTTDLPLSAAPEP+EKGTREGS+VAEAPEIRRLGK
Sbjct: 1 MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGK 60
Query: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH 103
HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+DSVH
Sbjct: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH 102
BLAST of PI0021480 vs. NCBI nr
Match:
KAE8645753.1 (hypothetical protein Csa_020263 [Cucumis sativus])
HSP 1 Score: 148.7 bits (374), Expect = 2.8e-32
Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAM-TSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLG 60
MAKICLLFCL+V +I LIQA+ TSIATTT+LPLS APE SEKGTREGSEVAEAPEIRRLG
Sbjct: 1 MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60
Query: 61 KHHGDKSVAGGGVIIGGLVTAIFAAVFCYIR 91
KHHGDKS+AGGGVIIGGLVTA+FAAVFCYIR
Sbjct: 61 KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIR 91
BLAST of PI0021480 vs. NCBI nr
Match:
KAG6572323.1 (hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 146.0 bits (367), Expect = 1.8e-31
Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAMTSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLGK 60
MAKI LL CL++AQILLIQAM S ATTT +SAAPEPSE EG +AEAPEIRRLGK
Sbjct: 1 MAKISLL-CLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGK 60
Query: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH 103
HH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+DSVH
Sbjct: 61 HHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 101
BLAST of PI0021480 vs. NCBI nr
Match:
KAG7011935.1 (hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 142.1 bits (357), Expect = 2.6e-30
Identity = 81/102 (79.41%), Postives = 87/102 (85.29%), Query Frame = 0
Query: 1 MAKICLLFCLVVAQILLIQAMTSIATTTDLPLSAAPEPSEKGTREGSEVAEAPEIRRLGK 60
MAKI LL L++AQILLIQAM S ATTT +SAAPEPSE EG +AEAPEIRRLGK
Sbjct: 1 MAKISLL-SLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGK 60
Query: 61 HHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGLDSVH 103
HH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+DSVH
Sbjct: 61 HHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH 101
BLAST of PI0021480 vs. NCBI nr
Match:
KAF3964431.1 (hypothetical protein CMV_011281 [Castanea mollissima])
HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 64/115 (55.65%), Postives = 75/115 (65.22%), Query Frame = 0
Query: 7 LFC--LVVAQILLIQAMTS-----------------------IATTTDLPLSAAPEPSEK 66
LFC +++A+IL++QAM +A D P+S+ E S +
Sbjct: 75 LFCFMVILAEILVVQAMAGKSEGSELNPFGLKAQHKVGTLRVVARLADQPVSSVAE-SPE 134
Query: 67 GTREGSEVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 97
G +E S VAEAP IRRLGKHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD
Sbjct: 135 GNKENSNVAEAPVIRRLGKHHSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 188
BLAST of PI0021480 vs. TAIR 10
Match:
AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07
Identity = 39/90 (43.33%), Postives = 48/90 (53.33%), Query Frame = 0
Query: 15 ILLIQAMTSIATTTDLPLSAAPEPSEK-GTRE-GSEVAEAPEIRRL------GKHHG--D 74
I+L +T + + A P + K G E E AEAPE+ L G HH +
Sbjct: 6 IVLCFLLTYVFSMAAASSEAEPPATRKLGRHEWPGEEAEAPEVSHLEETVRRGHHHSTVE 65
Query: 75 KSVAGGGVIIGGLVTAIFAAVFCYIRVTRK 95
+SVAGGGVI+GGL T VFCYIR TRK
Sbjct: 66 RSVAGGGVILGGLATTFLVVVFCYIRATRK 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C590 | 1.0e-43 | 94.12 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0K3N0 | 6.7e-40 | 88.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1 | [more] |
| A0A2N9IXN3 | 3.8e-19 | 53.04 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56997 PE=4 SV=1 | [more] |
| A0A7N2R9A0 | 9.4e-18 | 55.26 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
| A0A2R6QCD3 | 2.7e-17 | 61.39 | Actin cytoskeleton-regulatory complex protein OS=Actinidia chinensis var. chinen... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0031619.1 | 2.1e-43 | 94.12 | hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK070... | [more] |
| KAE8645753.1 | 2.8e-32 | 87.91 | hypothetical protein Csa_020263 [Cucumis sativus] | [more] |
| KAG6572323.1 | 1.8e-31 | 80.39 | hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7011935.1 | 2.6e-30 | 79.41 | hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAF3964431.1 | 1.8e-18 | 55.65 | hypothetical protein CMV_011281 [Castanea mollissima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G09280.1 | 1.5e-07 | 43.33 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
