Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTAATTTTATGCTTATTATGGTTTCTTTTATTCTATACTTATAATTCTATGCTTATTATTCTTTTATTTACGTAAGTGTTTCATTTGTGGGTTTGGGCATACGAGATAGTGTCATCCATTAATGGTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGGTACGTTATGATTTCTTTTCTTTTTCCATCTTCACTATAGGACTTTAGGGTTTAGGGTTTAATAACAAAGTCCACATTGTCCCATTCTCAAACCTATATAGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG
mRNA sequence
ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG
Coding sequence (CDS)
ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG
Protein sequence
MLGSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVEHPTIPPHVEHSFALPRVQHSNAPSRDDGCPTTFME
Homology
BLAST of PI0017393 vs. ExPASy TrEMBL
Match:
A0A5A7SNZ3 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00530 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0
Query: 5 LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
+K A+ VV+HKK K PE+YSLYGFPF FQV NR SHDAI
Sbjct: 64 VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTDETVSTISAWVGSHNRASHDAI 123
Query: 65 PRIMQWSCTYSPGLKV-IQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRV 117
PRIMQWSCTYSP LK IQ+ IE TDE+ AYL++ L+I + Y+DNP+ +
Sbjct: 124 PRIMQWSCTYSPRLKTHIQA---------IELTDEELAYLDQVLDIPSTDGYKDNPAAPL 180
BLAST of PI0017393 vs. ExPASy TrEMBL
Match:
A0A5D3BGW5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00590 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 4.3e-16
Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 0
Query: 5 LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
+K A+ VV+HKK K PE+YSLYGFPF FQV NR SHDAI
Sbjct: 66 VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTHETVSTRSAWVGSHNRASHDAI 125
Query: 65 PRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVE 117
PRIMQWSCTYSP LK + IE TD++ AYL++ L+I + Y+DNP+ ++
Sbjct: 126 PRIMQWSCTYSPRLK--------TRIQAIELTDKELAYLDQVLDIPSTDGYKDNPAAPLQ 182
BLAST of PI0017393 vs. ExPASy TrEMBL
Match:
A0A5D3BXU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00160 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 5.6e-16
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0
Query: 39 QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVAN-EEIESTDEKHAYLNRSLEIL 98
Q+ANR SHDA+P I++WS TYS L VIQSQVF Q+A+ EEI+ TD++HAYL+RS +I+
Sbjct: 63 QIANRASHDAMPCIIRWSSTYSLKLNVIQSQVFGSQMAHIEEIDRTDDQHAYLDRSFQIM 122
Query: 99 TIKDYEDNPSTRVEHP----TIPPHVEHSFALPRVQHSNAPSR 135
T K Y ++ S H PP+VEH F+ VQ S++P R
Sbjct: 123 TTKGYVEDLSAPTPHHLKRLPAPPYVEHLFSPVCVQRSHSPHR 165
BLAST of PI0017393 vs. ExPASy TrEMBL
Match:
A0A5D3CIW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00300 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 8.9e-14
Identity = 60/149 (40.27%), Postives = 75/149 (50.34%), Query Frame = 0
Query: 3 GSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPG 62
GSLK + GK+ LHK KP N KS ESYSLYGF FAFQV
Sbjct: 6 GSLKGVLRGKIALHKAKPSNKKSLESYSLYGFSFAFQV---------------------- 65
Query: 63 LKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTR-------VEHPTIPP 122
VI+SQVF + IE T+EK A+LNR L+I + + Y+DNP+TR + +P+ P
Sbjct: 66 --VIESQVFGHVYKVIEPTNEKLAHLNRDLDIPSTEGYKDNPATRSFFEMMVLPYPSPCP 125
Query: 123 HVEHSFALPRVQHSNAPSRDDGCPTTFME 145
F V H+ SRD F E
Sbjct: 126 TSTSIFRPFFVSHNPHTSRDTNGGNNFEE 130
BLAST of PI0017393 vs. ExPASy TrEMBL
Match:
A0A0A0KIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 5 LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQ--------VANRGSHDAIPRIMQWS 64
LK+A++GKVVLHKKK VNNKSP+SYSL G PFAFQ VA R + AIP IMQ S
Sbjct: 28 LKRALHGKVVLHKKKFVNNKSPKSYSLNGLPFAFQIVLSISGWVAYRETSSAIPCIMQLS 87
Query: 65 CTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVEHPTIPPH 124
CT+ PGLK +++ ++ +L+++++ S+ +++ PPH
Sbjct: 88 CTHLPGLK---ARIHEL-----------------NLQMMSVLTLIRLSSSTLQNSPPPPH 139
Query: 125 VEHSFALPRVQH 129
V H P QH
Sbjct: 148 VNHPSPPPLTQH 139
BLAST of PI0017393 vs. NCBI nr
Match:
KAA0032540.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])
HSP 1 Score: 95.9 bits (237), Expect = 3.0e-16
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0
Query: 5 LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
+K A+ VV+HKK K PE+YSLYGFPF FQV NR SHDAI
Sbjct: 64 VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTDETVSTISAWVGSHNRASHDAI 123
Query: 65 PRIMQWSCTYSPGLKV-IQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRV 117
PRIMQWSCTYSP LK IQ+ IE TDE+ AYL++ L+I + Y+DNP+ +
Sbjct: 124 PRIMQWSCTYSPRLKTHIQA---------IELTDEELAYLDQVLDIPSTDGYKDNPAAPL 180
BLAST of PI0017393 vs. NCBI nr
Match:
TYJ98334.1 (hypothetical protein E5676_scaffold232G00590 [Cucumis melo var. makuwa])
HSP 1 Score: 94.4 bits (233), Expect = 8.8e-16
Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 0
Query: 5 LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
+K A+ VV+HKK K PE+YSLYGFPF FQV NR SHDAI
Sbjct: 66 VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTHETVSTRSAWVGSHNRASHDAI 125
Query: 65 PRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVE 117
PRIMQWSCTYSP LK + IE TD++ AYL++ L+I + Y+DNP+ ++
Sbjct: 126 PRIMQWSCTYSPRLK--------TRIQAIELTDKELAYLDQVLDIPSTDGYKDNPAAPLQ 182
BLAST of PI0017393 vs. NCBI nr
Match:
KAA0036688.1 (hypothetical protein E6C27_scaffold510G00330 [Cucumis melo var. makuwa] >TYK03662.1 hypothetical protein E5676_scaffold863G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 94.0 bits (232), Expect = 1.2e-15
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0
Query: 39 QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVAN-EEIESTDEKHAYLNRSLEIL 98
Q+ANR SHDA+P I++WS TYS L VIQSQVF Q+A+ EEI+ TD++HAYL+RS +I+
Sbjct: 63 QIANRASHDAMPCIIRWSSTYSLKLNVIQSQVFGSQMAHIEEIDRTDDQHAYLDRSFQIM 122
Query: 99 TIKDYEDNPSTRVEHP----TIPPHVEHSFALPRVQHSNAPSR 135
T K Y ++ S H PP+VEH F+ VQ S++P R
Sbjct: 123 TTKGYVEDLSAPTPHHLKRLPAPPYVEHLFSPVCVQRSHSPHR 165
BLAST of PI0017393 vs. NCBI nr
Match:
TYK11124.1 (hypothetical protein E5676_scaffold66G00300 [Cucumis melo var. makuwa])
HSP 1 Score: 86.7 bits (213), Expect = 1.8e-13
Identity = 60/149 (40.27%), Postives = 75/149 (50.34%), Query Frame = 0
Query: 3 GSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPG 62
GSLK + GK+ LHK KP N KS ESYSLYGF FAFQV
Sbjct: 6 GSLKGVLRGKIALHKAKPSNKKSLESYSLYGFSFAFQV---------------------- 65
Query: 63 LKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTR-------VEHPTIPP 122
VI+SQVF + IE T+EK A+LNR L+I + + Y+DNP+TR + +P+ P
Sbjct: 66 --VIESQVFGHVYKVIEPTNEKLAHLNRDLDIPSTEGYKDNPATRSFFEMMVLPYPSPCP 125
Query: 123 HVEHSFALPRVQHSNAPSRDDGCPTTFME 145
F V H+ SRD F E
Sbjct: 126 TSTSIFRPFFVSHNPHTSRDTNGGNNFEE 130
BLAST of PI0017393 vs. NCBI nr
Match:
KAA0054499.1 (hypothetical protein E6C27_scaffold24G002780 [Cucumis melo var. makuwa])
HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11
Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 0
Query: 39 QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVA-NEEIESTDEKHAYLNRSLEIL 98
+VANR SHD IPRI WS TYSPGLKVI+SQVF Q+A + I T+E+ AYL+R +I
Sbjct: 15 KVANRASHDVIPRITGWSYTYSPGLKVIKSQVFVSQIAFIQAIWPTEEEIAYLDRVFDIP 74
Query: 99 TIKDYE---DNPSTRVEHPTIPPHVEHSFALP 125
+++ YE D P + P + PH +HS LP
Sbjct: 75 SMEGYEDIHDVPFQDDDAPPVHPHDQHSLQLP 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SNZ3 | 1.5e-16 | 46.56 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G... | [more] |
| A0A5D3BGW5 | 4.3e-16 | 44.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BXU5 | 5.6e-16 | 51.46 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CIW7 | 8.9e-14 | 40.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0KIM1 | 1.5e-13 | 40.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0032540.1 | 3.0e-16 | 46.56 | Ulp1-like peptidase [Cucumis melo var. makuwa] | [more] |
| TYJ98334.1 | 8.8e-16 | 44.62 | hypothetical protein E5676_scaffold232G00590 [Cucumis melo var. makuwa] | [more] |
| KAA0036688.1 | 1.2e-15 | 51.46 | hypothetical protein E6C27_scaffold510G00330 [Cucumis melo var. makuwa] >TYK0366... | [more] |
| TYK11124.1 | 1.8e-13 | 40.27 | hypothetical protein E5676_scaffold66G00300 [Cucumis melo var. makuwa] | [more] |
| KAA0054499.1 | 1.7e-11 | 51.09 | hypothetical protein E6C27_scaffold24G002780 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
