PI0017393.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0017393.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ulp1-like peptidase
Location	chr06: 13198240 .. 13198904 (-)
Sequence length	435
RNA-Seq Expression	PI0017393.1
Synteny	PI0017393.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTAATTTTATGCTTATTATGGTTTCTTTTATTCTATACTTATAATTCTATGCTTATTATTCTTTTATTTACGTAAGTGTTTCATTTGTGGGTTTGGGCATACGAGATAGTGTCATCCATTAATGGTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGGTACGTTATGATTTCTTTTCTTTTTCCATCTTCACTATAGGACTTTAGGGTTTAGGGTTTAATAACAAAGTCCACATTGTCCCATTCTCAAACCTATATAGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG

mRNA sequence

ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG

Coding sequence (CDS)

ATGCTTGGTAGCTTGAAAAAAGCGATAAATGGAAAAGTTGTTTTACATAAGAAGAAACCTGTGAATAATAAGTCTCCAGAGTCGTATAGTCTATACGGATTTCCCTTCGCCTTTCAGGTTGCCAATAGGGGTTCGCATGATGCGATACCACGCATCATGCAATGGAGTTGCACGTACTCACCTGGGTTGAAAGTGATTCAATCACAGGTTTTTCAGGTCGCAAATGAGGAGATTGAGTCGACGGACGAGAAACATGCTTACTTGAATCGGAGTCTTGAAATTCTAACGATCAAAGACTACGAGGATAATCCATCAACTCGTGTCGAGCACCCCACTATTCCTCCTCATGTCGAGCATTCGTTTGCCCTTCCTCGTGTCCAGCATTCCAATGCTCCTTCTCGTGACGATGGTTGTCCCACGACATTCATGGAATAG

Protein sequence

MLGSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVEHPTIPPHVEHSFALPRVQHSNAPSRDDGCPTTFME

Homology

[Close]

BLAST of PI0017393.1 vs. ExPASy TrEMBL
Match: A0A5A7SNZ3 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00530 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 5   LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
           +K A+   VV+HKK     K PE+YSLYGFPF FQV                NR SHDAI
Sbjct: 64  VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTDETVSTISAWVGSHNRASHDAI 123

Query: 65  PRIMQWSCTYSPGLKV-IQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRV 117
           PRIMQWSCTYSP LK  IQ+         IE TDE+ AYL++ L+I +   Y+DNP+  +
Sbjct: 124 PRIMQWSCTYSPRLKTHIQA---------IELTDEELAYLDQVLDIPSTDGYKDNPAAPL 180

[Close]

BLAST of PI0017393.1 vs. ExPASy TrEMBL
Match: A0A5D3BGW5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00590 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 4.3e-16
Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 5   LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
           +K A+   VV+HKK     K PE+YSLYGFPF FQV                NR SHDAI
Sbjct: 66  VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTHETVSTRSAWVGSHNRASHDAI 125

Query: 65  PRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVE 117
           PRIMQWSCTYSP LK           + IE TD++ AYL++ L+I +   Y+DNP+  ++
Sbjct: 126 PRIMQWSCTYSPRLK--------TRIQAIELTDKELAYLDQVLDIPSTDGYKDNPAAPLQ 182

[Close]

BLAST of PI0017393.1 vs. ExPASy TrEMBL
Match: A0A5D3BXU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00160 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.6e-16
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 39  QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVAN-EEIESTDEKHAYLNRSLEIL 98
           Q+ANR SHDA+P I++WS TYS  L VIQSQVF  Q+A+ EEI+ TD++HAYL+RS +I+
Sbjct: 63  QIANRASHDAMPCIIRWSSTYSLKLNVIQSQVFGSQMAHIEEIDRTDDQHAYLDRSFQIM 122

Query: 99  TIKDYEDNPSTRVEHP----TIPPHVEHSFALPRVQHSNAPSR 135
           T K Y ++ S    H       PP+VEH F+   VQ S++P R
Sbjct: 123 TTKGYVEDLSAPTPHHLKRLPAPPYVEHLFSPVCVQRSHSPHR 165

[Close]

BLAST of PI0017393.1 vs. ExPASy TrEMBL
Match: A0A5D3CIW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00300 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.9e-14
Identity = 60/149 (40.27%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 3   GSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPG 62
           GSLK  + GK+ LHK KP N KS ESYSLYGF FAFQV                      
Sbjct: 6   GSLKGVLRGKIALHKAKPSNKKSLESYSLYGFSFAFQV---------------------- 65

Query: 63  LKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTR-------VEHPTIPP 122
             VI+SQVF    + IE T+EK A+LNR L+I + + Y+DNP+TR       + +P+  P
Sbjct: 66  --VIESQVFGHVYKVIEPTNEKLAHLNRDLDIPSTEGYKDNPATRSFFEMMVLPYPSPCP 125

Query: 123 HVEHSFALPRVQHSNAPSRDDGCPTTFME 145
                F    V H+   SRD      F E
Sbjct: 126 TSTSIFRPFFVSHNPHTSRDTNGGNNFEE 130

[Close]

BLAST of PI0017393.1 vs. ExPASy TrEMBL
Match: A0A0A0KIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 5   LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQ--------VANRGSHDAIPRIMQWS 64
           LK+A++GKVVLHKKK VNNKSP+SYSL G PFAFQ        VA R +  AIP IMQ S
Sbjct: 28  LKRALHGKVVLHKKKFVNNKSPKSYSLNGLPFAFQIVLSISGWVAYRETSSAIPCIMQLS 87

Query: 65  CTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVEHPTIPPH 124
           CT+ PGLK   +++ ++                 +L+++++       S+ +++   PPH
Sbjct: 88  CTHLPGLK---ARIHEL-----------------NLQMMSVLTLIRLSSSTLQNSPPPPH 139

Query: 125 VEHSFALPRVQH 129
           V H    P  QH
Sbjct: 148 VNHPSPPPLTQH 139

[Close]

BLAST of PI0017393.1 vs. NCBI nr
Match: KAA0032540.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-16
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 5   LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
           +K A+   VV+HKK     K PE+YSLYGFPF FQV                NR SHDAI
Sbjct: 64  VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTDETVSTISAWVGSHNRASHDAI 123

Query: 65  PRIMQWSCTYSPGLKV-IQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRV 117
           PRIMQWSCTYSP LK  IQ+         IE TDE+ AYL++ L+I +   Y+DNP+  +
Sbjct: 124 PRIMQWSCTYSPRLKTHIQA---------IELTDEELAYLDQVLDIPSTDGYKDNPAAPL 180

[Close]

BLAST of PI0017393.1 vs. NCBI nr
Match: TYJ98334.1 (hypothetical protein E5676_scaffold232G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 8.8e-16
Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 5   LKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQV---------------ANRGSHDAI 64
           +K A+   VV+HKK     K PE+YSLYGFPF FQV                NR SHDAI
Sbjct: 66  VKGALRENVVMHKK-----KLPETYSLYGFPFTFQVWTHETVSTRSAWVGSHNRASHDAI 125

Query: 65  PRIMQWSCTYSPGLKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTRVE 117
           PRIMQWSCTYSP LK           + IE TD++ AYL++ L+I +   Y+DNP+  ++
Sbjct: 126 PRIMQWSCTYSPRLK--------TRIQAIELTDKELAYLDQVLDIPSTDGYKDNPAAPLQ 182

[Close]

BLAST of PI0017393.1 vs. NCBI nr
Match: KAA0036688.1 (hypothetical protein E6C27_scaffold510G00330 [Cucumis melo var. makuwa] >TYK03662.1 hypothetical protein E5676_scaffold863G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-15
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 39  QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVAN-EEIESTDEKHAYLNRSLEIL 98
           Q+ANR SHDA+P I++WS TYS  L VIQSQVF  Q+A+ EEI+ TD++HAYL+RS +I+
Sbjct: 63  QIANRASHDAMPCIIRWSSTYSLKLNVIQSQVFGSQMAHIEEIDRTDDQHAYLDRSFQIM 122

Query: 99  TIKDYEDNPSTRVEHP----TIPPHVEHSFALPRVQHSNAPSR 135
           T K Y ++ S    H       PP+VEH F+   VQ S++P R
Sbjct: 123 TTKGYVEDLSAPTPHHLKRLPAPPYVEHLFSPVCVQRSHSPHR 165

[Close]

BLAST of PI0017393.1 vs. NCBI nr
Match: TYK11124.1 (hypothetical protein E5676_scaffold66G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-13
Identity = 60/149 (40.27%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 3   GSLKKAINGKVVLHKKKPVNNKSPESYSLYGFPFAFQVANRGSHDAIPRIMQWSCTYSPG 62
           GSLK  + GK+ LHK KP N KS ESYSLYGF FAFQV                      
Sbjct: 6   GSLKGVLRGKIALHKAKPSNKKSLESYSLYGFSFAFQV---------------------- 65

Query: 63  LKVIQSQVFQVANEEIESTDEKHAYLNRSLEILTIKDYEDNPSTR-------VEHPTIPP 122
             VI+SQVF    + IE T+EK A+LNR L+I + + Y+DNP+TR       + +P+  P
Sbjct: 66  --VIESQVFGHVYKVIEPTNEKLAHLNRDLDIPSTEGYKDNPATRSFFEMMVLPYPSPCP 125

Query: 123 HVEHSFALPRVQHSNAPSRDDGCPTTFME 145
                F    V H+   SRD      F E
Sbjct: 126 TSTSIFRPFFVSHNPHTSRDTNGGNNFEE 130

[Close]

BLAST of PI0017393.1 vs. NCBI nr
Match: KAA0054499.1 (hypothetical protein E6C27_scaffold24G002780 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11
Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 39  QVANRGSHDAIPRIMQWSCTYSPGLKVIQSQVF--QVA-NEEIESTDEKHAYLNRSLEIL 98
           +VANR SHD IPRI  WS TYSPGLKVI+SQVF  Q+A  + I  T+E+ AYL+R  +I 
Sbjct: 15  KVANRASHDVIPRITGWSYTYSPGLKVIKSQVFVSQIAFIQAIWPTEEEIAYLDRVFDIP 74

Query: 99  TIKDYE---DNPSTRVEHPTIPPHVEHSFALP 125
           +++ YE   D P    + P + PH +HS  LP
Sbjct: 75  SMEGYEDIHDVPFQDDDAPPVHPHDQHSLQLP 106

The following BLAST results are available for this feature:

BLAST of PI0017393.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017393.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNZ3	1.5e-16	46.56	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G...	[more]
A0A5D3BGW5	4.3e-16	44.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BXU5	5.6e-16	51.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CIW7	8.9e-14	40.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KIM1	1.5e-13	40.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1	[more]

BLAST of PI0017393.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032540.1	3.0e-16	46.56	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
TYJ98334.1	8.8e-16	44.62	hypothetical protein E5676_scaffold232G00590 [Cucumis melo var. makuwa]	[more]
KAA0036688.1	1.2e-15	51.46	hypothetical protein E6C27_scaffold510G00330 [Cucumis melo var. makuwa] >TYK0366...	[more]
TYK11124.1	1.8e-13	40.27	hypothetical protein E5676_scaffold66G00300 [Cucumis melo var. makuwa]	[more]
KAA0054499.1	1.7e-11	51.09	hypothetical protein E6C27_scaffold24G002780 [Cucumis melo var. makuwa]	[more]

BLAST of PI0017393.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0017393	PI0017393	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017393.1-exon	PI0017393.1-exon-chr06:13198240..13198448	exon
PI0017393.1-exon	PI0017393.1-exon-chr06:13198550..13198658	exon
PI0017393.1-exon	PI0017393.1-exon-chr06:13198788..13198904	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0017393.1-cds	PI0017393.1-cds-chr06:13198240..13198448	CDS
PI0017393.1-cds	PI0017393.1-cds-chr06:13198550..13198658	CDS
PI0017393.1-cds	PI0017393.1-cds-chr06:13198788..13198904	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0017393.1	PI0017393.1-protein	polypeptide