Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAGAAGTGCAGTCAGTTAATCCAGGAGGTAGAAGAAATGTGGAGGAGGAGTTATATGATCATGTATCGCAACGACTGATAGATGGTTTATCTAGGAAGCTGGAGAAAAAGTATGGAATAGAACAGCTTAAGGCGTTAGGTGCTAAGAAATTTACAGAAATGGAGGAACCTGAGCAAGCGGAGAAAATGTTGCGGACATTGAAGAAATGTTTTCGAGTAATGCAGTGCCCTGAGGATAGGAAGGTGTCTTTTGCAGTGTTTTTACTATAA
mRNA sequence
ATGGATTCAGAAGTGCAGTCAGTTAATCCAGGAGGTAGAAGAAATGTGGAGGAGGAGTTATATGATCATGTATCGCAACGACTGATAGATGGTTTATCTAGGAAGCTGGAGAAAAAGTATGGAATAGAACAGCTTAAGGCGTTAGGTGCTAAGAAATTTACAGAAATGGAGGAACCTGAGCAAGCGGAGAAAATGTTGCGGACATTGAAGAAATGTTTTCGAGTAATGCAGTGCCCTGAGGATAGGAAGGTGTCTTTTGCAGTGTTTTTACTATAA
Coding sequence (CDS)
ATGGATTCAGAAGTGCAGTCAGTTAATCCAGGAGGTAGAAGAAATGTGGAGGAGGAGTTATATGATCATGTATCGCAACGACTGATAGATGGTTTATCTAGGAAGCTGGAGAAAAAGTATGGAATAGAACAGCTTAAGGCGTTAGGTGCTAAGAAATTTACAGAAATGGAGGAACCTGAGCAAGCGGAGAAAATGTTGCGGACATTGAAGAAATGTTTTCGAGTAATGCAGTGCCCTGAGGATAGGAAGGTGTCTTTTGCAGTGTTTTTACTATAA
Protein sequence
MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPEQAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL
Homology
BLAST of PI0016476 vs. ExPASy TrEMBL
Match:
A0A0A0LI31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 1.4e-20
Identity = 52/91 (57.14%), Postives = 73/91 (80.22%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
+DSE ++NP RR EE LYD +QRLI+ L+++L+K +GIE++KALGA +F +E E
Sbjct: 5 IDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIENHE 64
Query: 61 QAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
+AEK +RTL+KCFRVMQCP++R+V+ AVFLL
Sbjct: 65 EAEKWIRTLEKCFRVMQCPKERRVNLAVFLL 95
BLAST of PI0016476 vs. ExPASy TrEMBL
Match:
A0A5D3CSN0 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00330 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
+D EV VN RR EE +YD V+Q +ID ++++LEKK+GIE+L+ALG +FT EP
Sbjct: 18 IDLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGIERLEALGTTEFTGTTEPR 77
Query: 61 QAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
+A+K ++TL+KCFRV QC ++RKV A+FLL
Sbjct: 78 EADKRIKTLEKCFRVTQCSQERKVDLAMFLL 108
BLAST of PI0016476 vs. ExPASy TrEMBL
Match:
A0A5D3DES5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00660 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 3.6e-13
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 0
Query: 2 DSEVQSVNPGGRRNVEEELYDHVSQRLIDGL---SRKLEKKYGIEQLKALGAKKFTEMEE 61
+S+ +S P N+EE+L D ++QRLI G+ EKKYGIE+LKALGA F
Sbjct: 46 ESDAESSRPHVEGNMEEQLLDRLAQRLISGIRSAQSDPEKKYGIERLKALGATTFVGTTN 105
Query: 62 PEQAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
P AE L ++KCFRV +CPEDRKV A FLL
Sbjct: 106 PADAEAWLTLIEKCFRVTRCPEDRKVELASFLL 138
BLAST of PI0016476 vs. ExPASy TrEMBL
Match:
A0A5A7SJ99 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00100 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
Query: 2 DSEVQSVNPGGRRNVEEELYDHVSQRLIDGL---SRKLEKKYGIEQLKALGAKKFTEMEE 61
+S+ +S P NVEE+L D ++QRLI G+ EKKYGIE+LKALGA F
Sbjct: 27 ESDAESSRPHVEGNVEEQLLDRLAQRLILGIRLAQSDSEKKYGIERLKALGATTFVGTTN 86
Query: 62 PEQAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
P AE+ L ++KCF+V +C EDRKV A FLL
Sbjct: 87 PVDAEEWLTLIEKCFKVTRCSEDRKVELAAFLL 119
BLAST of PI0016476 vs. ExPASy TrEMBL
Match:
A0A5D3CDA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001250 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
MD E S+NP RR+ +E LYD V+QRLID L+++ EKK+ IE+LKALGA KF P+
Sbjct: 18 MDLEAHSLNPNARRDQKEALYDRVAQRLIDVLTQQPEKKFQIEKLKALGATKFNGTTNPD 77
Query: 61 QAEKMLRTLKKCF 74
+AEK RTL+KCF
Sbjct: 78 EAEKWSRTLEKCF 90
BLAST of PI0016476 vs. NCBI nr
Match:
KGN61535.1 (hypothetical protein Csa_006696 [Cucumis sativus])
HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20
Identity = 52/91 (57.14%), Postives = 73/91 (80.22%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
+DSE ++NP RR EE LYD +QRLI+ L+++L+K +GIE++KALGA +F +E E
Sbjct: 5 IDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIENHE 64
Query: 61 QAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
+AEK +RTL+KCFRVMQCP++R+V+ AVFLL
Sbjct: 65 EAEKWIRTLEKCFRVMQCPKERRVNLAVFLL 95
BLAST of PI0016476 vs. NCBI nr
Match:
KAA0066608.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa])
HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
+D EV VN RR EE +YD V+Q +ID ++++LEKK+GIE+L+ALG +FT EP
Sbjct: 18 IDLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGIERLEALGTTEFTGTTEPR 77
Query: 61 QAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
+A+K ++TL+KCFRV QC ++RKV A+FLL
Sbjct: 78 EADKRIKTLEKCFRVTQCSQERKVDLAMFLL 108
BLAST of PI0016476 vs. NCBI nr
Match:
KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 84.0 bits (206), Expect = 7.5e-13
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 0
Query: 2 DSEVQSVNPGGRRNVEEELYDHVSQRLIDGL---SRKLEKKYGIEQLKALGAKKFTEMEE 61
+S+ +S P N+EE+L D ++QRLI G+ EKKYGIE+LKALGA F
Sbjct: 46 ESDAESSRPHVEGNMEEQLLDRLAQRLISGIRSAQSDPEKKYGIERLKALGATTFVGTTN 105
Query: 62 PEQAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
P AE L ++KCFRV +CPEDRKV A FLL
Sbjct: 106 PADAEAWLTLIEKCFRVTRCPEDRKVELASFLL 138
BLAST of PI0016476 vs. NCBI nr
Match:
KAA0037861.1 (hypothetical protein E6C27_scaffold36G00200 [Cucumis melo var. makuwa] >TYK09821.1 hypothetical protein E5676_scaffold127G001250 [Cucumis melo var. makuwa])
HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 1 MDSEVQSVNPGGRRNVEEELYDHVSQRLIDGLSRKLEKKYGIEQLKALGAKKFTEMEEPE 60
MD E S+NP RR+ +E LYD V+QRLID L+++ EKK+ IE+LKALGA KF P+
Sbjct: 18 MDLEAHSLNPNARRDQKEALYDRVAQRLIDVLTQQPEKKFQIEKLKALGATKFNGTTNPD 77
Query: 61 QAEKMLRTLKKCF 74
+AEK RTL+KCF
Sbjct: 78 EAEKWSRTLEKCF 90
BLAST of PI0016476 vs. NCBI nr
Match:
KAA0026280.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
Query: 2 DSEVQSVNPGGRRNVEEELYDHVSQRLIDGL---SRKLEKKYGIEQLKALGAKKFTEMEE 61
+S+ +S P NVEE+L D ++QRLI G+ EKKYGIE+LKALGA F
Sbjct: 27 ESDAESSRPHVEGNVEEQLLDRLAQRLILGIRLAQSDSEKKYGIERLKALGATTFVGTTN 86
Query: 62 PEQAEKMLRTLKKCFRVMQCPEDRKVSFAVFLL 92
P AE+ L ++KCF+V +C EDRKV A FLL
Sbjct: 87 PVDAEEWLTLIEKCFKVTRCSEDRKVELAAFLL 119
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LI31 | 1.4e-20 | 57.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1 | [more] |
| A0A5D3CSN0 | 9.3e-17 | 52.75 | A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5D3DES5 | 3.6e-13 | 50.54 | DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| A0A5A7SJ99 | 3.1e-12 | 49.46 | DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| A0A5D3CDA4 | 3.1e-12 | 57.53 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN61535.1 | 2.9e-20 | 57.14 | hypothetical protein Csa_006696 [Cucumis sativus] | [more] |
| KAA0066608.1 | 1.9e-16 | 52.75 | A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase ancho... | [more] |
| KAA0035225.1 | 7.5e-13 | 50.54 | DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 D... | [more] |
| KAA0037861.1 | 6.4e-12 | 57.53 | hypothetical protein E6C27_scaffold36G00200 [Cucumis melo var. makuwa] >TYK09821... | [more] |
| KAA0026280.1 | 6.4e-12 | 49.46 | DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 D... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
