Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA
mRNA sequence
ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA
Coding sequence (CDS)
ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA
Protein sequence
MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR
Homology
BLAST of PI0016014 vs. ExPASy TrEMBL
Match:
A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
MN+K ++D +ISEAKRIEAQGGAI RLT VIN LT+RLDRMEVALRN HQ +VLNEGV+N
Sbjct: 1 MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60
Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
EEDEDNET LAGQN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETFLAGQNPRGRRVLGQGRRR 87
BLAST of PI0016014 vs. ExPASy TrEMBL
Match:
A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
MNQK ++D EISEA+RIEAQGGAI RLT VIN LTDRLDRM VALRNRHQ +VLNEGV+N
Sbjct: 1 MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60
Query: 61 EEDEDNETLLAGQNQRGRRV 81
E+DEDNETLLA QN RRV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80
BLAST of PI0016014 vs. ExPASy TrEMBL
Match:
A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 41 MEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR 88
M+VALRN HQ +VLNEGV+N+EDEDNET+L GQN +GRRVLGQDRRR
Sbjct: 1 MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRR 47
BLAST of PI0016014 vs. ExPASy TrEMBL
Match:
A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRN-RHQEDVLNEGVK 60
MNQ + EI+EA+ EAQ G I RL VI+ LTDR++R+++AL N + +E +LNEGV+
Sbjct: 1 MNQDEGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIQIALGNLQGREVLLNEGVE 60
Query: 61 NEEDEDNETLLAGQNQRGRRVLGQDRRR 88
NEED DN TLLAG + RG R +G+ R R
Sbjct: 61 NEED-DNVTLLAGHSPRGGRDVGRGRGR 87
BLAST of PI0016014 vs. ExPASy TrEMBL
Match:
A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRN-RHQEDVLNEGVK 60
MNQ + REI+EA+ EAQ G I L VI+ LTDR++R+E+AL N + +E +LNEGV+
Sbjct: 1 MNQDGGNGREINEARWREAQVGTITCLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60
Query: 61 NEEDEDNETLLAGQNQRGRR 80
NEED DN TLLAG + RG R
Sbjct: 61 NEED-DNVTLLAGHSPRGGR 79
BLAST of PI0016014 vs. NCBI nr
Match:
KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus])
HSP 1 Score: 131.7 bits (330), Expect = 3.0e-27
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
MN+K ++D +ISEAKRIEAQGGAI RLT VIN LT+RLDRMEVALRN HQ +VLNEGV+N
Sbjct: 1 MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60
Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
EEDEDNET LAGQN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETFLAGQNPRGRRVLGQGRRR 87
BLAST of PI0016014 vs. NCBI nr
Match:
KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus])
HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27
Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
MNQK ++ EISEA+RIEAQGGAI RLT VIN LTDRLDR+EVALRNRHQ VLNEGV+N
Sbjct: 1 MNQKTKNSGEISEARRIEAQGGAIVRLTQVINDLTDRLDRIEVALRNRHQGQVLNEGVEN 60
Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
EEDEDNETLLA QN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETLLAIQNLRGRRVLGQGRRR 87
BLAST of PI0016014 vs. NCBI nr
Match:
KGN53741.1 (hypothetical protein Csa_015371 [Cucumis sativus])
HSP 1 Score: 117.5 bits (293), Expect = 5.9e-23
Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
MNQK ++D EISEA+RIEAQGGAI RLT VIN LTDRLDRM VALRNRHQ +VLNEGV+N
Sbjct: 1 MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60
Query: 61 EEDEDNETLLAGQNQRGRRV 81
E+DEDNETLLA QN RRV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80
BLAST of PI0016014 vs. NCBI nr
Match:
XP_038888883.1 (uncharacterized protein LOC120078660 [Benincasa hispida])
HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 1 MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDV-LNEGVK 60
M+Q D E SEA+ EAQ G I RLT V+ L DR++RMEVALRN Q ++ NE
Sbjct: 1 MSQGEGDRVETSEARYREAQVGVITRLTKVVKSLIDRVERMEVALRNPQQGEMGCNEEFD 60
Query: 61 NEEDEDNETLLAGQNQRGRRVLGQDRRR 88
NEED+DNETLL GQN RG VLG+ R R
Sbjct: 61 NEEDDDNETLLVGQNSRGMGVLGRGRGR 88
BLAST of PI0016014 vs. NCBI nr
Match:
KAA0053330.1 (hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 73.9 bits (180), Expect = 7.4e-10
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 41 MEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR 88
M+VALRN HQ +VLNEGV+N+EDEDNET+L GQN +GRRVLGQDRRR
Sbjct: 1 MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRR 47
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KC00 | 1.5e-27 | 80.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1 | [more] |
| A0A0A0L0S3 | 2.8e-23 | 78.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1 | [more] |
| A0A5A7UDQ9 | 3.6e-10 | 78.72 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A6J1EHL9 | 1.4e-09 | 53.41 | uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC1114326... | [more] |
| A0A6J1ETN1 | 1.2e-08 | 56.25 | uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN47250.1 | 3.0e-27 | 80.46 | hypothetical protein Csa_016986 [Cucumis sativus] | [more] |
| KAE8646857.1 | 8.8e-27 | 81.61 | hypothetical protein Csa_020829, partial [Cucumis sativus] | [more] |
| KGN53741.1 | 5.9e-23 | 78.75 | hypothetical protein Csa_015371 [Cucumis sativus] | [more] |
| XP_038888883.1 | 1.4e-11 | 56.82 | uncharacterized protein LOC120078660 [Benincasa hispida] | [more] |
| KAA0053330.1 | 7.4e-10 | 78.72 | hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
