PI0016014 (gene) Melon (PI 482460) v1

Overview
NamePI0016014
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 3152754 .. 3153017 (+)
RNA-Seq ExpressionPI0016014
SyntenyPI0016014
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA

mRNA sequence

ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA

Coding sequence (CDS)

ATGAATCAAAAGGTTGAAGATGATAGGGAGATTAGTGAAGCTAAGAGGATAGAAGCACAAGGAGGAGCAATTTTTCGTTTGACTCACGTAATTAATGGCTTGACAGATCGATTAGATAGGATGGAGGTAGCTTTAAGAAATCGTCACCAAGAGGATGTCTTGAATGAAGGAGTAAAAAATGAAGAAGATGAGGATAATGAAACTCTTTTAGCTGGACAAAATCAAAGGGGAAGGAGAGTGTTAGGGCAAGATAGACGAAGATGA

Protein sequence

MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR
Homology
BLAST of PI0016014 vs. ExPASy TrEMBL
Match: A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
          MN+K ++D +ISEAKRIEAQGGAI RLT VIN LT+RLDRMEVALRN HQ +VLNEGV+N
Sbjct: 1  MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
          EEDEDNET LAGQN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETFLAGQNPRGRRVLGQGRRR 87

BLAST of PI0016014 vs. ExPASy TrEMBL
Match: A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
          MNQK ++D EISEA+RIEAQGGAI RLT VIN LTDRLDRM VALRNRHQ +VLNEGV+N
Sbjct: 1  MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60

Query: 61 EEDEDNETLLAGQNQRGRRV 81
          E+DEDNETLLA QN   RRV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80

BLAST of PI0016014 vs. ExPASy TrEMBL
Match: A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0

Query: 41 MEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR 88
          M+VALRN HQ +VLNEGV+N+EDEDNET+L GQN +GRRVLGQDRRR
Sbjct: 1  MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRR 47

BLAST of PI0016014 vs. ExPASy TrEMBL
Match: A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRN-RHQEDVLNEGVK 60
          MNQ   +  EI+EA+  EAQ G I RL  VI+ LTDR++R+++AL N + +E +LNEGV+
Sbjct: 1  MNQDEGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIQIALGNLQGREVLLNEGVE 60

Query: 61 NEEDEDNETLLAGQNQRGRRVLGQDRRR 88
          NEED DN TLLAG + RG R +G+ R R
Sbjct: 61 NEED-DNVTLLAGHSPRGGRDVGRGRGR 87

BLAST of PI0016014 vs. ExPASy TrEMBL
Match: A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRN-RHQEDVLNEGVK 60
          MNQ   + REI+EA+  EAQ G I  L  VI+ LTDR++R+E+AL N + +E +LNEGV+
Sbjct: 1  MNQDGGNGREINEARWREAQVGTITCLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60

Query: 61 NEEDEDNETLLAGQNQRGRR 80
          NEED DN TLLAG + RG R
Sbjct: 61 NEED-DNVTLLAGHSPRGGR 79

BLAST of PI0016014 vs. NCBI nr
Match: KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 3.0e-27
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
          MN+K ++D +ISEAKRIEAQGGAI RLT VIN LT+RLDRMEVALRN HQ +VLNEGV+N
Sbjct: 1  MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
          EEDEDNET LAGQN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETFLAGQNPRGRRVLGQGRRR 87

BLAST of PI0016014 vs. NCBI nr
Match: KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27
Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
          MNQK ++  EISEA+RIEAQGGAI RLT VIN LTDRLDR+EVALRNRHQ  VLNEGV+N
Sbjct: 1  MNQKTKNSGEISEARRIEAQGGAIVRLTQVINDLTDRLDRIEVALRNRHQGQVLNEGVEN 60

Query: 61 EEDEDNETLLAGQNQRGRRVLGQDRRR 88
          EEDEDNETLLA QN RGRRVLGQ RRR
Sbjct: 61 EEDEDNETLLAIQNLRGRRVLGQGRRR 87

BLAST of PI0016014 vs. NCBI nr
Match: KGN53741.1 (hypothetical protein Csa_015371 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 5.9e-23
Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDVLNEGVKN 60
          MNQK ++D EISEA+RIEAQGGAI RLT VIN LTDRLDRM VALRNRHQ +VLNEGV+N
Sbjct: 1  MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60

Query: 61 EEDEDNETLLAGQNQRGRRV 81
          E+DEDNETLLA QN   RRV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80

BLAST of PI0016014 vs. NCBI nr
Match: XP_038888883.1 (uncharacterized protein LOC120078660 [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 1  MNQKVEDDREISEAKRIEAQGGAIFRLTHVINGLTDRLDRMEVALRNRHQEDV-LNEGVK 60
          M+Q   D  E SEA+  EAQ G I RLT V+  L DR++RMEVALRN  Q ++  NE   
Sbjct: 1  MSQGEGDRVETSEARYREAQVGVITRLTKVVKSLIDRVERMEVALRNPQQGEMGCNEEFD 60

Query: 61 NEEDEDNETLLAGQNQRGRRVLGQDRRR 88
          NEED+DNETLL GQN RG  VLG+ R R
Sbjct: 61 NEEDDDNETLLVGQNSRGMGVLGRGRGR 88

BLAST of PI0016014 vs. NCBI nr
Match: KAA0053330.1 (hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 7.4e-10
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0

Query: 41 MEVALRNRHQEDVLNEGVKNEEDEDNETLLAGQNQRGRRVLGQDRRR 88
          M+VALRN HQ +VLNEGV+N+EDEDNET+L GQN +GRRVLGQDRRR
Sbjct: 1  MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRR 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KC001.5e-2780.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1[more]
A0A0A0L0S32.8e-2378.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1[more]
A0A5A7UDQ93.6e-1078.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1EHL91.4e-0953.41uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
A0A6J1ETN11.2e-0856.25uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
Match NameE-valueIdentityDescription
KGN47250.13.0e-2780.46hypothetical protein Csa_016986 [Cucumis sativus][more]
KAE8646857.18.8e-2781.61hypothetical protein Csa_020829, partial [Cucumis sativus][more]
KGN53741.15.9e-2378.75hypothetical protein Csa_015371 [Cucumis sativus][more]
XP_038888883.11.4e-1156.82uncharacterized protein LOC120078660 [Benincasa hispida][more]
KAA0053330.17.4e-1078.72hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016014.1PI0016014.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding