Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA
mRNA sequence
ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA
Coding sequence (CDS)
ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA
Protein sequence
MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPLVAAVNGPENVMSKHLSSTNDNI
Homology
BLAST of PI0014806 vs. ExPASy TrEMBL
Match:
A0A5A7TE82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002380 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0
Query: 1 MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
MNNN FW E+DGFYV PPI G EEVDGFASMSE T+NTQS AH SNRSSKKRAR+VDPL
Sbjct: 1 MNNNGFWIEMDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPL 60
Query: 61 VAAVNGPENVMSKHLSSTNDNI 83
VAAVNG ENVMSKHLSS NDNI
Sbjct: 61 VAAVNGLENVMSKHLSSANDNI 82
BLAST of PI0014806 vs. ExPASy TrEMBL
Match:
A0A0A0L2J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 5.2e-11
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 10 IDGFYVSNPPIAGGEEVDGFASMSEATSNTQS-TAHASNRSSKKRARNVDPLVAAV 65
+D FYV PPI GGEEVDG+ASMSEAT+NTQS AH SNR SKKRAR+VD LVA+V
Sbjct: 1 MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56
BLAST of PI0014806 vs. NCBI nr
Match:
KAA0041258.1 (hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa])
HSP 1 Score: 133.7 bits (335), Expect = 7.5e-28
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0
Query: 1 MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
MNNN FW E+DGFYV PPI G EEVDGFASMSE T+NTQS AH SNRSSKKRAR+VDPL
Sbjct: 1 MNNNGFWIEMDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPL 60
Query: 61 VAAVNGPENVMSKHLSSTNDNI 83
VAAVNG ENVMSKHLSS NDNI
Sbjct: 61 VAAVNGLENVMSKHLSSANDNI 82
BLAST of PI0014806 vs. NCBI nr
Match:
KGN56195.1 (hypothetical protein Csa_009969 [Cucumis sativus])
HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 10 IDGFYVSNPPIAGGEEVDGFASMSEATSNTQS-TAHASNRSSKKRARNVDPLVAAV 65
+D FYV PPI GGEEVDG+ASMSEAT+NTQS AH SNR SKKRAR+VD LVA+V
Sbjct: 1 MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56
BLAST of PI0014806 vs. NCBI nr
Match:
XP_038883815.1 (uncharacterized protein LOC120074677 [Benincasa hispida])
HSP 1 Score: 68.6 bits (166), Expect = 2.9e-08
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 1 MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAH 45
M+NNDFWR+ GFYV +PPI GGEEVDG SMSEAT+N QS+AH
Sbjct: 89 MDNNDFWRDECGFYVPDPPIVGGEEVDGPTSMSEATTNIQSSAH 132
BLAST of PI0014806 vs. NCBI nr
Match:
XP_038895748.1 (uncharacterized protein LOC120083912 [Benincasa hispida])
HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 1 MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
M+NNDFWRE+D FYVS+PPI GG+EVDG MSEA +N + S + A V+
Sbjct: 56 MDNNDFWREMDDFYVSHPPIVGGKEVDGPTLMSEAATN------VAEPESTREALKVEAK 115
Query: 61 VAAVNGPENVMSKHLSST 79
+ P+N+ SK S T
Sbjct: 116 AKGIK-PKNMDSKAWSFT 126
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TE82 | 3.6e-28 | 82.93 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0L2J4 | 5.2e-11 | 75.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041258.1 | 7.5e-28 | 82.93 | hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa] | [more] |
| KGN56195.1 | 1.1e-10 | 75.00 | hypothetical protein Csa_009969 [Cucumis sativus] | [more] |
| XP_038883815.1 | 2.9e-08 | 72.73 | uncharacterized protein LOC120074677 [Benincasa hispida] | [more] |
| XP_038895748.1 | 6.1e-06 | 46.15 | uncharacterized protein LOC120083912 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
