PI0014806 (gene) Melon (PI 482460) v1

Overview
NamePI0014806
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 19277412 .. 19277660 (-)
RNA-Seq ExpressionPI0014806
SyntenyPI0014806
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA

mRNA sequence

ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA

Coding sequence (CDS)

ATGAACAACAATGATTTTTGGAGAGAAATTGATGGTTTTTATGTGTCTAATCCACCAATAGCTGGAGGGGAAGAAGTAGATGGATTTGCTTCCATGAGTGAAGCAACATCAAATACACAATCTACCGCACATGCATCAAATAGATCTAGTAAGAAAAGAGCAAGAAATGTGGACCCATTGGTAGCTGCAGTGAATGGTCCTGAGAATGTTATGAGCAAACATCTTTCAAGTACTAATGATAATATTTAA

Protein sequence

MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPLVAAVNGPENVMSKHLSSTNDNI
Homology
BLAST of PI0014806 vs. ExPASy TrEMBL
Match: A0A5A7TE82 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002380 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 1  MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
          MNNN FW E+DGFYV  PPI G EEVDGFASMSE T+NTQS AH SNRSSKKRAR+VDPL
Sbjct: 1  MNNNGFWIEMDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPL 60

Query: 61 VAAVNGPENVMSKHLSSTNDNI 83
          VAAVNG ENVMSKHLSS NDNI
Sbjct: 61 VAAVNGLENVMSKHLSSANDNI 82

BLAST of PI0014806 vs. ExPASy TrEMBL
Match: A0A0A0L2J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.2e-11
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 10 IDGFYVSNPPIAGGEEVDGFASMSEATSNTQS-TAHASNRSSKKRARNVDPLVAAV 65
          +D FYV  PPI GGEEVDG+ASMSEAT+NTQS  AH SNR SKKRAR+VD LVA+V
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56

BLAST of PI0014806 vs. NCBI nr
Match: KAA0041258.1 (hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 7.5e-28
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 1  MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
          MNNN FW E+DGFYV  PPI G EEVDGFASMSE T+NTQS AH SNRSSKKRAR+VDPL
Sbjct: 1  MNNNGFWIEMDGFYVRKPPIVGEEEVDGFASMSETTTNTQSIAHTSNRSSKKRARSVDPL 60

Query: 61 VAAVNGPENVMSKHLSSTNDNI 83
          VAAVNG ENVMSKHLSS NDNI
Sbjct: 61 VAAVNGLENVMSKHLSSANDNI 82

BLAST of PI0014806 vs. NCBI nr
Match: KGN56195.1 (hypothetical protein Csa_009969 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0

Query: 10 IDGFYVSNPPIAGGEEVDGFASMSEATSNTQS-TAHASNRSSKKRARNVDPLVAAV 65
          +D FYV  PPI GGEEVDG+ASMSEAT+NTQS  AH SNR SKKRAR+VD LVA+V
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVASV 56

BLAST of PI0014806 vs. NCBI nr
Match: XP_038883815.1 (uncharacterized protein LOC120074677 [Benincasa hispida])

HSP 1 Score: 68.6 bits (166), Expect = 2.9e-08
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0

Query: 1   MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAH 45
           M+NNDFWR+  GFYV +PPI GGEEVDG  SMSEAT+N QS+AH
Sbjct: 89  MDNNDFWRDECGFYVPDPPIVGGEEVDGPTSMSEATTNIQSSAH 132

BLAST of PI0014806 vs. NCBI nr
Match: XP_038895748.1 (uncharacterized protein LOC120083912 [Benincasa hispida])

HSP 1 Score: 60.8 bits (146), Expect = 6.1e-06
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 0

Query: 1   MNNNDFWREIDGFYVSNPPIAGGEEVDGFASMSEATSNTQSTAHASNRSSKKRARNVDPL 60
           M+NNDFWRE+D FYVS+PPI GG+EVDG   MSEA +N       +   S + A  V+  
Sbjct: 56  MDNNDFWREMDDFYVSHPPIVGGKEVDGPTLMSEAATN------VAEPESTREALKVEAK 115

Query: 61  VAAVNGPENVMSKHLSST 79
              +  P+N+ SK  S T
Sbjct: 116 AKGIK-PKNMDSKAWSFT 126

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TE823.6e-2882.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L2J45.2e-1175.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0041258.17.5e-2882.93hypothetical protein E6C27_scaffold128G002380 [Cucumis melo var. makuwa][more]
KGN56195.11.1e-1075.00hypothetical protein Csa_009969 [Cucumis sativus][more]
XP_038883815.12.9e-0872.73uncharacterized protein LOC120074677 [Benincasa hispida][more]
XP_038895748.16.1e-0646.15uncharacterized protein LOC120083912 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014806.1PI0014806.1mRNA