Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG
mRNA sequence
ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG
Coding sequence (CDS)
ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG
Protein sequence
MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYEAPTDVPDPQEYQQELENQEELGQPRV
Homology
BLAST of PI0009757 vs. ExPASy TrEMBL
Match:
A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
MMMMP FGAGYCDSEV TGY D+ +GP SSYMDVGPS SYM HGHGRG+ EHNEYLY+E
Sbjct: 49 MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRV 132
BLAST of PI0009757 vs. ExPASy TrEMBL
Match:
A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM HGHGRG+ +HNEYLY+E
Sbjct: 55 MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRV 138
BLAST of PI0009757 vs. ExPASy TrEMBL
Match:
A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM HGHGRG+ +HNEYLY+E
Sbjct: 1 MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRV 84
BLAST of PI0009757 vs. ExPASy TrEMBL
Match:
A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 66/86 (76.74%), Postives = 69/86 (80.23%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H G EHNEYLY+E
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYG--EHNEYLYHE 176
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
APT+V D QEYQQE ENQEEL Q RV
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRV 200
BLAST of PI0009757 vs. ExPASy TrEMBL
Match:
A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)
HSP 1 Score: 124.0 bits (310), Expect = 3.0e-25
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDSEV GY D+ VGP SSYMDVGPSTSYM +GHGRG+ EHNEYLY+E
Sbjct: 398 MTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHE 457
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
APTDV D QEYQQE +NQE+ Q RV
Sbjct: 458 APTDVSDRQEYQQEPKNQEDREQHRV 481
BLAST of PI0009757 vs. NCBI nr
Match:
KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
MMMMP FGAGYCDSEV TGY D+ +GP SSYMDVGPS SYM HGHGRG+ EHNEYLY+E
Sbjct: 49 MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRV 132
BLAST of PI0009757 vs. NCBI nr
Match:
TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 127.1 bits (318), Expect = 7.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM HGHGRG+ +HNEYLY+E
Sbjct: 55 MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRV 138
BLAST of PI0009757 vs. NCBI nr
Match:
KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 127.1 bits (318), Expect = 7.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM HGHGRG+ +HNEYLY+E
Sbjct: 1 MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
AP DV D QEYQQE ENQE+ Q RV
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRV 84
BLAST of PI0009757 vs. NCBI nr
Match:
KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 66/86 (76.74%), Postives = 69/86 (80.23%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H G EHNEYLY+E
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYG--EHNEYLYHE 176
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
APT+V D QEYQQE ENQEEL Q RV
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRV 200
BLAST of PI0009757 vs. NCBI nr
Match:
TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 124.0 bits (310), Expect = 6.2e-25
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0
Query: 1 MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
M MMP FGAGYCDSEV GY D+ VGP SSYMDVGPSTSYM +GHGRG+ EHNEYLY+E
Sbjct: 398 MTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHE 457
Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
APTDV D QEYQQE +NQE+ Q RV
Sbjct: 458 APTDVSDRQEYQQEPKNQEDREQHRV 481
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CXX3 | 1.2e-26 | 75.58 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5D3BMS3 | 3.5e-26 | 74.42 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5A7U3Y0 | 3.5e-26 | 74.42 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5A7SLF8 | 6.0e-26 | 76.74 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5D3DJV7 | 3.0e-25 | 74.42 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0049532.1 | 2.5e-26 | 75.58 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| TYK01111.1 | 7.3e-26 | 74.42 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| KAA0048355.1 | 7.3e-26 | 74.42 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| KAA0025972.1 | 1.2e-25 | 76.74 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| TYK23842.1 | 6.2e-25 | 74.42 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
