PI0009757.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0009757.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr09: 10268714 .. 10268974 (+)
Sequence length	261
RNA-Seq Expression	PI0009757.1
Synteny	PI0009757.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG

mRNA sequence

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG

Coding sequence (CDS)

ATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCACAGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACTAGAGAATCAAGAAGAGCTAGGGCAACCAAGAGTTTAG

Protein sequence

MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYEAPTDVPDPQEYQQELENQEELGQPRV

Homology

[Close]

BLAST of PI0009757.1 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           MMMMP FGAGYCDSEV TGY D+ +GP SSYMDVGPS SYM  HGHGRG+ EHNEYLY+E
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           AP DV D QEYQQE ENQE+  Q RV
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRV 132

[Close]

BLAST of PI0009757.1 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM  HGHGRG+ +HNEYLY+E
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           AP DV D QEYQQE ENQE+  Q RV
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRV 138

[Close]

BLAST of PI0009757.1 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1  MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
          M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM  HGHGRG+ +HNEYLY+E
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60

Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
          AP DV D QEYQQE ENQE+  Q RV
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRV 84

[Close]

BLAST of PI0009757.1 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 66/86 (76.74%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H  G  EHNEYLY+E
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYG--EHNEYLYHE 176

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           APT+V D QEYQQE ENQEEL Q RV
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRV 200

[Close]

BLAST of PI0009757.1 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.0e-25
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M MMP FGAGYCDSEV  GY D+ VGP SSYMDVGPSTSYM  +GHGRG+ EHNEYLY+E
Sbjct: 398 MTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHE 457

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           APTDV D QEYQQE +NQE+  Q RV
Sbjct: 458 APTDVSDRQEYQQEPKNQEDREQHRV 481

[Close]

BLAST of PI0009757.1 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           MMMMP FGAGYCDSEV TGY D+ +GP SSYMDVGPS SYM  HGHGRG+ EHNEYLY+E
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYM--HGHGRGYGEHNEYLYHE 108

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           AP DV D QEYQQE ENQE+  Q RV
Sbjct: 109 APADVSDRQEYQQEPENQEDREQHRV 132

[Close]

BLAST of PI0009757.1 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 7.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM  HGHGRG+ +HNEYLY+E
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 114

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           AP DV D QEYQQE ENQE+  Q RV
Sbjct: 115 APADVSDRQEYQQEPENQEDREQHRV 138

[Close]

BLAST of PI0009757.1 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 7.3e-26
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1  MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
          M MMP FGAGYCDS++GTGY D+ VGPSSSYMDV PSTSYM  HGHGRG+ +HNEYLY+E
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYM--HGHGRGYGKHNEYLYHE 60

Query: 61 APTDVPDPQEYQQELENQEELGQPRV 87
          AP DV D QEYQQE ENQE+  Q RV
Sbjct: 61 APADVSDRQEYQQEPENQEDREQHRV 84

[Close]

BLAST of PI0009757.1 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 66/86 (76.74%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H  G  EHNEYLY+E
Sbjct: 117 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYG--EHNEYLYHE 176

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           APT+V D QEYQQE ENQEEL Q RV
Sbjct: 177 APTEVSDRQEYQQEPENQEELEQHRV 200

[Close]

BLAST of PI0009757.1 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 6.2e-25
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1   MMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGRGHREHNEYLYYE 60
           M MMP FGAGYCDSEV  GY D+ VGP SSYMDVGPSTSYM  +GHGRG+ EHNEYLY+E
Sbjct: 398 MTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYM--YGHGRGYGEHNEYLYHE 457

Query: 61  APTDVPDPQEYQQELENQEELGQPRV 87
           APTDV D QEYQQE +NQE+  Q RV
Sbjct: 458 APTDVSDRQEYQQEPKNQEDREQHRV 481

The following BLAST results are available for this feature:

BLAST of PI0009757.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009757.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXX3	1.2e-26	75.58	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3BMS3	3.5e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U3Y0	3.5e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7SLF8	6.0e-26	76.74	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3DJV7	3.0e-25	74.42	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0009757.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049532.1	2.5e-26	75.58	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	7.3e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0048355.1	7.3e-26	74.42	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0025972.1	1.2e-25	76.74	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK23842.1	6.2e-25	74.42	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of PI0009757.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..86

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0009757	PI0009757	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0009757.1-exon	PI0009757.1-exon-chr09:10268714..10268974	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0009757.1-cds	PI0009757.1-cds-chr09:10268714..10268974	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0009757.1	PI0009757.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance