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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCTAACCACTATTTTAAGCTGGATGAGCTTTCACGATCATCCCTGACTATGCAAGTCAAGGCAACAAACCATGTGTATCATCAACTTTATGGCATATCCAGGGTTCCACCAGCAAAGACAGGCATGTAGTGAATTGCTTCAGAGTTGCAAACACGCACACGGTAGTGAACCCAGAGGATGGTTCTCAAAATTTATGTCCTGAATGCCACTAAAGAAGTCTATCTTCTACAACTATACTACTTCACAACCACCGGTATTCAAGCAAGTAGCTACCAATTTGGCTACAAGCTGGAACGCATTCTGAAGGGAATTCATCTTATCTTTATGTGCAAAATCAATATACCCTGATTCTCATACGGGAGTGAGATATCAGAGAATGAAAAACAGAGGAAATATCAGGGATAAAATGAAGCTGTTCAATTAAAAAGAATGTTAAAACTTAAAAGGAAAGGCCTCACTATCGTCTCCCGGCCTCCGTGTTCGATTAACTGTAGATTCGGCCAGCAAAACACGCTCGGAAAACCCTCATCTTTGAGGGAATCGGTTGAGATGCAGAAAGATAAAGAAGGTATACCTCAAGAATAA mRNA sequence ATGCCTAACCACTATTTTAAGCTGGATGAGCTTTCACGATCATCCCTGACTATGCAAGTCAAGGCAACAAACCATGTGTATCATCAACTTTATGGCATATCCAGGGTTCCACCAGCAAAGACAGGCATGATGGTTCTCAAAATTTATGTCCTGAATGCCACTAAAGAAGTCTATCTTCTACAACTATACTACTTCACAACCACCGGTATTCAAGCAAGTAGCTACCAATTTGGCTACAAGCTGGAACGCATTCTGAAGGGAATTCATCTTATCTTTATGAAAGGCCTCACTATCGTCTCCCGGCCTCCGTGTTCGATTAACTGTAGATTCGGCCAGCAAAACACGCTCGGAAAACCCTCATCTTTGAGGGAATCGGTTGAGATGCAGAAAGATAAAGAAGGTATACCTCAAGAATAA Coding sequence (CDS) ATGCCTAACCACTATTTTAAGCTGGATGAGCTTTCACGATCATCCCTGACTATGCAAGTCAAGGCAACAAACCATGTGTATCATCAACTTTATGGCATATCCAGGGTTCCACCAGCAAAGACAGGCATGATGGTTCTCAAAATTTATGTCCTGAATGCCACTAAAGAAGTCTATCTTCTACAACTATACTACTTCACAACCACCGGTATTCAAGCAAGTAGCTACCAATTTGGCTACAAGCTGGAACGCATTCTGAAGGGAATTCATCTTATCTTTATGAAAGGCCTCACTATCGTCTCCCGGCCTCCGTGTTCGATTAACTGTAGATTCGGCCAGCAAAACACGCTCGGAAAACCCTCATCTTTGAGGGAATCGGTTGAGATGCAGAAAGATAAAGAAGGTATACCTCAAGAATAA Protein sequence MPNHYFKLDELSRSSLTMQVKATNHVYHQLYGISRVPPAKTGMMVLKIYVLNATKEVYLLQLYYFTTTGIQASSYQFGYKLERILKGIHLIFMKGLTIVSRPPCSINCRFGQQNTLGKPSSLRESVEMQKDKEGIPQE
Homology
BLAST of PI0008429 vs. ExPASy TrEMBL
Match: A0A0A0KRK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387440 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.6e-44 Identity = 104/159 (65.41%), Postives = 115/159 (72.33%), Query Frame = 0
Query: 1 MPNHYFKLDELSRSSLT------------MQVKATNHVYHQLYGISRVPPAKTGMMVLKI 60
MPNHYFKL+ELSRSSLT ++ + Y + RV + T MVLKI
Sbjct: 1 MPNHYFKLNELSRSSLTSHGTKAYVSSDLWHIQGSTSKYRRAVNYFRVANSYTQRMVLKI 60
Query: 61 YVLNATKEVYLLQLYYFTTTGIQASSYQFGYKLERILKGIHLIFM---------KGLTIV 120
YVLN T+EVYLLQL YFTTTGIQASSYQFGYKLERILKGI+LI GLT+V
Sbjct: 61 YVLNTTEEVYLLQLSYFTTTGIQASSYQFGYKLERILKGIYLILCAKSIYPNSHTGLTVV 120
Query: 121 SRPPCSINCRFGQQNTLGKPSSLRESVEMQKDKEGIPQE 139
RPPCSINCRFGQQNTLGKPSS+RESVEM+KDKEGIPQE
Sbjct: 121 LRPPCSINCRFGQQNTLGKPSSMRESVEMRKDKEGIPQE 159
BLAST of PI0008429 vs. NCBI nr
Match: KGN50992.1 (hypothetical protein Csa_009144 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 3.3e-44 Identity = 104/159 (65.41%), Postives = 115/159 (72.33%), Query Frame = 0
Query: 1 MPNHYFKLDELSRSSLT------------MQVKATNHVYHQLYGISRVPPAKTGMMVLKI 60
MPNHYFKL+ELSRSSLT ++ + Y + RV + T MVLKI
Sbjct: 1 MPNHYFKLNELSRSSLTSHGTKAYVSSDLWHIQGSTSKYRRAVNYFRVANSYTQRMVLKI 60
Query: 61 YVLNATKEVYLLQLYYFTTTGIQASSYQFGYKLERILKGIHLIFM---------KGLTIV 120
YVLN T+EVYLLQL YFTTTGIQASSYQFGYKLERILKGI+LI GLT+V
Sbjct: 61 YVLNTTEEVYLLQLSYFTTTGIQASSYQFGYKLERILKGIYLILCAKSIYPNSHTGLTVV 120
Query: 121 SRPPCSINCRFGQQNTLGKPSSLRESVEMQKDKEGIPQE 139
RPPCSINCRFGQQNTLGKPSS+RESVEM+KDKEGIPQE
Sbjct: 121 LRPPCSINCRFGQQNTLGKPSSMRESVEMRKDKEGIPQE 159
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KRK5 | 1.6e-44 | 65.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387440 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN50992.1 | 3.3e-44 | 65.41 | hypothetical protein Csa_009144 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 124..138 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 118..138 |
Relationships
The following mRNA feature(s) are a part of this gene:
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