Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACTTTAAAAGGGTAGACAACTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATAGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAGCTATTCATCTTATCTTGTGAGAAAAATGAGACCATAGATAAGAAGGAATTGGAGATTGCTAAGCTCCAAGACGAAGCCAATGCTCTTGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACGGTTCGTAAGAGTATGGAGGCTACACTCGAAGAATTCAGGAACTTCAAGTAG
mRNA sequence
ATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACTTTAAAAGGGTAGACAACTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATAGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAGCTATTCATCTTATCTTGTGAGAAAAATGAGACCATAGATAAGAAGGAATTGGAGATTGCTAAGCTCCAAGACGAAGCCAATGCTCTTGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACGGTTCGTAAGAGTATGGAGGCTACACTCGAAGAATTCAGGAACTTCAAGTAG
Coding sequence (CDS)
ATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACTTTAAAAGGGTAGACAACTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATAGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAGCTATTCATCTTATCTTGTGAGAAAAATGAGACCATAGATAAGAAGGAATTGGAGATTGCTAAGCTCCAAGACGAAGCCAATGCTCTTGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACGGTTCGTAAGAGTATGGAGGCTACACTCGAAGAATTCAGGAACTTCAAGTAG
Protein sequence
MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
Homology
BLAST of PI0006680 vs. ExPASy TrEMBL
Match:
A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 740 MRTPFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLS 799
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKE L L+ QL+ DAKVIQER +LSLE+KELE RL+SIN ESEQL
Sbjct: 800 TDKARQLNEKTSAIKEVLTLVKQLRGDAKVIQERTAELSLERKELEKRLRSINAESEQLS 859
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATVR+SMEA EEF+NFK
Sbjct: 860 ILSCEKAEAIDQQELEVAKLQDEVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFK 918
BLAST of PI0006680 vs. ExPASy TrEMBL
Match:
A0A5D3BW91 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001500 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 4.3e-66
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRT FEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 331 MRTSFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLS 390
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER +LSLE+KELE RLQSIN ESEQL
Sbjct: 391 TDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERTAELSLERKELEKRLQSINAESEQLS 450
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++ELE+AKLQDE N LESTPAI EEA EALAT+R+SMEAT EEF+NFK
Sbjct: 451 ILSCEKAEAIDQQELEVAKLQDEVNTLESTPAIIEEAIEALATIRQSMEATREEFKNFK 509
BLAST of PI0006680 vs. ExPASy TrEMBL
Match:
A0A5A7V3X5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00140 PE=4 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 142/179 (79.33%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI + LTPLEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 310 MRTPFEYIPRLRPEIATVLSGIEKIHTNGLTPLEEYLNSYLKRVDNFNDVQSSYSAQLLS 369
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQLDEKTSAI+EAL L+++L+EDA VIQERA QLSLEKKELE RLQS+N ESEQL
Sbjct: 370 TDKARQLDEKTSAIEEALTLMEKLREDANVIQERAMQLSLEKKELERRLQSLNAESEQLS 429
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E I ++ELE+AKLQDE N LE TPAITEE EALA VR+SMEA EEF+NFK
Sbjct: 430 ILSCEKIEAIYQQELEVAKLQDEVNTLEGTPAITEEVIEALAMVRRSMEAAREEFKNFK 488
BLAST of PI0006680 vs. ExPASy TrEMBL
Match:
A0A5A7U8X8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002060 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 4.7e-65
Identity = 144/179 (80.45%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQL L
Sbjct: 648 MRTPFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLSL 707
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER +LSLE+KELE RLQSIN ESEQL
Sbjct: 708 TDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERTVELSLERKELEKRLQSINAESEQLS 767
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILS EK E ID++ELE+AKLQDE N LESTPAI EEA EALATVR+SMEA EEF+NFK
Sbjct: 768 ILSYEKAEAIDQQELEVAKLQDEVNTLESTPAIIEEAIEALATVRQSMEAAGEEFKNFK 826
BLAST of PI0006680 vs. ExPASy TrEMBL
Match:
A0A5A7TYW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00180 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 8.1e-65
Identity = 142/179 (79.33%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYS QLL
Sbjct: 563 MRTPFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSPQLLS 622
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDKTRQL+EKTSAIKEAL L+ +L+ D KVIQER +LSLE+KELE RL+SIN ESEQL
Sbjct: 623 TDKTRQLNEKTSAIKEALTLVKKLRGDVKVIQERTAELSLERKELEKRLRSINDESEQLS 682
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATV +SMEA EEF+NFK
Sbjct: 683 ILSCEKAEAIDQQELEVAKLQDEVNTLESTPAITEEAIEALATVCQSMEAAREEFKNFK 741
BLAST of PI0006680 vs. NCBI nr
Match:
KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 261.5 bits (667), Expect = 5.2e-66
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 740 MRTPFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLS 799
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKE L L+ QL+ DAKVIQER +LSLE+KELE RL+SIN ESEQL
Sbjct: 800 TDKARQLNEKTSAIKEVLTLVKQLRGDAKVIQERTAELSLERKELEKRLRSINAESEQLS 859
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATVR+SMEA EEF+NFK
Sbjct: 860 ILSCEKAEAIDQQELEVAKLQDEVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFK 918
BLAST of PI0006680 vs. NCBI nr
Match:
TYK03767.1 (hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa])
HSP 1 Score: 260.8 bits (665), Expect = 8.8e-66
Identity = 144/179 (80.45%), Postives = 155/179 (86.59%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRT FEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 331 MRTSFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLS 390
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER +LSLE+KELE RLQSIN ESEQL
Sbjct: 391 TDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERTAELSLERKELEKRLQSINAESEQLS 450
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++ELE+AKLQDE N LESTPAI EEA EALAT+R+SMEAT EEF+NFK
Sbjct: 451 ILSCEKAEAIDQQELEVAKLQDEVNTLESTPAIIEEAIEALATIRQSMEATREEFKNFK 509
BLAST of PI0006680 vs. NCBI nr
Match:
KAA0060431.1 (hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa] >TYK18520.1 hypothetical protein E5676_scaffold119G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 257.7 bits (657), Expect = 7.5e-65
Identity = 142/179 (79.33%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI + LTPLEEYLNSY KRVDNFNDVQSSYSAQLL
Sbjct: 310 MRTPFEYIPRLRPEIATVLSGIEKIHTNGLTPLEEYLNSYLKRVDNFNDVQSSYSAQLLS 369
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQLDEKTSAI+EAL L+++L+EDA VIQERA QLSLEKKELE RLQS+N ESEQL
Sbjct: 370 TDKARQLDEKTSAIEEALTLMEKLREDANVIQERAMQLSLEKKELERRLQSLNAESEQLS 429
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E I ++ELE+AKLQDE N LE TPAITEE EALA VR+SMEA EEF+NFK
Sbjct: 430 ILSCEKIEAIYQQELEVAKLQDEVNTLEGTPAITEEVIEALAMVRRSMEAAREEFKNFK 488
BLAST of PI0006680 vs. NCBI nr
Match:
KAA0052363.1 (hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa])
HSP 1 Score: 257.3 bits (656), Expect = 9.8e-65
Identity = 144/179 (80.45%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQL L
Sbjct: 648 MRTPFEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLSL 707
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER +LSLE+KELE RLQSIN ESEQL
Sbjct: 708 TDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERTVELSLERKELEKRLQSINAESEQLS 767
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILS EK E ID++ELE+AKLQDE N LESTPAI EEA EALATVR+SMEA EEF+NFK
Sbjct: 768 ILSYEKAEAIDQQELEVAKLQDEVNTLESTPAIIEEAIEALATVRQSMEAAGEEFKNFK 826
BLAST of PI0006680 vs. NCBI nr
Match:
TYK06376.1 (hypothetical protein E5676_scaffold163G00680 [Cucumis melo var. makuwa])
HSP 1 Score: 256.5 bits (654), Expect = 1.7e-64
Identity = 140/179 (78.21%), Postives = 155/179 (86.59%), Query Frame = 0
Query: 1 MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLL 60
MRTPFEYIPRLRPEIA VLSGI KI AD+LTPLEEYLNSY KRVDNFNDVQSSY AQLL
Sbjct: 1 MRTPFEYIPRLRPEIATVLSGIEKIHADDLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLS 60
Query: 61 TDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQSINTESEQLF 120
TDK RQL+EKTS IKEAL L++QL+ED KVIQER +LSLE+KEL+ RLQSIN ESEQL
Sbjct: 61 TDKARQLNEKTSVIKEALTLVEQLREDVKVIQERTAELSLERKELKKRLQSINAESEQLS 120
Query: 121 ILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK 180
ILSCEK E ID++EL+I KLQD+ N LESTPAITEEA EALAT+ KSM+A EEF+NFK
Sbjct: 121 ILSCEKAEAIDQQELKIFKLQDKVNTLESTPAITEEAIEALATICKSMKAAREEFKNFK 179
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VHW8 | 2.5e-66 | 80.45 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5D3BW91 | 4.3e-66 | 80.45 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7V3X5 | 3.6e-65 | 79.33 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A5A7U8X8 | 4.7e-65 | 80.45 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A5A7TYW3 | 8.1e-65 | 79.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0065375.1 | 5.2e-66 | 80.45 | hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa] | [more] |
| TYK03767.1 | 8.8e-66 | 80.45 | hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa] | [more] |
| KAA0060431.1 | 7.5e-65 | 79.33 | hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa] >TYK1852... | [more] |
| KAA0052363.1 | 9.8e-65 | 80.45 | hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa] | [more] |
| TYK06376.1 | 1.7e-64 | 78.21 | hypothetical protein E5676_scaffold163G00680 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
