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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA mRNA sequence ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA Coding sequence (CDS) ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA Protein sequence MGSFQAYEEKKKKKKGINDQLLKSRVDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIELKENKLH
Homology
BLAST of PI0006266 vs. ExPASy TrEMBL
Match: A0A5D3DZJ9 (Lectin receptor kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00040 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0
Query: 31 MEELIPIIVVNKDEKDEE-EEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQ 88
+EEL+PII NKD E++++DKD++G MKTTTIT+KED ETQ KVVDKATQDQ
Sbjct: 17 VEELVPIIKANKDGNVVNIEDEEEDKDVLGGSMKTTTITAKEDGETQKKVVDKATQDQ 74
BLAST of PI0006266 vs. ExPASy TrEMBL
Match: A0A6D2KBA3 (DUF4219 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS32667 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 1 MGSFQAYEEKKKKKK-GINDQLLKSR-VDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLI 60
+GS QAYEEKKKKKK I ++ SR V + ++++ I K E+E +D + D +
Sbjct: 162 LGSLQAYEEKKKKKKEDIAEKTKYSRCVSIMIKKKVVETIQDKAGVKHEDEVEDMETDEV 221
Query: 61 GYPMKTTTITSKEDQETQH-KVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIEL 120
G MK T+ +ET H + +++ Q+QG I+Q NA IV+SL IM NVEL IEL
Sbjct: 222 GDQMK----TAPTKEETIHQEAMEEEVQNQGTISQASNATIVESLDIMLPNVELQTTIEL 280
BLAST of PI0006266 vs. NCBI nr
Match: KAA0040440.1 (lectin receptor kinase [Cucumis melo var. makuwa] >TYK28888.1 lectin receptor kinase [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 4.9e-07 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0
Query: 31 MEELIPIIVVNKDEKDEE-EEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQ 88
+EEL+PII NKD E++++DKD++G MKTTTIT+KED ETQ KVVDKATQDQ
Sbjct: 17 VEELVPIIKANKDGNVVNIEDEEEDKDVLGGSMKTTTITAKEDGETQKKVVDKATQDQ 74
BLAST of PI0006266 vs. NCBI nr
Match: CAA7045432.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 58.9 bits (141), Expect = 3.5e-05 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 1 MGSFQAYEEKKKKKK-GINDQLLKSR-VDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLI 60
+GS QAYEEKKKKKK I ++ SR V + ++++ I K E+E +D + D +
Sbjct: 162 LGSLQAYEEKKKKKKEDIAEKTKYSRCVSIMIKKKVVETIQDKAGVKHEDEVEDMETDEV 221
Query: 61 GYPMKTTTITSKEDQETQH-KVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIEL 120
G MK T+ +ET H + +++ Q+QG I+Q NA IV+SL IM NVEL IEL
Sbjct: 222 GDQMK----TAPTKEETIHQEAMEEEVQNQGTISQASNATIVESLDIMLPNVELQTTIEL 280
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DZJ9 | 2.4e-07 | 63.79 | Lectin receptor kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
| A0A6D2KBA3 | 1.7e-05 | 41.46 | DUF4219 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_L... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0040440.1 | 4.9e-07 | 63.79 | lectin receptor kinase [Cucumis melo var. makuwa] >TYK28888.1 lectin receptor ki... | [more] |
| CAA7045432.1 | 3.5e-05 | 41.46 | unnamed protein product [Microthlaspi erraticum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0016310 |
phosphorylation |
| molecular_function |
GO:0016301 |
kinase activity |
| molecular_function |
GO:0003676 |
nucleic acid binding |
|
