PI0006266 (gene) Melon (PI 482460) v1

Overview
NamePI0006266
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionLectin receptor kinase
Locationchr09: 13958914 .. 13959285 (+)
RNA-Seq ExpressionPI0006266
SyntenyPI0006266
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA

mRNA sequence

ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA

Coding sequence (CDS)

ATGGGTTCGTTTCAAGCATATGAAGAAAAGAAAAAGAAGAAGAAAGGAATCAATGATCAATTGCTCAAGTCGCGAGTTGATTTGAGACCAATGGAGGAGTTAATCCCAATAATAGTAGTGAACAAAGACGAGAAGGATGAGGAAGAGGAAAAGGACAAGGACAAGGACTTGATTGGATACCCAATGAAGACAACAACAATAACTTCCAAAGAGGATCAAGAAACTCAACATAAGGTCGTGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATGCTATAATTGTCAAAAGTTTGGTCATTATGCATTCGAACGTAGAGCTCCTAGAAATAATAGAGTTGAAAGAAAACAAACTACATTGA

Protein sequence

MGSFQAYEEKKKKKKGINDQLLKSRVDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIELKENKLH
Homology
[Close]
BLAST of PI0006266 vs. ExPASy TrEMBL
Match: A0A5D3DZJ9 (Lectin receptor kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00040 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 31 MEELIPIIVVNKDEKDEE-EEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQ 88
          +EEL+PII  NKD      E++++DKD++G  MKTTTIT+KED ETQ KVVDKATQDQ
Sbjct: 17 VEELVPIIKANKDGNVVNIEDEEEDKDVLGGSMKTTTITAKEDGETQKKVVDKATQDQ 74

[Close]
BLAST of PI0006266 vs. ExPASy TrEMBL
Match: A0A6D2KBA3 (DUF4219 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS32667 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 0 

Query: 1   MGSFQAYEEKKKKKK-GINDQLLKSR-VDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLI 60
           +GS QAYEEKKKKKK  I ++   SR V +   ++++  I      K E+E +D + D +
Sbjct: 162 LGSLQAYEEKKKKKKEDIAEKTKYSRCVSIMIKKKVVETIQDKAGVKHEDEVEDMETDEV 221

Query: 61  GYPMKTTTITSKEDQETQH-KVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIEL 120
           G  MK    T+   +ET H + +++  Q+QG I+Q  NA IV+SL IM  NVEL   IEL
Sbjct: 222 GDQMK----TAPTKEETIHQEAMEEEVQNQGTISQASNATIVESLDIMLPNVELQTTIEL 280

[Close]
BLAST of PI0006266 vs. NCBI nr
Match: KAA0040440.1 (lectin receptor kinase [Cucumis melo var. makuwa] >TYK28888.1 lectin receptor kinase [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 4.9e-07
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 31 MEELIPIIVVNKDEKDEE-EEKDKDKDLIGYPMKTTTITSKEDQETQHKVVDKATQDQ 88
          +EEL+PII  NKD      E++++DKD++G  MKTTTIT+KED ETQ KVVDKATQDQ
Sbjct: 17 VEELVPIIKANKDGNVVNIEDEEEDKDVLGGSMKTTTITAKEDGETQKKVVDKATQDQ 74

[Close]
BLAST of PI0006266 vs. NCBI nr
Match: CAA7045432.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 58.9 bits (141), Expect = 3.5e-05
Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 0 

Query: 1   MGSFQAYEEKKKKKK-GINDQLLKSR-VDLRPMEELIPIIVVNKDEKDEEEEKDKDKDLI 60
           +GS QAYEEKKKKKK  I ++   SR V +   ++++  I      K E+E +D + D +
Sbjct: 162 LGSLQAYEEKKKKKKEDIAEKTKYSRCVSIMIKKKVVETIQDKAGVKHEDEVEDMETDEV 221

Query: 61  GYPMKTTTITSKEDQETQH-KVVDKATQDQGMINQTLNAIIVKSLVIMHSNVELLEIIEL 120
           G  MK    T+   +ET H + +++  Q+QG I+Q  NA IV+SL IM  NVEL   IEL
Sbjct: 222 GDQMK----TAPTKEETIHQEAMEEEVQNQGTISQASNATIVESLDIMLPNVELQTTIEL 280

The following BLAST results are available for this feature:
BLAST of PI0006266 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006266 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DZJ92.4e-0763.79Lectin receptor kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A6D2KBA31.7e-0541.46DUF4219 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_L... [more]
BLAST of PI0006266 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040440.14.9e-0763.79lectin receptor kinase [Cucumis melo var. makuwa] >TYK28888.1 lectin receptor ki... [more]
CAA7045432.13.5e-0541.46unnamed protein product [Microthlaspi erraticum][more]
BLAST of PI0006266 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006266.1PI0006266.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding