Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG
mRNA sequence
ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG
Coding sequence (CDS)
ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG
Protein sequence
MMLQAIHTLVLKKLMKKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGDLDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL
Homology
BLAST of PI0005901 vs. ExPASy TrEMBL
Match:
A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. ExPASy TrEMBL
Match:
A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275
BLAST of PI0005901 vs. ExPASy TrEMBL
Match:
A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. ExPASy TrEMBL
Match:
A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. ExPASy TrEMBL
Match:
A0A5D3C5P0 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001280 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKK+V RKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTSSKK D
Sbjct: 71 KGKSKKQVHRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSSKKDD 130
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 131 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 185
BLAST of PI0005901 vs. NCBI nr
Match:
TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. NCBI nr
Match:
TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275
BLAST of PI0005901 vs. NCBI nr
Match:
TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. NCBI nr
Match:
KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKKR RRKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89 KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203
BLAST of PI0005901 vs. NCBI nr
Match:
KAA0037002.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK06650.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 16 KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
K KSKK+V RKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTSSKK D
Sbjct: 71 KGKSKKQVHRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSSKKDD 130
Query: 76 LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
L EELMEC IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 131 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 185
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BNQ5 | 4.8e-43 | 78.26 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3DBS2 | 4.8e-43 | 78.26 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3C535 | 4.8e-43 | 78.26 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| A0A5A7V5Z1 | 1.4e-42 | 77.39 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| A0A5D3C5P0 | 1.8e-42 | 77.39 | L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYJ96795.1 | 1.0e-42 | 78.26 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T... | [more] |
| TYK21097.1 | 1.0e-42 | 78.26 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
| TYK06268.1 | 1.0e-42 | 78.26 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
| KAA0061221.1 | 2.9e-42 | 77.39 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] | [more] |
| KAA0037002.1 | 3.8e-42 | 77.39 | L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
