PI0005901.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0005901.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	chr09: 16459893 .. 16460285 (+)
Sequence length	393
RNA-Seq Expression	PI0005901.1
Synteny	PI0005901.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG

mRNA sequence

ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG

Coding sequence (CDS)

ATGATGTTGCAAGCAATACATACTTTGGTGTTGAAGAAACTGATGAAGAAAAAAAGCAAAAAACGAGTTCGAAGAAAGAAGGACGAATTTGACAGTTTCTTTTCTACATTCATAGATATGTATGTTGAGAATGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTGGTTCTACATCTAGTCAAATTGATAAGGGTCAAACATCAAGCAAAAAAGGTGATCTCGATGAAGAGTTGATGGAATGTTTTAGAATTTTACATACAATGGAGGATATTGATGGAGAGGCTTATACCAAAGTACTGAAACTCTTGCATGGAGATGTTTCTTGGAGAAAACTATTTTTGCTCATGTCCGATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAG

Protein sequence

MMLQAIHTLVLKKLMKKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGDLDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL

Homology

[Close]

BLAST of PI0005901.1 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. ExPASy TrEMBL
Match: A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275

[Close]

BLAST of PI0005901.1 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. ExPASy TrEMBL
Match: A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. ExPASy TrEMBL
Match: A0A5D3C5P0 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001280 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKK+V RKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTSSKK D
Sbjct: 71  KGKSKKQVHRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSSKKDD 130

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 131 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 185

[Close]

BLAST of PI0005901.1 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. NCBI nr
Match: TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275

[Close]

BLAST of PI0005901.1 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKDEF SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKKR RRKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTS+KK D
Sbjct: 89  KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of PI0005901.1 vs. NCBI nr
Match: KAA0037002.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK06650.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 89/115 (77.39%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 16  KKKSKKRVRRKKDEFDSFFSTFIDMYVENAKRKNDILEKRSFGSTSSQIDKGQTSSKKGD 75
           K KSKK+V RKKD+F SFFS+F+D+Y ENAKRKNDILEKRSFG TSSQ+D+ QTSSKK D
Sbjct: 71  KGKSKKQVHRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSSKKDD 130

Query: 76  LDEELMECFRILHTMEDIDGEAYTKVLKLLHGDVSWRKLFLLMSDSRKKDFINSL 131
           L EELMEC  IL+TMED+DGEAY+K+LKLLHGD++WRKLFL M DSRK+DFINSL
Sbjct: 131 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 185

The following BLAST results are available for this feature:

BLAST of PI0005901.1 vs.


Match Name	E-value	Identity	Description

BLAST of PI0005901.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNQ5	4.8e-43	78.26	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3DBS2	4.8e-43	78.26	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	4.8e-43	78.26	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V5Z1	1.4e-42	77.39	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C5P0	1.8e-42	77.39	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of PI0005901.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96795.1	1.0e-42	78.26	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
TYK21097.1	1.0e-42	78.26	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK06268.1	1.0e-42	78.26	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0061221.1	2.9e-42	77.39	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0037002.1	3.8e-42	77.39	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]

BLAST of PI0005901.1 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0005901	PI0005901	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005901.1-exon	PI0005901.1-exon-chr09:16459893..16460285	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0005901.1-cds	PI0005901.1-cds-chr09:16459893..16460285	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0005901.1	PI0005901.1-protein	polypeptide