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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGACAAGGAATTTTAGGACCATTATAGTTACGGCACCAGGACTTTGGTCGCCAGGTCCCTGTCATCTGGTCACCTACTTCCCGGACCTTCTAGCACTGGACAGACGTTATATACAGTCTTGCAATTTTGCAAAGTTCTCTGTTTTTGGTTGGTAAACAGTCGCCCGGCCGGGTTACTGCAACCTCTTCTTCCATGTCAAAGCTGTTATTGTATCCAATTGGAAAACTGATGGATGCAAGGAAATTTGTCAGGTAACTCATACAGCTGATTTAGTAACTTTAAATGATCATTGAAGTCCATTAAATGTTGTGAGTTTATCTTTAATTTCAATGGAATTGATGATCGTAGTAGTTTTTATTAGCTTGAAACATCACCATGCCATAACATAACCTATCCTATTTATGGCGGATGAAAAAATGGTAGAGGATGTAGAGGAGTATCACAATAACTTATAAAATCGTTAGTTGAAAACATCTAAGGCCTTCTGCTTGAAGGTTCAAGGCTAA mRNA sequence ATGACAAGGAATTTTAGGACCATTATAGTTACGGCACCAGGACTTTGGTCGCCAGGTCCCTTCGCCCGGCCGGGTTACTGCAACCTCTTCTTCCATGTCAAAGCTGTTATTGTATCCAATTGGAAAACTGATGGATGCAAGGAAATTTGTCAGGTTCAAGGCTAA Coding sequence (CDS) ATGACAAGGAATTTTAGGACCATTATAGTTACGGCACCAGGACTTTGGTCGCCAGGTCCCTTCGCCCGGCCGGGTTACTGCAACCTCTTCTTCCATGTCAAAGCTGTTATTGTATCCAATTGGAAAACTGATGGATGCAAGGAAATTTGTCAGGTTCAAGGCTAA Protein sequence MTRNFRTIIVTAPGLWSPGPFARPGYCNLFFHVKAVIVSNWKTDGCKEICQVQG
Homology
BLAST of PI0005245 vs. ExPASy TrEMBL
Match: A0A0A0L7G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122410 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11 Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 1 MTRNFRTIIVTAPGLWSPGPFA----RP-GYCNLFFHVKAVIVSNWKTDGCKEICQVQG 55 M RNF T+ + G PGP + RP G+CNLFFHV AVIVS+WKTDGCKEICQVQG Sbjct: 1 MKRNFATLGPLSSGHLLPGPSSTGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG 59
BLAST of PI0005245 vs. NCBI nr
Match: KGN56517.1 (hypothetical protein Csa_011570 [Cucumis sativus]) HSP 1 Score: 78.2 bits (191), Expect = 2.4e-11 Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 1 MTRNFRTIIVTAPGLWSPGPFA----RP-GYCNLFFHVKAVIVSNWKTDGCKEICQVQG 55 M RNF T+ + G PGP + RP G+CNLFFHV AVIVS+WKTDGCKEICQVQG Sbjct: 1 MKRNFATLGPLSSGHLLPGPSSTGQIRPVGHCNLFFHVNAVIVSDWKTDGCKEICQVQG 59
BLAST of PI0005245 vs. NCBI nr
Match: XP_031738549.1 (16 kDa phloem protein 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0 Query: 22 ARP-GYCNLFFHVKAVIVSNWKTDGCKEICQ 52 +RP G+CNLFFHV AVIVS+WKTDGCKEICQ Sbjct: 16 SRPVGHCNLFFHVNAVIVSDWKTDGCKEICQ 46
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L7G8 | 1.2e-11 | 64.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122410 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN56517.1 | 2.4e-11 | 64.41 | hypothetical protein Csa_011570 [Cucumis sativus] | [more] |
XP_031738549.1 | 1.8e-06 | 83.87 | 16 kDa phloem protein 2 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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