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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCAATTGAACAAAAAAATTTGGTATGGTAAAAGAGATTGTATATAGAATGTCATGTGATTCTATCGTGTCGCAAAATTACTATGGTAAATCAAATTTTATTTAATCTTTTATCCACTGATTAGTCCACTCTTTTACATTCCGCTATACATTATCGTAACAAGTTGAACTCATATATTAATTATTCATTTAAGGAAAAATCACAGTTAAATGATATACACGATAATTTATGGCTAAAATTTAAACAAAAACAATCTTATCACAGTTCAATAAAAGGTCGTTTACTTTTTACATTACCATTTTTTACAAACTTTCAATGTACCAATAAGCAACACATTGTATAGATCAAAATGATCCGTATCATATGATTCTTTTTCATTTAATTTTTTAAAATTTTTTGAAAAATTGAAACTATTTACCATGAGAATTTTTCTTTAAGATGTATAATCCTTTTAAATGAATTATAGACAATAAAATCTATCAAAATAATATCTTATAGATTTCGAAAAATATTAACCTTTTGATTAAATGAAGAATAACATAAAAGAATAATACCTAAAAAAGATTAAAAATGGAAATAAATAATAATAAAAAATATTTTGATCAAAATATATTCACTCTCTCTCAGTCTTTCATATATATCTTTAAGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTACAATTTCGATCACCGATAAAAGCATCAGCCGTGAGAGTTGTGTTCCGCCGTCGACGGAGAAGTTTTCTTCCTCACAAACTCCCGTATTTTTTCATCGTGCTTTTGGAATTTCGCGAGTCTTCGGTTTGCAGCGCTAAGGTACTATGAAATATAACATAGTATTCTCTTGTCTGATCGTAAATCCGTCTTTACATTCGTGATTTTTGATCTCGTTCTTCATCGCATTCGCTTTGGCTTTCGTATTTTTTGGCTGATAAAAGAGGACTAGTTACGACTTACGAGCTTACTAGAGAAACTTAGTTATGTGTTCAAGATTGTCTAGCATATATGATAGAAATTTTATTTGTCAATGGTGGTTTAATCCGTGGAGTTTTCGGGTCCTGTGTTAGTCTAGGAGCAGTAAAGGTTCGTTTATTTTTGTTCAAATTGACGGTGAATATAGTTTATTTTATATTTAGCTCTTATGGTTTGAGACAGACAATTCTCGGTGGAATGTTCCAATTTCTATCTGATTATCCTGTGAGTCGTGGATTGGAATGTTCACCTCTGAGTGCTTTTCACTCTATTGAAGTGAAATTGTTAGTGTTGAGCTAAAATACTGTTTGTTATCGTGTCTTTTATTTAATTTTTTCTTGCTGTGTAGTTTGGTTCTGATCATTGGTAATATGTAAATTGTTGGAGCACAAAAAGTTAGTCAATCTTATGCAATGTTGGATCTCTTGATTATGTAGGGGGGTGTTTACTCTATTAGAGCTAATAAATGA mRNA sequence ATGTCAATTGAACAAAAAAATTTGGTATGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTACAATTTCGATCACCGATAAAAGCATCAGCCGTGAGAGTTGTGTTCCGCCGTCGACGGAGAAGTTTTCTTCCTCACAAACTCCCGTATTTTTTCATCGTGCTTTTGGAATTTCGCGAGTCTTCGGTTTGCAGCGCTAAGGGGGGTGTTTACTCTATTAGAGCTAATAAATGA Coding sequence (CDS) ATGTCAATTGAACAAAAAAATTTGGTATGCTCTGGCGTTCTCTCGCTCTGTTTTTTCATCATCGTCGACGTCAAAAGAGCTTTACAATTTCGATCACCGATAAAAGCATCAGCCGTGAGAGTTGTGTTCCGCCGTCGACGGAGAAGTTTTCTTCCTCACAAACTCCCGTATTTTTTCATCGTGCTTTTGGAATTTCGCGAGTCTTCGGTTTGCAGCGCTAAGGGGGGTGTTTACTCTATTAGAGCTAATAAATGA Protein sequence MSIEQKNLVCSGVLSLCFFIIVDVKRALQFRSPIKASAVRVVFRRRRRSFLPHKLPYFFIVLLEFRESSVCSAKGGVYSIRANK
Homology
BLAST of PI0004872 vs. ExPASy TrEMBL
Match: A0A0A0LFP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736790 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19 Identity = 60/84 (71.43%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 1 MSIEQKNLVCSGVLSLCFFIIVDVKRALQFRSPIKASAVRVVFRRRRRSFLPHKLPYFFI 60
MSIEQ F K LQFRSPIKASAVRV FRRRRR FL HKLPYFFI
Sbjct: 1 MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60
Query: 61 VLLEFRESSVCSAKGGVYSIRANK 85
VLLEFRESSVCSAK GVYSIRANK
Sbjct: 61 VLLEFRESSVCSAKEGVYSIRANK 84
BLAST of PI0004872 vs. NCBI nr
Match: KGN58931.1 (hypothetical protein Csa_001835 [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 3.8e-19 Identity = 60/84 (71.43%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 1 MSIEQKNLVCSGVLSLCFFIIVDVKRALQFRSPIKASAVRVVFRRRRRSFLPHKLPYFFI 60
MSIEQ F K LQFRSPIKASAVRV FRRRRR FL HKLPYFFI
Sbjct: 1 MSIEQSFRHALAFSRSVFSSSSTSKELLQFRSPIKASAVRVAFRRRRRIFLAHKLPYFFI 60
Query: 61 VLLEFRESSVCSAKGGVYSIRANK 85
VLLEFRESSVCSAK GVYSIRANK
Sbjct: 61 VLLEFRESSVCSAKEGVYSIRANK 84
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LFP6 | 1.8e-19 | 71.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736790 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN58931.1 | 3.8e-19 | 71.43 | hypothetical protein Csa_001835 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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