PI0003496 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAACGCTGACATACTAGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAGCGCATGGAGTCAATGGAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGAAGTTGCGTAATCAGTAA ATGACGAACGCTGACATACTAGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAGCGCATGGAGTCAATGGAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGAAGTTGCGTAATCAGTAA ATGACGAACGCTGACATACTAGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAGCGCATGGAGTCAATGGAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGAAGTTGCGTAATCAGTAA MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ Homology
BLAST of PI0003496 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.7e-14 Identity = 37/54 (68.52%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0003496 vs. ExPASy TrEMBL
Match: A0A5D3BL48 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00970 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.7e-14 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of PI0003496 vs. ExPASy TrEMBL
Match: A0A5A7VJX3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001490 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 5.7e-14 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of PI0003496 vs. ExPASy TrEMBL
Match: A0A5D3BQ11 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00510 PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.4e-14 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of PI0003496 vs. ExPASy TrEMBL
Match: A0A5A7U033 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00950 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.4e-14 Identity = 37/54 (68.52%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of PI0003496 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 37/54 (68.52%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of PI0003496 vs. NCBI nr
Match: KAA0067470.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of PI0003496 vs. NCBI nr
Match: TYJ99699.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of PI0003496 vs. NCBI nr
Match: KAA0033880.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK01264.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of PI0003496 vs. NCBI nr
Match: KAA0054126.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-13 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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